CHANGELOG.md

SOFA Changelog

v24.06.00

Full log

Highlighted contributions

• [GitHub] Add a python-based action managing discussions #4268
• [plugins] Update license to LGPL of remaining files #4425
• [LinearSystem] Introduce components to map matrices #4490
• [SofaSphFluid] Externalize SofaSphFluid #4526
• [LinearSystem] Introduce ConstantSparsityProjectionMethod #4552
• [HyperElastic] Introduce stable Neo Hookean hyperelastic material #4603
• [LinearSystem] Cache mapped mass matrix #4625
• [Constraint.Lagrangian] Add fixed lagrangian constraint #4646

Breaking

• [Type] RGBAColor: remove inheritance from type::fixed_array and use std::array to store its components #4263
• [All] ColorMap uses RGBAColor #4270
• [Type] Refactor Vec #4296
• [SolidMechanics.Springs] Cleaning of QuadularBendingSprings #4304
• [Topology.Container.Dynamic] GeometryAlgorithms: support generic State #4362
• [LinearSolver.Direct] Introduce other ordering methods in SparseLDL through Eigen #4370
• [Constraint.Lagrangian.Solver] Fix assert in GenericConstraintSolver #4389
• [Type] Refactor Mat #4396
• [LinearSystem] Detect changes in sparsity pattern when using ConstantSparsityPatternSystem #4428
• [Core][LinearSolver] Introduction of ordering method components #4477
• [Simulation.Graph] Move SimpleApi into its own library #4495
• [all] Lifecycle for v24.06 (2): remove Compat #4533
• [all] Add PenalityContact vector Data display #4637
• [GUI.Component] Add virtualization for attachment performer #4638
• [GUI.Qt] Some cleaning in qt RealGui #4641
• [FEM.HyperElastic] Convert string Data to OptionsGroup #4651
• [AnimationLoop] Remove duplicated Constraint Visitors #4715

Improvements

• [Lagrangian.Correction] Add callbacks to check zero compliance #4205
• [SolidMechanics.Spring] Implement buildStiffnessMatrix for TriangularBendingSprings #4295
• [SolidMechanics] Implement buildStiffnessMatrix for PolynomialSpringsFF #4301
• [Config] CMake: support interface-type target for install macro #4356
• [Core] BaseMapping: link mapConstraints to the "meta-alias" isMechanical #4360
• [github] Add new action checking PR age #4386
• [Topology.Mapping] Edge2QuadTopologicalMapping: use States directly #4388
• [README] Minor update badges #4417
• [StateContainer] Accelerate copy of MatrixDeriv for CRS matrices #4443
• [GitHub] Add new actions to connect GitHub and Discord #4445
• [All] Display reference name when pulling external plugins #4507
• [Config] Add TSAN option #4534
• [Project] Start dev phase v24.06 #4544
• [runsofa] Allowing multiple argv #4591
• [GUI] Add ConstraintAttachButtonSetting #4601
• [plugins] Add fetchable ModelOrderReduction #4608
• [GUI.Qt] Add clickable link to online documentation #4650
• [CMake] Start finding Qt6 then Qt5 #4686
• [examples] Use MeshMatrixMass in hyperelastic examples #4687

Bug Fixes

• [Geometry] Update method intersectionWithEdge signature and redirect all methods to it in EdgeSetGeometryAlgorithms #4194
• [SofaSPHFluid] Add option in ParticleSource to add/remove random values in the particles generation. Remove noise for CI scenes #4316
• [ODESolver] Fix compilation with SOFA_NO_VMULTIOP #4325
• [Topology.Mapping] Edge2QuadTopologicalMapping: use Links for required QuadSet components #4361
• [MultiThreading] Fix failing test on ParallelImplementationsRegistry #4392
• [Helper] Fix Colormap when using HSV to RGB #4408
• [All] Fix subplugin regression tests #4420
• [sofaInfo] Fix compilation and behavior #4422
• [Core] Call super init() in MultiMapping and Multi2Mapping #4432
• [Helper] Fix new[]/delete mismatch #4447
• [CMake] Fix SOFA install #4451
• [GitHub] Fix action using github.context #4456
• [Helper] PluginManager: Check symbol (real) location and avoid calling wrong entrypoint (Mac/Linux) #4466
• [GitHUb] Fix actions using cron condition #4468
• [GitHub] Fix PR messages not properly sent #4475
• [GitHub] Use finally pull_request_target #4476
• [SofaCUDA] Fix spatial grid compilation with double #4478
• [image] Fix compilation on Windows #4484
• [Testing] Fix installation of gtest headers #4489
• [Helper] PluginManager Fix test in debug #4491
• [Topology] Fix method isQuadDeulaunayOriented and its use in splitAlongPath #4494
• [GitHub] Fix review request Discord msg #4502
• [Simulation.Core] RequiredPlugin: Avoid calling loadPlugin() twice on start-up #4509
• [Share] Remove DefaultCollisionGroupManager in the default scenes #4521
• [all] Fix some warnings #4529
• [GitHub] Fix GH Discussions Announcements for Discord #4530
• [Simulation.Core] Make TSAN pass for caduceus #4535
• [Config] Add cxxopts cmake find module #4538
• [Sofa.Testing] Add SimpleApi in Config.cmake.in #4542
• [script] Stale action: remove temporary layer and activate closing #4560
• [README] Update link to Discord #4562
• [plugins] Add SimpleApi as a dependency in SofaCarving_test #4572
• [Constraint.Lagrangian.Solver] Make problemId counter id atomic #4581
• [Collision.Response.Contact] Make contactId thread-safe #4582
• [Collision.Detection] Give current intersection methods as parameter to intersection functions #4583
• [LinearAlgebra] Fix compilation of assert #4598
• [Multithreading] fix multithread packaging #4619
• [GitHub] Add timezone info on cron Actions #4626
• [LinearAlgebra] Trigger error on the Eigen version #4630
• [Core] Missing call to super init #4634
• [Demos] Fix regression for fallingBeamLagrangianCollision.scn #4643
• [Geomagic] Fix compilation. Replace Vector3 by Vec3 #4661
• [CollisionOBBCapsule] Fix duplicated registration in the factory #4709
• [Contact] Fix crash if collision models are not provided #4710
• [Engine.Analyze] Fix initialization of distance type #4711
• [SceneUtility] Initialize pointer to nullptr #4712
• [SofaCUDA] extern template instantiations #4714
• [image_gui] Make it a cleaner SOFA module #4719
• [SensableEmulation] Fix module name #4721
• [tests] Adapt code to any Eigen version #4724
• [image,Mapping.NonLinear] Properly includes config.h before ObjectFactory.h #4726
• [tests] Fix and test value type string of topology primitives #4732
• [MultiThreading] Fix module name in BeamLinearMapping_mt #4740
• [image_gui] Fix module name #4741
• [Analyze] Fix typos #4742
• [PlayBack] Add option to set period in the WriteStateCreator visitor #4744
• [Core] Missing closing brace #4753
• [Helper] Fix dl open when path are not canonical #4754

Cleaning

• [MechanicalLoad] Add buildStiffnessMatrix to TrianglePressureForceField #4294
• [Simulation.Core] Remove usage of ill-used nodeData in MechanicalGetNonDiagonalMassesCountVisitor and MechanicalVDotVisitor #4328
• [Simulation.Core] BaseMechanicalVisitor: Deprecate rootData #4350
• [LinearAlgebra] Use class template argument deduction with MatrixExpr #4351
• [LinearAlgebra] constexpr if statement when possible #4352
• [LinearAlgebra] Factorize template specializations of filterValues in CRS matrix #4355
• [CImgPlugin] Add fetchable CImg and remove embedded cimg #4357
• [Mapping.Linear] Replace a few beginEdit by accessors #4363
• [SofaSimpleGUI] Fix calls to deprecated functions #4390
• [Type] Remove test of a deprecated constructor #4391
• [Core] Remove pragma directive in cpp file #4393
• [All] Rename license file into LICENSE-LGPL.md to follow github repository rules #4410
• [SofaCUDA] Generalize the use of MessageDispatcher in SofaCUDA #4430
• [Core] Add documentation for the method BaseMapping::buildGeometricStiffnessMatrix #4431
• [LinearAlgebra] Factorize value filtering #4442
• [GitHub] Clean existing actions #4444
• [SofaCUDA] Initialize module from another module #4453
• [SofaDistanceGrid] remove shadow variable #4455
• [Defaulttype, LinearAlgera] Fix warnings #4465
• [Testing] Deprecate BaseSimulationTest::importPlugin #4467
• [All] CMake: Remove deprecation warnings #4469
• [framework] Fix typo #4474
• [all] Apply nested namespaces #4482
• [all] Missing override keyword #4483
• [all] Convert some loops to range-based #4485
• [Config] CMake: fix warning about upper/lowercase for Difflib #4486
• [README] Update badge with Discord #4498
• [Plugins] Move MeshSTEPLoader to an external repository #4504
• [Plugins] Gather external plugins configs in a same folder (proposal) #4505
• [image] Fix scene test #4517
• [GitHub] Update version of the actions/github-script #4522
• [GUI] Remove the New/Save/SaveAs menu options #4523
• [all] Additional fixes further to v24.06 lifecycle #4540
• [Core] Update NarrowPhaseDetection.cpp use prefix #4557
• [Geomagic] Update GeomagicDriver.cpp to fire error when hd.h is not found #4576
• [CMake] Upgrade cmake_minimum_required to 3.22 #4586
• [Core] Remove unused debug trace #4590
• [Core] cmake: Remove last traces of Sofa.Component.Compat #4596
• [LinearAlgebra] Remove empty source file #4599
• [Type] Clean and test MatSym #4600
• [tests] Use appropriate gtest macro #4607
• [LinearSystem] Remove development artifact #4620
• [all] Minor last fixes using SimpleApi #4627
• [SolidMechanics.FEM] Small update on container access to avoid unecessary check #4639
• [AnimationLoop] Rename Data #4664
• [Guidelines] Format cpp code #4695
• [all] Remove some warnings #4698
• [examples] Run PluginFinder on examples #4707
• [examples] Remove examples using DefaultCollisionGroupManager #4708
• [Core] Warn when module name is empty #4725
• [PlayBack] Update playback scenes to write/read and compare a beam under gravity motion #4745
• [tools] Factorize and clean plugin list filtering #4748
• [tools] Add new dependency to fix in MacOS post-install-fixup #4749
• [all] Fix typos in comments #4759
• [All] Delete v23.06 disabled header #4760
• [examples] Rename example scenes of constraints #4769

Refactoring

• [Constraint] Make name of constraints more explicit #4302
• [Constraint.Projective] Implement applyConstraint from new matrix assembly API #4309
• [Spring] Extract LinearSpring class in its own file #4454
• [VolumetricRendering][SofaCUDA] Move CUDA files related to VolumetricRendering #4487
• [DefaultType] Extract inner classes from SolidTypes in files #4513
• [LinearAlgebra] Refactor sparse matrix product #4547
• [plugins] Remove ExternalBehaviorModel and ManualMapping plugins #4565
• [LinearSystem.Direct] Remove metis dependency #4588
• [ODESolver] Explicit link to linear solver #4628
• [Collision.Detection.Algorithm] Rename Data #4674
• [Collision.Detection.Intersection] Rename Data #4675
• [Collision.Geometry+Response] Rename Data #4676
• [Controller+Engine] Rename Data #4678
• [IO] Rename Data #4679
• [ODESolver] Rename Data #4680
• [Playback] Rename Data #4681
• [Setting] Rename Data #4682
• [Topology] Rename Data #4683
• [Visual] Rename Data #4684
• [Constraint] Rename Data #4696
• [all] Rename depreciation macros in config.h.in for unique module id… #4755
• [examples] Rename FixedConstraint example #4764

Others

• [Helper] PluginManager: testing loading a plugin with a dependency on an other plugin #4464
• [Simulation] Tests: introduce multiple parallel simulations #4580
• [Simulation.Core] Remove useless and annoying timers #4631
• [image] Fix module name #4720
• [tools] Add metis relocation in post install fixup #4767

v23.12.00

Full log

Highlighted contributions

• [LinearAlgebra] Pull Insimo's CompressedRowSparseMatrix into the main branch #3515
• [plugins] Add fetchable SoftRobots #3882
• [Sofa.Simulation] First steps to remove the singleton Simulation #3889
• [plugins] ADD external collisions plugins #3890
• [LinearAlgebra] Implement CompressedRowSparseMatrixConstraint #3894
• [Simulation.Core] Refactor DefaultAnimationLoop + multithreading #3959
• [LinearSolver.Direct] Parallelization of H A^-1 H^T in SparseLDLSolver #3986
• [LinearSystem] Optim: Only account for affected DoFs #4001
• [GitHub] Action to check labels #4079
• [MultiThreading] Introduce parallel CG #4138
• [LinearSystem] Introduce constant sparsity matrix assembly #4158
• [LinearSolver] Implement parallel inverse product for all linear solvers #4255

Breaking

• [Constraint.Lagrangian] Activate the export of lambda forces by default #3857
• [all] Change variable name supportOnlySymmetricMatrix in MParams #3861
• [all] Unify how Animation/Visual loops are handling their "targetNode" #3945
• [MechanicalLoad] Implement buildStiffnessMatrix for PlaneForceField #3972
• [AnimationLoop] Change the default constraint solver in FreeMotionAnimationLoop #3994
• [Spring] Implement buildStiffnessMatrix in PolynomialRestShapeSpringsForceField #4009
• [MechanicalLoad] Remove the data force in ConstantFF and solves circular dependency #4019
• [all] Lifecycle v23.12 1/n #4034
• [Core] Make doDrawVisual final #4045
• [Visual] ADD a visualization flag and draw method for NarrowPhaseDetection #4048
• [SolidMechanics.TensorMass] Implement buildStiffnessMatrix for TetrahedralTensorMassForceField #4127
• [BatchGUI] Show progress bar #4168
• [Constraint.Lagrangian.Solver] Another step to factorize both constraint solvers #4213
• [all] Replace tinyxml by external tinyxml2 #4240

Improvements

• [all] Add namespaces in the factory and a python-like import mechanism #2512
• [IO][Tests] Add basic test for the MeshSTLLoader #2999
• [SofaCarving] Add an example written in python #3457
• [MultiThreading] Implement domain decomposition for a lock-free parallelism #3566
• [Components] Add functions to visualization of TetrahedronFemForceField #3821
• [LinearAlgebra] Change access specifier for the method set #3834
• [Mapping.NonLinear] Warns when non-symmetric matrix is produced #3838
• [Spring] Limit spring force to some axis #3849
• [Spring] Limit spring force to some axis #3850
• [Constraint] Add tag to classify constraints #3888
• [Spring] Rename RestShapeSpringsForceField to a more user-oriented name #3903
• [Mapping.NonLinear] Implement buildGeometricStiffnessMatrix for DistanceFromTargetMapping + example #3921
• [Config] Allow fast math mode for gcc/clang #3922
• [all] Use NVI design pattern for drawVisual #3931
• [all] Add DeprecatedData and RemovedData #3934
• [Helper] add the experimental filesystem library for gcc-8 compilation #3944
• [FEM.Elastic] Implement buildStiffnessMatrix in HexahedralFEMForceField #3969
• [Spring] Implement buildStiffnessMatrix for SpringForceField #3970
• [MechanicalLoad] Implement buildStiffnessMatrix for LinearForceField #3973
• [Collision.Response.Contact] Implement buildStiffnessMatrix in PenalityContactForceField #3974
• [FEM.Elastic] Implement buildStiffnessMatrix for TetrahedralCorotationalFEMForceField #3981
• [LinearSystem.Direct] More details in the error message #3985
• [FEM.Linear] Implement buildStiffnessMatrix and addKToMatrix for TriangularFEMForceField #3991
• [Spring] Implement buildStiffnessMatrix for AngularSpringForceField #3993
• [MechanicalLoad] Implement buildStiffnessMatrix for ConicalForceField #3997
• [MechanicalLoad] Restore computation of derivatives in DiagonalVelocityDampingForceField #3999
• [SofaCUDA] Implement buildStiffnessMatrix and buildDampingMatrix in TLED #4000
• [MechanicalLoad] Implement buildStiffnessMatrix in EdgePressureForceField #4004
• [MechanicalLoad] Implement buildStiffnessMatrix in EllipsoidForceField #4005
• [Spring] Implement buildStiffnessMatrix in FastTriangularBendingSprings #4006
• [MechanicalLoad] Implement buildStiffnessMatrix for OscillatingTorsionPressureForceField #4007
• [SolidMechanics] Implement buildStiffnessMatrix for QuadBendingFEMForceField #4015
• [MechanicalLoad] Implement buildStiffnessMatrix for QuadPressureForceField #4018
• [FEM.Elastic] Add option to compute principal stress direction in TriangularFEMForceFieldOptim #4027
• [Geometry] Add method isPointOnEdge in Edge structure #4028
• [Geometry] Add method intersectionWithEdge in Edge structure #4029
• [Geometry] Add methods getBarycentricCoordinates and isPointInTriangle in Triangle class #4053
• [examples] Introduce falling beam example #4055
• [all] Add dates for user deprecation classes RemovedData and DeprecatedData #4059
• [LinearSolver.Direct] More details in error message #4060
• [GitHub] Action to check PR titles #4081
• [MechanicalLoad] Implement buildStiffnessMatrix in SurfacePressureForceField #4097
• [MechanicalLoad] Implement buildStiffnessMatrix for SphereForceField #4099
• [FEM.Elastic] Implement buildStiffnessMatrix for TriangularFEMForceFieldOptim #4105
• [plugins] Add fetchable ShapeMatchingPlugin #4106
• [Constraint.Lagrangian.Correction] Decrease the severity of not finding a file in PrecomputedConstraintCorrection #4108
• [FEM.HyperElastic] Implement buildStiffnessMatrix for StandardTetrahedralFEMForceField #4110
• [MechanicalLoad] Implement buildStiffnessMatrix for TorsionForceField #4115
• [Mass] Add a callback on the lumping data in MMMass #4128
• [Constraint.Lagrangian.Solver] GenericConstraintSolver: use given re-ordered list for unbuilt GS #4132
• [Core] Store default value in a Data #4133
• [all] Use SimulationInitDoneEvent instead of AnimateBeginEvent #4160
• [GitHub] filter action if not on sofa-framework repository #4171
• [LinearSystem] Assemble non-mapped and mapped matrices in parallel #4172
• [Config] Integrate Tracy profiler #4182
• [Config] CMake: Dont check for IPO at every configure step #4191
• [Constraint.Lagrangian.Solver] GenericConstraintSolver: avoid repeated allocation in loops #4195
• [LinearSolver.Direct] Better distribution of tasks among threads #4220
• [all] Add the folder sofa-launcher to the resources component #4245
• [MatrixAccumulator] adds 6x6 matrix handling #4247
• [LinearAlgebra] Speedup accumulation on BTDMatrix #4248
• [LinearAlgebra] Support 6x6 matrices accumulation in BaseMatrix #4253
• [example] Speedup TorusFall with parallel inverse product #4256
• [Helper] ADD option to cmake for advanced timer #4259
• [LinearSystem] Speedup computation of Jacobian matrices #4317
• [FEM.Elastic] Reference instead of a copy in TriangularFEMForceField #4332
• [All] Add GIT_REF option for external plugins #4448
• [Testing] Externalize (find_package() or fetch) googletest/gtest #4471

Bug Fixes

• [test] Fix unit test on RestShapeSpringsForceField #3864
• [test] Fix failing unit test #3876
• [Constraint.Lagrangian.Solver] LCPConstraintSolver: Fix when mu=0 (no friction) #3905
• [applications] remove unused variable #3920
• [Projective] Fix and test FixedPlaneConstraint #3925
• [MechanicalLoad] Restore addKToMatrix and test SurfacePressureForceField #3935
• [Core.Topology] Restore invalid ids in invalid containers #3962
• [Sofa.Component] FIX default color for TetrahedronFEMForceField #3971
• [image] Fix crash in case no parameters provided to TransferFunction #3976
• [Mapping.NonLinear] Fix assert in RigidMapping #3978
• [Diffusion] Fix buildStiffnessMatrix in TetrahedronDiffusionFEMForceField #4012
• [Core] Fix drawing of Objects when hiding Visual Models #4044
• [FEM.Elastic] Compute BBox in triangle FEM #4061
• [FEM.Elastic] Fix typo in error message #4062
• [LinearAlgebra] Fix matrix sizes when filtering #4063
• [MechanicalLoad] Fix compilation further to new RemovedData constructor #4094
• [MechanicalLoad] Fix plane force field buildStiffnessMatrix #4098
• [GUI.Qt] Fix crash if filename is null #4102
• [Tutorials] Update and fix oneTetrahedron tutorial #4103
• [Helper] Fix wrong function called when writing jpg file #4111
• [test] Make quaternion test deterministic and portable #4126
• [Constraint.Lagrangian.Solver] Fix default value for computeConstraintForces Data #4129
• [Sofa.GL] Fix doDrawVisual for OglLabel #4142
• [SofaSphFluid] Fix: scenes warnings and failing examples #4149
• [SofaSphFluid] Fix: internal draw method not restoring default parameters #4150
• [Mass] Fix UniformMass vertexMass value should not be set to 0 if nbr of points reach 0 #4151
• [Topology.Grid] Fix SparseGridTopology and SparseGridRamificationTopology crash at init if mesh file is not found #4164
• [Topology] Rename Edge::pointBaryCoefs into Edge::getBarycentricCoordinates #4165
• [LinearSolver.Direct] SparseLDL: Fix crash in addJMInvJtLocal #4180
• [Helper] Fix warning in MeshTopologyLoader.cpp #4181
• [examples] Fix warning of UncoupledCC in caduceus #4187
• [LinearSystem] MatrixLinearSystem: add registration in the factory for BTDMatrix6 #4189
• [SofaCarving] Fix warnings in SofaCarving_test due to use of deprecated methods #4193
• [GUI.Qt] Fix libQGLViewer cmake install #4198
• [Helper] Update ComponentChange for MechanicalMatrixMapper #4235
• [LinearAlgebra] Robustify accesses to empty matrices #4236
• [Topology] Check indices out-of-bound in TriangleSetTopologyContainer #4242
• [github] Fix name of PR author in GitHub workflows #4267
• [SofaCUDA] Dont use both version of cublas (legacy or v2) #4274
• [Sofa.GUI.Qt] Add cmake module for QGLViewer #4290
• [all] Fix warnings #4291
• [LinearAlgera, Core] Fix linking with LTO on MacOS/Clang #4293
• [MultiThreading] Avoid Static Initialization Order Fiasco #4307
• [SofaCUDA] FIX compilation SofaCUDA along with SparseGrid with Cuda12 #4319
• [SofaAssimp] Fix the FindAssimp.cmake #4326
• [image] image_gui to compile with Qt6 #4330
• [Haption] Partially fix the plugin #4338
• [github] quick fix for GHD script #4347
• [github] fix stale action #4348
• [GUI] Fix compilation using QDocBrowser #4354
• [VolumetricRendering] Fix the compilation #4398
• [VolumetricRendering] Fix crashes in batch mode #4436
• [LinearSolver.Direct] Fix metis dependency #4450
• [Simulation.Common] Fix tinyXML2 install for windows #4525
• [all] Install FindTinyXML2 #4545
• [cmake] Remove error in Findcxxopt #4554
• [GUI.qt] Set link to tinyxml2 to PRIVATE and fix config file #4558
• [Config] Fix findcxxopt when version is not specified #4564
• [Config] Fix Findmetis module when using config mode #4570
• [all] Fix tinyxml2 dependency #4574

Cleaning

• [plugins] Remove fetching of SofaPython #3855
• [Constraint.Lagrangian] Add messages when no compliance is given #3858
• [all] include base class inl file #3865
• [SofaCUDA] No longer use deprecated texture references in HexaTLED #3868
• [SofaCUDA] Deprecated CudaTexture.h #3869
• [Config] Fix cross-compilation for embedded external libs #3870
• [all] Deprecate unused verbose data #3871
• [contact] Add missing call to super init #3884
• [examples] Fix unstable scene constantMomentum.scn #3886
• [SolidMechanics] Use accessors & make geometrical data required in BFF #3887
• [SofaCUDA] Replace deprecated vector types #3902
• [Helper] Improve text message for users in ComponentChange #3913
• [all] Minor clean of types #3915
• [examples] Remove example for MechanicalMatrixMapper #3919
• [MechanicalLoad] Replace doUpdateInternal by callback: ConstantFF #3924
• [FEM.Elastic] Implement buildStiffnessMatrix for FastTetrahedralCorotationalForceField #3929
• [all] Cosmetic: apply nested namespaces style #3932
• [Helper] Properly deprecate an already deprecated function #3933
• [all] Make local variables const #3937
• [Tests] Properly remove exported files #3942
• [all] Remove few lines of code that do nothing #3946
• [all] Implement empty buildDampingMatrix #3948
• [IO.Mesh] More debug info in the error message in MeshSTLLoader #3949
• [Sofa.Simulation] Remove Node::bwdInit #3954
• [Mapping/tests] Remove dependency on SceneCreator #3955
• [Simulation.Core] Deprecate unused classes *VisitorScheduler #3957
• [Helper.System] Introduce function append for paths #3961
• [Project] Start dev phase v23.12 #3963
• [all] Minor clean on indentation and warning #3975
• [MechanicalLoad] Remove empty draw function in LinearForceField #3979
• [tests] Restore commented unit tests #3982
• [CHANGELOG] Update further to latest changes in v23.06 #3998
• [Component] Follow changes from SOFA #3889 #4013
• [LinearAlgebra] CompressedRowSparseMatrix: add virtual destructor #4020
• [GuiQt] Remove some unactivated code #4025
• [constraint] Update PrecomputedConstraintCorrection logs when loading compliance file #4026
• [all] Lifecycle v23.12 2/n #4040
• [GUI.Qt] Remove unused recorder feature #4041
• [MechanicalLoad] Use prefix d_ in DiagonalVelocityDampingForceField #4046
• [all] Lifecycle v23.12 3/n #4056
• [all] Clean unused warnings in SOFA #4057
• [all] Lifecycle v23.12 4/n #4058
• [plugins] Fix OptionGroup deprecated constructor in image and SofaCUDA plugin #4064
• [all] Update code regarding lifecycle in Topology.h #4065
• [all] Fix warnings related to Vec and unused var #4067
• [all] Remove some simple uses of bwdInit() #4075
• [SofaMatrix] Remove CImgPlugin dependency #4112
• [all] Replace deprecated wbloc function by its new function name #4118
• [Core] VecId: set correct message for the deleted function holonomicC #4120
• [IO.Mesh.Tests] Reduce number of logs by unactivating printlog #4148
• [Constraint.Lagrangian.Solver] LCPConstraintSolver: remove useless computation if printLog is enabled #4170
• [Scene] Eigen3-SVD.scn: disable printLog #4184
• [Constraint.Lagrangian.Solver] Clean both constraint solvers #4185
• [Topology.Container] Update and rename methods in EdgeSetGeometryAlgorithms to compute barycentric coordinates #4190
• [Topology.Container] Remove method writeMSHfile in GeometryAlgorithms components #4192
• [all] Fix mismatch on explicit template instantiations #4210
• [SofaCUDA] Move cuda GUI dependent code #4227
• [all] Forgotten scoped timers #4237
• [all] Fix warnings #4238
• [all] Remove TODO.md #4244
• [Type, Helper] Remove unused __STL_MEMBER_TEMPLATES parts #4251
• [GL] Remove deprecated (and incomplete) Color class #4264
• [FEM, Mapping] dont mix type::fixed_array and type::Vec #4269
• [all] Fix headeronly extlibs licenses #4272
• [all] Externalize cxxopts #4273
• [Topology.Mapping] SimpleTesselatedHexaTopologicalMapping: use correct type for Index #4279
• [GUI.Qt] Minor single-line cleaning #4308
• [Core] Minor clean of DefaultAnimationLoop #4314
• [Collections] Remove reference to non-existing SofaSimulation #4320
• [All] Changed default plugins #4322
• [ODESolver.Backward] Convert double to SReal in NewmarkImplicitSolver #4341
• [Sofa.Testing] Do not build Sofa.Testing if SOFA_BUILD_TESTS is OFF #4459
• [Simulation.Common] Fix downstream project compilation with tinyXML2 #4506

Refactoring

• [Sofa.Core] minor refactoring for Data::read() to move into BaseData the reading code #3278
• [all] Rename DefaultContactManager into CollisionResponse #3891
• [FEM.Elastic] Minor refactor of buildStiffnessMatrix in TetrahedronFEMForceField #3983
• [plugins] Remove PSL files, add ExternalProjectConfig and update CMakeLists #4047
• Revert "[Sofa.Core] minor refactoring for Data::read() to move into BaseData the reading code" #4068
• [MechanicalLoad] Implement buildStiffnessMatrix for TaitSurfacePressureForceField #4116
• [Constraint.Lagrangian.Solver] Unify lists of constraint corrections into a MultiLink #4117
• [Constraint.Projective] Implement applyConstraint in LinearMovementConstraint #4144
• [all] Generalize the usage of ScopedAdvancedTimer #4177
• [all] Replace ScopedAdvancedTimers by macros #4203
• [LinearSolver] Remove CSparse-based linear solvers #4258
• [Common] Add message to make the fetch mechanism less hidden #4310
• [Simulation.Core] Deprecate LocalStorage feature #4327

v23.06.00

Full log

Highlighted contributions

• [LinearSystem] Refactor matrix assembly #2777
• [Core] Introduce parallel for each #3548
• [MultiThreading] Introduce ParallelTetrahedronFEMForceField #3552
• [examples] Apply Sofa/Component structure for all examples #3588

Breaking

Architecture

• [all] Lifecycle v23.06 1/n #3634
• [all] Lifecycle v23.06 2/n #3649
• [all] Lifecycle v23.06 3/n #3654
• [all] Lifecycle v23.06 4/n #3655
• [Core] Use std::function for Link's Validator (and fix UB) #3665
• [Helper] Improve OptionsGroup #3737
• [Simulation] Suggest required plugin in the syntax of the scene loader #3799

Modules

• [Mapping] Adds template to RigidMapping #3680
• [Analyze] Raw pointers to Links #3683
• [MechanicalLoad] Stupid check for consistency between state and topology #3692
• [Mapping.NonLinear] Geometric stiffness method in an OptionsGroup #3740
• [Core.Visual, Component.Visual] Create VisualState (formerly Vec3State) #3782

Plugins / Projects

• [MultiThreading] Factorize task scheduler user #3607

Improvements

Architecture

• [Helper] Use DataTypeInfo in NameDecoder #3465
• [DefaultType] RigidCoord/Deriv become iterable #3536
• [Core] Give threads a name on Windows #3551
• [Core] Display flags spelling suggestion #3575
• [Type] Construct matrices based on initializer-lists #3584
• [defaulttype] Template aliases for CRS matrices #3592
• [Simulation] SceneCheck can be added in plugins #3597
• [Contributing] Update file to mention good first issue #3625
• [Simulation] Error when trying to load a non-existing file #3677
• [all] Give reason when component cannot be created #3682
• [Type] Support structured binding for type::fixed_array #3753
• Update CONTRIBUTING.md #3774

Modules

• [Collision.Response.Contact] Implement addKToMatrix for PenalityContactForceField #3626
• [Mapping.NonLinear] Implement missing applyJT #3776
• [Constraint] Add data to access constraint forces in LCPCS #3796
• [Rendering3D] OglModel: Use glMapBufferRange to update buffers #3822
• [Logging] Suggestion to better highlight warnings in console #3914

Plugins / Projects

• [Multithreading] 2 steps to maximize coalescing memory access #3572
• [MultiThreading] Parallel springs #3596
• [MultiThreading] Prepare data for rendering in parallel #3599
• [MultiThreading] Implement addDForce in ParallelStiffSpringForceField #3668
• [SofaCUDA] Add missing templates for Cuda MechanicalObject #3688
• [SceneChecking] Add check when setting contactStiffness uselessly #3843

Examples / Scenes

• [example] Introduce an example for DistanceMultiMapping #3742
• [examples] Introduce examples for DistanceMapping and SquareDistanceMapping #3756

Bug Fixes

Architecture

• [Simulation.Graph] SimpleAPI: Remove reference to Node argument in createChild() #3620
• [defaulttype] Fix cuda template instantiation #3646
• [Core] Fix UB (misaligned address) when comparing string #3664
• [Helper, GL] Fix various memleaks #3671
• [Helper] ArgumentParser: Fix map insertion when parsing more than once #3672
• [Defaulttype] Add generic precision aliases for Mat templates #3675
• [Config] Disable SOFA_EXTERN_TEMPLATE #3678
• [all] Simple robustification #3685
• [Helper] Fix FileRepository::relativeToPath #3693
• [Core] Fix MSVC warning in Link #3763
• [Core] Access cumulative sum of VecIds through proxy class #3918

Modules

• [GUI] Fix CMake Packaging #3595
• [Component.Engine] Replace some explicit instanciations on double with SReal #3629
• [Topology.Container.Grid] RegularGrid: Fix rounding errors with SReal=float #3636
• [Collision.Geometry] Fix transparency while displaying the Bounding Collision Cubemodel #3658
• [MechanicalLoad] Fix ConstantForceField when no force given #3670
• [Collision] Make the (CubeModel) BoundingTree deterministic #3687
• [IO.Mesh] Fix UB when filename is empty #3689
• [FEM.Elastic] Check for nullptr in BeamFEMForceField #3690
• [Spring] Check for nullptr in RestShapeSpringsForceField #3691
• [Testing] Fix CMake config after removal of compat #3694
• [LinearAlgebra] Fix crash when matrix has no nonzero values #3700
• [IO.Mesh] Fix mesh creation if load called multiple times #3702
• [LinearSolver.Direct] Make sure the matrix is factorized in SparseCholeskySolver #3706
• [GUI.Qt] Register meta type to fix asynchronous Qt call #3749
• [Tests] S.Components tests compiles with SReal=float #3755
• [Mapping.NonLinear] Fix SquareMapping applyDJT #3761
• [LinearAlgebra] Restore insertion operator for BaseVector #3775
• [StateContainer] Fix bug in dynamic data registration #3783
• [Rendering3D] Missing StateLifeCycle #3784
• [Mapping.Nonlinear] Fix matrix assembly in RigidMapping #3803
• [Visual] VisualModelImpl: Fix updateVisual() #3815
• [LinearSolver.Iterative] CMake: Fix package configuration #3840
• [Rendering3D] OglModel: Revert back to glBufferSubData #3841
• [SolidMechanics.Spring] CMake: Fix package configuration #3846
• [Spring] Remove unused dependencies #3848
• [FEM.Linear] FIX & Minor refactor of buildStiffnessMatrix in TriangleFEMForceField #3989

Plugins / Projects

• [SofaEulerianFluid] Fix: rename shadow variable in Fluid2D #3561
• [MultiThreading] ParallelBruteForceBroadPhase: Fix assertion error #3574
• [image] Fix Sofa.GUI dependency #3591
• [SofaCUDA] Missing support for double precision floating-points #3603
• [SofaPhysicsAPI] Fix compilation by replacing use of SofaGUI by sofa::GUI::common #3612
• [SofaCUDA] No longer use deprecated texture references in TetraTLED #3650
• [MultiThreading] Empty string instead of null pointer in DataExchange #3686
• [Geomagic] Fix potential crash at exit when device has not been init #3698
• [SofaCUDA] Fix includes pointing to compatibility layer #3727
• [plugins] ArticulatedSystemMapping : adds size check & fixes typo #3751

Examples / Scenes

• [All] Fix example scenes showing warnings or errors #3526
• [all] Update totalmass to totalMass #3622

Scripts / Tools

• [CI, Scenes] Restore custom parameters for the scene-tests #3674

Cleaning

Architecture

• [all] Lifecycle v22.06 #3535
• [Type] Quat: small optimization for axisToQuat() #3559
• [Config] Remove unused SOFA_WITH_THREADING option #3565
• [Project] Start v23.06 dev phase #3573
• [Cmake] Update warning replacement message for deprecated macro sofa_add_XX #3611
• [Sofa] Remove warnings #3627
• [Sofa.framework] Compile and run tests when SReal is float #3628
• [Type] Fix massive warning due to Mat.h #3633
• [Core] TLink: Fix warnings about comparisons between unnamed enums #3714
• [Helper] Deprecate constructor of OptionsGroup #3741
• [Config] Remove suspicious Eigen macro preventing vectorization #3780

Modules

• [StateContainer] Avoid code duplication in MechanicalObject #3541
• [FEM.Elastic] Fix unit tests warnings #3545
• [GUI] GUI libraries as plugins #3550
• [LinearAlgebra, LinearSolver.Direct] make getSubMatrixDim() compile-time constant #3556
• [FEM.Elastic] Consistent default values for poisson's ratio and Young's modulus #3563
• [FEM.Elastic] Minor refactoring and optimization in draw #3564
• [all] Fix some warnings further v22.12 #3570
• [LinearAlgebra] Remove wrong comment #3582
• [LinearAlgebra] Factorize rotateMatrix in RotationMatrix #3586
• [Mass] Remove empty loop in addForce #3593
• [Spring] Remove duplicated code #3594
• [Components] rename shadow variable #3606
• [Helper,Geometry] Move proximity classes into free functions #3666
• [all] Remove a bunch of warnings #3711
• [Spring] Remove variable redefinitions #3754
• [AnimationLoop] Call super init in FreeMotionAnimationLoop #3791
• [Hyperelastic] Reformat files and add override attribute #3792
• [Visual] VisualModelImpl: Clean and optimize slightly ComputeNormals() #3805
• [Constraint] Change print variable names to be consistent with doc #3816
• [Components] rename shadow variable #3818
• [All] Remove trivial warnings #3823
• [Lagrangian.Model] Missing _API keyword #3833
• [All] Remove warnings for v23.06 #3911

Plugins / Projects

• [plugins] rename shadow variable #3581
• [SofaCUDA] Clean removed code and add useful one #3632
• [GUI.Qt, Multithreading] Fix compilation when SReal=float #3637
• [MultiThreading] Remove obsolete documentation #3667
• [Multithreading] Fix AnimationLoopParallelScheduler #3676
• [SofaCUDA] Remove BeamLinearMapping<Rigid3fTypes,.> #3684
• [GUI.Qt] Clean and fix in the "inspector" panel #3713
• [applications] rename shadow variable #3738
• [SofaPhysicsAPI] Remove unreachable code #3771
• [SofaCarving] Refresh : update file architecture and cmake #3798
• [BulletCollisionDetection] Revive project #3800
• [PreassembledMass] Make it external #3802
• [SofaCUDA] Move explicit template instantiations from CudaTypes.cpp to CudaMultiMapping.cpp #3807
• [plugins] Remove references to old plugins #3960
• [plugins] Remove references to external deleted plugins #3980

Examples / Scenes

• [Tutorials] Fix CMake with Sofa.GUI #3624
• [Scenes] Use "floating-point type"-independent templates #3635
• [examples] Apply rest position in mappings #3757

Refactoring

Modules

• [Collision.Detection] Rename DefaultPipeline into CollisionPipeline #3590
• [Mapping.NonLinear] Move DistanceMultiMapping in its own files #3707

Plugins / Projects

• [MultiThreading] Reorganize following SOFA structure #3598
• [SofaCUDA] Reorganize following SOFA structure (1/n) #3601
• [SofaCUDA] Reorganize following SOFA structure (2/n) #3605
• [SofaCUDA] Reorganize following SOFA structure (3/n) #3660
• [SofaCUDA] Reorganize following SOFA structure (4/n) #3701
• [SofaCUDA] Reorganize following SOFA structure (5/n) #3758
• [SofaCUDA] Reorganize following SOFA structure (6/n) #3760
• [SofaCUDA] Reorganize following SOFA structure (7/n) #3785
• [SofaCUDA] Reorganize following SOFA structure (8/n) #3795

Tests

Modules

• [Solver.Direct] Unit test on topological changes leading to empty system #3501
• [LinearAlgebra] Unit tests for RotationMatrix #3585
• [LinearAlgebra] Fix matrix unit test #3832

Examples / Scenes

• [examples] Introduce example and tests for SquareMapping #3768

v22.12.00

Full log

Highlighted contributions

• [Core, Helper] Add spelling suggestion in ObjectFactory #3042
• [Constraint.Lagrangian] Add the NNCG as NLCP solver in GenericCS #3053
• [CMake] Introduce CMake presets #3305
• [all] Type conversion cleaning (+ user-defined literal) #3314
• [Core] Convert warning to error in object factory #3404

Breaking

Architecture

• [Core] Make some functions non-virtual #3242
• [Core] Add some const qualifier to collision methods & use SReal & nodiscard. #3270
• [Topology] Improve TopologyHandler registration #3271
• [Core] Finally disable deprecated code in BaseData and ExectParam's Aspects. #3279
• [Simulation] Separate factory code from TaskScheduler #3480
• [all] Replace all Vector2, Vector3, Vector4 by their short name alias Vec2, Vec3 #3299
• [Core] Remove memory leaks #3183
• [Core] Avoid extra copy in DataFileNameVector #3188

Modules

• [Constraint.Lagrangian] Create data links in ConstraintCorrection for linear solver #3152
• [LinearSolver] Create data links for preconditioners and ShewchukPCGLinearSolver #3155
• [Constraint.Lagrangian] Fix BilateralInteractionConstraint double init and clean some Data #3327
• [Constraint.Lagrangian] Remove merge option from BilateralInteractionConstraint #3328
• [Constraint.Lagrangian.Solver] Deprecate MechanicalAccumulateConstraint #3393
• [TriangularFEMForceField] Avoid double write access to the TriangleInfo Data in TriangularFEMForceField #3412
• [all] Fix compilation with float as floating_point_type #3435

Improvements

Architecture

• [Core] Linear time getRoot() method in BaseNode and Node #3059
• [Type] Add NoInit constructor for Quat class #3217
• [Geometry] Make global variables constexpr #3233
• [Core] Reduce calls to getValue in collisions #3264
• [Type] Fix/clean and speed up of Mat #3280
• [Type] Add fixedarray aliases and BoundingBox3D #3298
• [Config] Option to set the number of MSVC processes #3313
• [Helper] RAII for DrawTool state life cycle #3338
• [Config] Option to enable interprocedural optimization #3345
• [Config] Change type of CMake message when adding a module #3381
• [CMake] Speed-up Configuration (again) #3382
• [Helper] Portable thread local storage duration #3422
• [Helper.Accessor] Support more std vector methods in WriteAccessorVector #3426
• [Topology] Add mechanism to check checkTopologyInputTypes #3428
• [Topology.Container] Check at init for Container in Modifier #3434
• [Simulation] Task scheduler can accept callable #3482
• [Simulation] Worker threads are no longer static #3491
• [Core] Support getObjects on set containers #3495
• [Type] Conversion to scalar for Mat1x1 #3498
• [VectorTypeInfo] Change default handling of data buffer #3505

Modules

• [MappedMatrix] MechanicalMatrixMapper: adds option #3173
• [Constraint.Lagrangian.Correction] LinearSolverCC: use FullVector API if detected #3231
• [Topology_test] Add tests in EdgeSetTopology_test to check topological changes #3245
• [SolidMechanics][Spring] Implement applyRemovedEdges for SpringForceField #3269
• [StateContainer] Optimize vector operations #3284
• [Mapping.Linear] Add support for 2d in SubsetMultiMapping #3321
• [Constraint.Lagrangian] Update BilateralInteractionConstraint to support topological changes #3329
• [all] Unit tests for getTemplateName in some components #3380
• [all] Implement getModuleComponentList for most modules #3386
• [Constraint.Lagrangian.Solver] Add events in the constraint solver pipeline #3418
• [FEM.Elastic] Speedup hexa drawing in force field #3420
• [Visual] Introduce TrailRenderer #3471
• [Solver.Direct] Unit tests on empty system #3500
• [MechanicalLoad] Move getValue call out of the loops #3503

Plugins / Projects

• [SofaCUDA] Add ConstraintCorrection instantiation in CudaVec3f/CudaVec3f1 #3004
• [SofaCUDA] Make CudaConstantForceField compatible with CudaRigid types #3164
• [GUI.performer] Add remove elements function for LineCollisionModel #3239
• [Regression] Test Eigen solvers scenes for regression #3326
• [Regression] Add HexahedronFEMForceFieldAndMass to regression tests #3367
• [SofaCarving] Update and add more tests in SofaCarving_test #3407
• [SofaCuda] Add method in CudaVector Accessor and CudaBilateralInteractionConstraint #3460
• [SofaPhysicsAPI] Add several methods using output parameters #3520
• [SofaPhysicsAPI] Add C bindings to access C++ api #3539
• [SofaPhysicsAPI] Add methods and C bindings to load SOFA ini file, plugins and messageHandler #3540

Bug Fixes

Architecture

• [Config] Rename ide folder for libraries #3214
• [CMake] FIX parent modules library consistency #3225
• [CMake] FIX out-of-tree SofaGui and runSofa locations #3229
• [Sofa.Type] Fix compile-time Mat and Vec #3281
• [Simulation.Core] Fix import of required plugins #3322
• [Topology] Fix internal infinite update loop in TopologySubsetData remove process #3330
• [Topology] Update getLastElementIndex in TopologySubsetIndices #3331
• [Core.Collision] Fix memory leak in NarrowPhaseDetection and IntersectorFactory #3337
• [Type] Remove explicit template instantiation to restore performances #3349
• [Topology] Fix topologyHandler removal #3369
• [Mapping.Linear] Fix assert #3432
• [DefaultType] fix rigidcoord compilation #3462
• Revert "[Sofa.Core] Linear time getRoot() method in BaseNode and Node" #3464
• [Sofa.Core, SofaSphFluid] Fix compilation with MSVC 2022, v17.4 #3466
• [Simulation.Core] Add the _API flag to Task::Status #3543
• [Core] Missing include in SingleStateAccessor #3547
• [Helper] Fix GenerateRigidMass redirection #3560

Modules

• [Topology] Fix initTopology call chains for mesh without topology #3216
• [Constraint.Lagrangian.Solver] fixes verbose GenericConstraintSolver #3232
• [SolidMechanics] Fix draw in MeshSpringForceField #3235
• [Constraint.Lagrangian] Make class abstract and add key function #3240
• [SolidMechanics.Spring] RestShapeSpringForceField: Fix addKToMatrix #3249
• [all] Split Tag & TagSet into separated files and fix missing includes. #3277
• [all] Minor warning fixes #3306
• [LinearSolver.Direct] Missing call to super init() #3316
• [LinearAlgebra] Fix BDT compilation #3333
• [BarycentricMappers] Fix potential division by 0 #3383
• [Engine.Analyze] ClusteringEngine: set correct values in load() #3398
• [Tests] Update tests to new modules #3406
• [Tests] Fix mutiple component init calls in several tests #3447
• [image, FEM, LinearSolver] fix Eigen3 assertion with SVD #3452
• [Constraint.lagrangian] Update BilateralInteractionConstraint namespace #3468
• [Topology.container] Fix missing TopologyElementType setting in SparseGridTopology init #3475
• [LinearSolver.Direct] Fix crashing unit tests #3512
• [LinearSolver.Direct] Segfault in SparseLDLSolver due to empty system matrix #3529
• [Tests] Update required plugins in tests #3542

Plugins / Projects

• [SofaCUDA] FIX namespaces #2935
• [Plugins] Fix Cmake configuration w/o compat #3209
• [GUI.Qt] Fix MSAA sampling setup #3220
• [DrawToolGL] Fix ill-formed drawLines with multiple colors #3260
• [SofaSphFluid] Fix required plugin in scenes #3272
• [SofaCarving] Fix bug in CarvingManager when searching for target collision model #3276
• [GUI/runSofa] Cmake: tweaks and fixes #3323
• [CImgPlugin] Replace new keyword with creating unique pointers to properly clean up allocated memory. #3365
• [SofaMatrix] Fix crash if init fails in FillReducingOrdering #3366
• [SofaDistanceGrid] Set invalid state if cannot load mesh #3400
• [SofaMatrix] Update plugin CMakeLists to avoid strong dependency on Qt #3423
• [SofaNewmat] Fix modules #3427
• [plugins] Fix warnings in SofaSphFluid and image #3439
• [GUI.Qt] Restore QGLViewer for Qt6 #3454
• [GUI.Qt] Restore Stats (Charts) and DocBrowser for Qt6 #3456
• [Modeler] rename shadow variable #3546
• [GUI.Common] Cmake: Fix message when searching for Sofa.GL #3549
• [SofaEulerianFluid] Fix: rename shadow variable in Fluid3D #3557
• [CollisionOBBCapsule] Fix generation of configuration file for installation #3576

Examples / Scenes

• [Examples] Fix & Clean ProjectToPlaneConstraint and RegularGridTopology_dimension scenes #3453

Cleaning

Architecture

• [Core] Minor cleaning #3176
• [objectmodel] Remove redefinition of initData #3190
• [Sofa.Core] Remove shadow variables #3212
• [Sofa.Type] Constexpr Quaternion #3221
• [Helper] Reorganize accessors files and add tests #3234
• [Sofa.DefaultType] Constexpr VecTypes and RigidTypes #3237
• [Sofa.Core] Remove compilation warning because of un-used argument in BaseClass.h #3243
• [Topology] Remove Disabled and Deprecated method <= 22.06 #3250
• [Core][Type] Minor warning fixes #3283
• [Sofa.Defaulttype] Move Rigid{Coord, Deriv, Mass} from RigidTypes into their own headers #3282
• [Sofa.Core] Add missing #include #3297
• [Sofa.Core] Use pragma, single line namespaces and move forward declarations in fwd.h #3303
• [Sofa.Core] Remove the use of Link in MechanicalParams & ConstraintParams #3304
• [Type] Disable deprecated methods #3346
• [Type] Deprecate Color.h #3347
• [Type] equalsZero returns bool, not a real #3371
• [Helper] Deprecate error-prone resize and add emplace_back #3373
• [Simulation] Change LoadFromMemory signature to remove unused parameter Size #3376
• [Sofa.Core] VecId: move definition of VecTypeLabels in its own Translation Unit #3401
• [Sofa.Core] TagSet: move method definitions in cpp #3403
• [Sofa.Config] CMake: Remove "both" as a choice for SOFA_FLOATING_POINT_TYPE parameter #3436
• [Simulation.Core] Clean Multithreading code #3448
• [Core] Minor cleaning #3492

Modules

• [all] Remove code disabled in v21.06 #3163
• [Spring] RestSpringsForceField: Unify Vec/Rigid implementation #3175
• [LinearSolver.Direct] BTDLinearSolver: Clean debug informations and rename data #3226
• [all] Set of warning fixes #3227
• [All] Remove deprecation warnings while building the deprecated thing itself #3236
• [LinearAlgebra] Remove deprecated code #3251
• [tests] Fix remove SofaComponentAll plugin which doesn't exist anymore #3266
• [Test] Remove the output of a test from file versioning #3285
• [Collision] Cleaning pass on types #3287
• [S.C.MechanicalLoad] PlaneForcefield: Fix "potential divide by zero" warnings in msvc #3315
• [LinearAlgebra] Explicit instantiations and extern template for some matrices #3334
• [Mapping] Add checks at init in TopologicalMapping #3339
• [Topology.Container.Grid] trivial optimization in GridTopology #3348
• [All] Reduce calls to getValue #3356
• [all] Remove in-class typedefs pointing to common sofa::type #3357
• [Lagrangian.Solver] Move MechanicalGetConstraintResolutionVisitor in its own files #3390
• [Lagrangian.Solver] Move MechanicalGetConstraintViolationVisitor in its own files #3391
• [Lagrangian.Solver] Move ConstraintStoreLambdaVisitor in visitors folder #3392
• [Topology.Mapping] Types cleaning in Edge2QuadTopologicalMapping #3408
• [SolidMechanics.FEM] Clean and optimise TriangularFEMForceField draw method #3413
• [Topology.Mapping] Replace all beginEdit by writeAccessor to access Loc2GlobMap #3429
• [All] Fix unnecessary copy to access topology buffer when const ref can be used #3446
• [Lagrangian.Solver] Merge duplicated code into small but expressive functions #3474
• [all] Remove compilation warnings #3494
• [FEM.Elastic] Clean draw method #3508
• [all] Lifecycle v22.12 #3534

Plugins / Projects

• [tutorials] Fix CMakeLists targets #3200
• [Project] Start v22.12 dev phase #3218
• [SofaImplicitField] Fix CMake for new NG architecture #3223
• [SofaValidation] is a plugin, not a collection #3296
• [SofaSimpleGUI] Without compatibility layer #3301
• [ExternalBehaviorModel] Without compatibility layer #3302
• [SofaCarving] Some cleaning in carvingManager to use link instead of string and clean warning in scenes #3332
• [image] Fix CMake warning from deprecated function #3359
• [SofaDistanceGrid] Clean examples #3399
• [image] Remove example scenes requiring Flexible plugin #3421
• [GL.Rendering3D] OglModel: Minor cleanups #3417
• [MultiThreading] Clean file format #3476
• [applications] remove shadow variable #3488
• [plugins] SofaCUDA does not require Sofa.GL #3514
• [SofaPhysicsAPI] Some small cleaning and add access to VisualModel* #3519

Examples / Scenes

• [examples] Another pass of plugin finder #3351

Scripts / Tools

• [metis] Upgrade metis and GKlib #3063
• [git] Add various temporary files to .gitignore #3344

Refactoring

Architecture

• [Sofa.Core] Move operator<<(Data&) into operator<<(BaseData). #3300

Modules

• [Lagrangian.Solver] Move GenericConstraintProblem in its own files #3396

v22.06.00

Full log

SOFA-NG

Architecture

• [SofaNG] Dispatch SofaHaptics and SofaValidation #3041
• [SofaNG] Dispatch useful SofaMiscCollision components into S.C.Collision #2896
• [SofaNG] Re-organize Framework #2876
• [SofaNG] Re-organize unit tests #2873
• [SofaNG] Setup AnimationLoop #2797
• [SofaNG] Setup Collision #2813
• [SofaNG] Setup Constraint #2790
• [SofaNG] Setup Diffusion #2753
• [SofaNG] Setup Engine #2812
• [SofaNG] Setup GUI #2895
• [SofaNG] Setup IO #2582
• [SofaNG] Setup LinearSolver #2717
• [SofaNG] Setup Mapping #2635
• [SofaNG] Setup Mass #2752
• [SofaNG] Setup MechanicalLoad #2783
• [SofaNG] Setup SceneUtility #2605
• [SofaNG] Setup Setting and Controller #2843
• [SofaNG] Setup Sofa.GL (as a plugin) #2709
• [SofaNG] Setup SolidMechanics #2759
• [SofaNG] Setup StateContainer #2766
• [SofaNG] Setup Topology #2612
• [SofaNG] Setup Visual #2679
• [SofaNG] Setup cmake and add ODESolver #2571

Modules

• [Sofa] Compilation without Compatibility mode #2975
• [Component.Compat] Remove wrong mappings in compat layer #2705
• [S.C.Engine.Generate] Convert and move MeshTetraStuffing as an engine #2917
• [Sofa.Component.ODESolver] Gather tests + create Sofa.Component.ODESolver.Testing #2650
• [Sofa.Component] Remove empty test projects and move/clean tests from SofaBoundaryCondition #2991
• [Sofa.GUI] Clean CMake variables #2974
• [Sofa.Helper] Refresh ComponentChange info list #2986
• [Sofa.Helper] clean ComponentChange and add new category #2565
• [SofaGraphComponent] Move scene checking ability into its own library #2960

Plugins / Projects

• [PluginExample] Move the plugin to an external repository #2519
• [ManifoldTopologies] Move the plugin to an external repository #2623
• [OpenCTMPlugin] Move the plugin to an external repository #2564
• [OptitrackNatNet] Move the plugin to an external repository #2548
• [THMPGSpatialHashing] Move the plugin to an external repository #2609
• [Registration] Move the plugin to an external repository #2552

Examples / Scenes

Scripts / Tools

Breaking

Architecture

Modules

• [All] Lifecycle update before v22.06 #3090
• [GL.Rendering3D] Clean up GL components #3115
• [LinearSolver] Update data name in SparseLDLSolver [#2904] #2904
• [Sofa.Core] A helper class for consistent component naming #2631
• [SofaGeneralCollisionMesh] Move TriangleOctree utility class to Helper #2805
• [SofaGeneralObjectInteraction] BoxStiffSpringForceField is now a pack of components #2621
• [SofaGeneralSimpleFEM] Some cleaning in TriangularFEMForceFieldOptim #2567
• [SofaSimpleFEM] Create a TriangleFEMUtils class to factorise Triangle/Triangular[FEMForceField] code #2287
• [SolidMechanics] Remove unused _assembling data #2901
• [Topology.Container.Dynamic] Fix duplicate Data Points in PointSetTopologyContainer #2993

Plugins / Projects

• [runSofa] Add a button and a mechanism to activate the scenegraph updates #3026
• [runSofa] Remove not working feature in QSofaListView. #3025

Examples / Scenes

Scripts / Tools

Improvements

Project

• [Contributing] Update info regarding GitHub Discussions #2741
• [Project] Add the graph illustrating the workflow of a PR review in CONTRIBUTING #3051

Architecture

• [collections] Install collections in their own directory #3196

Modules

• [Constraint.Lagrangian.Correction] Searching for Direct Linear Solver in LinearSolverConstraintCorrection #3055
• [GUI.Qt] Redirect Qt messages to the SOFA output stream #3101
• [GUI.Qt] Save scene graph lock state persistently #3119
• [GUI] Completing text description for mouse interaction with springs #3122
• [HyperElastic] Add draw method to StandardTetrahedralFEMForceField #2838
• [HyperElastic] Introduce example scene for StandardTetrahedralFEMForceField #2857
• [LinearSolver.Direct] LU solver can be templated to CRSMat3x3 #2862
• [LinearSolver.Direct] Unit tests around SparseLDLSolver #3050
• [LinearSolver] Introduce Eigen solvers #2926
• [Regression] Test linear solvers for regression #2776
• [SceneUtility] Move RequiredPlugin to Sofa.SimulationCore #2849
• [Simulation.Core] Special message if extension is Python #2998
• [Sofa.Config][MSVC] Change SIMD cmake option and flags #2652
• [Sofa.GL] Add method drawScaledTetrahedron #2586
• [Sofa.GUI.Common] Change the current GUI by default choice #2979
• [Sofa.LinearAlgebra] Test CRS product compared to Eigen #2839
• [SofaCore] By default, state accessors get the bbox of their states #2780
• [SofaDefaultType] Speedup MapMapSparseMatrix #2641
• [SofaDeformable] Spring lengths can be a list #2602
• [SofaEngine] BoxROI support for 2d and 1d types #2600
• [SofaGeneralEngine] Extend features of NearestPointROI #2595
• [SofaGeometry] Add geometric methods in class Triangle and Edge #2587
• [SofaGuiQt][WindowProfiler] Add root tree + show overhead #2643
• [SofaHelper] Load image using stb #2551
• [SofaHelper] Reduce AdvancedTimer overhead #2645
• [SofaSimpleFem] Improve data description #2740
• [SofaSimpleFem][SofaGeneralSimpleFem][SofaMiscFem] Avoid vectors normalization #2647
• [SofaSimulationCore] More generic DefaultVisualManagerLoop #2549
• [SofaSimulationGraph] Add the ability to control where the object is added in a node. #2396
• [SofaSparseSolver] Apply fill in permutation in SparseLDLSolver #2762
• [SofaSparseSolver] Introduction of an asynchronous LDL solver #2661
• [SofaSparseSolver] Added the choice to compute the decomposition at each step #2756

Plugins / Projects

• [plugins] Add BeamAdapter as a new plugin #2890
• [ArticulatedSystemPlugin] ArticulatedSystemMapping new features #2803
• [ArticulatedSystemPlugin] New example #2804
• [SofaCUDA] Add ConstantForceField, MultiMapping and SubsetMultiMapping #2557
• [SofaCUDA] Add benchmark scenes to check CudaMeshSpringForceField #2556
• [SofaCUDA] Add benchmarks logs in .csv file #2588
• [SofaCUDA] Add support for NearestPointROI #2620
• [SofaCUDA] Add support of CudaVector for qt gui dataWidget #2558
• [SofaMatrix] A new plugin adding tools for linear system matrix #2517
• [SofaMatrix] Eigen can be used to reorder a mesh in order to reduce fill-in #2875
• [SofaMatrix] Export the compliance matrix of a constraint solver #2782
• [SofaMatrix] More details in the readme file #2580
• [SofaMatrix] Setup arithmetic precision for matrix export #2724

Examples / Scenes

• [examples] An example showing a skybox #2678
• [examples] Minor fix in file for topological change process #3121
• [examples] Speed up the falling cubes #2646

Scripts / Tools

• [tools] Update sofa launcher to use SofaPython3 #2968

Bug Fixes

Architecture

• [CMake] FIX out-of-tree build #2940
• [CMake] FIX out-of-tree build (2) #2953
• [CMake] FIX out-of-tree configure #2891
• [CMake] Fix install config files #3031
• [Config][CMake] Fix include directories #3023
• [project] Remove duplicate entry in clang-format #3140

Modules

• [All] Fix compilation when SOFA_FLOATING_POINT_TYPE is set to float #2560
• [All] Move addInput/addOutput from init() to constructor #2825
• [All] Fix missing #include config.h or invalid ordering that disturb the factory's getTarget() to operate properly. #2693
• [Component.IO.Mesh] Fix substring comparison #2837
• [Container.Dynamic] Compute the bounding box of *GeometryAlgorithms #3034
• [Controller] Fix specialization issue in inline file #3182
• [Core] Dynamic control of the computation of the bounding box #3080
• [Core] Fix ObjectFactory::getEntriesFromTarget that returns duplicated names #2544
• [Controller] Fix specialization issue in inline file #3182
• [FEM.elastic] Some optimisation to make FastTetrahedralCorotational even faster #2877
• [GKlib] Portable random number generation #3072
• [GUI.Common] FIX unused variable #3158
• [GUI.Qt] Move default format setup before application creation #3105
• [Helper] Convert path back slashes to slash #2970
• [Helper] Deduce plugin name from path based on known extension #2961
• [Helper] Fix crash when module does not provide a version #2949
• [Helper] Make TagFactory thread safe #2942
• [IO.Mesh] Fix binary loading in case of degenerated triangles #3084
• [Lagrangian.Correction] LinearSolverConstraintCorrection: Trivial optimisations for MSVC #3135
• [Mass] Fix point topological changes for UniformMass #2853
• [MeshGmsh]Fixed false error detection in MeshGmsh.cpp file #3030
• [Preconditioner] Fix missing find_package() in the cmake.in #2841
• [S.C.Engine] Remove previous engine files and fix some cmake.in #2909
• [S.C.LinearSolver]fix bug in linearsolvers and preconditioners #2883
• [S.C.Mapping] Fix assertion in BarycentricMapper #2989
• [S.C.Topology.Container.Dynamic] Fix assert error in QuadSetTopologyContainer #2990
• [SceneUtility] MakeDataAliasComponent: Remove alias in destructor #2832
• [Sofa.Component.Diffusion][Sofa.Component.Mass] Fix diffusion #2798
• [Sofa.Component.Engine] Change the default drawSize from 0.0 to 1.0 for ROIs. #3045
• [Sofa.Component] Fix compilation when FLOATING_POINT is set to float #2907
• [Sofa.Component] Put the initilization code in init() instead of the entrypoint initExternalPlugin() #3112
• [Sofa.Core] Remove annoying 'unused' warning in StateAccessor #2835
• [Sofa.DefaultType] Removes definition of GLdouble in SolidTypes #3060
• [Sofa.Defaulttype] Revert #2641 (changing unordered_map from map in MapMapSparseMatrix) #2699
• [Sofa.GL.Component] Fix tangents/bitangents type set for OpenGL #2855
• [Sofa.GL] Fix cmake config file for out-of-tree when trying to find glew on Windows #3098
• [Sofa.GL] Fix double->GLFloat conversion #2628
• [Sofa.GL] Fix draw function from *SetGeometryAlgorithms #3070
• [Sofa.GUI.Common] Fix module reference in CMake file #2994
• [Sofa.GUI.Qt] Fix GUI registration #3007
• [Sofa.GUI.Qt] Fix toolTip for button reload #3199
• [Sofa.LinearAlgebra] Fix SOFA_OPENMP #2669
• [Sofa.LinearAlgebra] Fix compilation warnings #2627
• [Sofa.Simulation.Graph] Fix broken context management #2964
• [Sofa.Type] Change (?) default constructor for fixed_array #2764
• [Sofa.Type] Mat: Correct tensorProduct #2787
• [Sofa.Type] Fix cmake typo, which was disabling tests #3129
• [Sofa.Visual] Revert PR #2856 #3073
• [SofaBaseCollision] Fixed invalid vector bug in ContactListener #2676
• [SofaBaseLinearSolver] Fix message in MatrixLinearSolver #2781
• [SofaBaseTopology][SofaDeformable][SofaMiscTopology] Proper topological changes in SpringForceField #2653
• [SofaBoundaryCondition] Remove duplicated code #2830
• [SofaCore.Topology] Depreciate method linked to topologyHandler create/destroy function #2869
• [SofaCore] Fix invalid include in MappingHelper #2632
• [SofaCore] Inf fix topo subset indices #2870
• [SofaCore] Make inheritance virtual #2594
• [SofaCore] Restore default component naming for python #2801
• [SofaCore] Restore xml and python different naming conventions #2773
• [SofaCore] Virtual inheritance of BaseObject #2799
• [SofaDeformable] Handle division by zero in MeshSpringForceField #2596
• [SofaDeformable] Springs are able to compute their bounding box #2599
• [SofaEngine] Fix BoxROI undefined behavior #2604
• [SofaFramework] Add tests on aliases for "multiple projects" out-of-tree build #2566
• [SofaGeneralImplicitOdeSolver] Propagate position inside Newton loop #2584
• [SofaGeneralObjectInteraction] Fix dependencies in cmake #2659
• [SofaGuiCommon] Restore argv #2802
• [SofaGuiQt] Fix some dll export macro missing #2555
• [SofaGui] Restore and update CMake variables and modules #3011
• [SofaHelper] Speedup ReadAccessor conversion operator #2583
• [SofaMiscFEM] Fix TriangleFEMForceField and TriangularFEMForceField to have the same behavior #2275
• [SofaMiscFem] FIX missing Strain Displacement matrix update in TriangularFEMForceField #2706
• [SofaMiscForceField] Fix error while trying to compile a plugin depending on SofaGuiQt #2707
• [SofaMiscForceField][SofaBaseMechanics] Add compile-time conditions to avoid compiling unrealistic cases #2514
• [SofaMiscSolver] Accumulate mapped forces in NewmarkImplicitSolver #2578
• [SofaSparseSolver] Add cmake configuration for Threads #2739
• [SofaSparseSolver] Fix compilation error due to namespace change #2543
• [SofaUserInteraction] Fix compat alias defined in the same scope #3032
• [SolidMechanics] TopologySubsetIndices for RestShapeSpringsForceField #3037
• [StateContainer] Fix VecId names for != V_COORD #2872
• [Topology.Container] Fix save/restoreLastState in draw method were missing #3143

Plugins / Projects

• [ArticulatedSystemMapping] Fixed draw method #3095
• [CollisionOBBCapsule] Fix compat for mappers #2903
• [CollisionOBBCapsule] Fix module name #3107
• [CollisionOBBCapsule] Fix return type to support rigid types #3075
• [SofaCUDA] Add matrix3 transpose method on device #2675
• [SofaCUDA] Fail gracefully if no cuda device found #3087
• [SofaCUDA] Fix compilation for SOFA_GPU_CUDA_DOUBLE #2863
• [SofaCUDA] Fix some namespace, headers includes and decl exports #3003
• [SofaCUDA] Fix symbol definition at run time and compilation error #2634
• [SofaCUDA] Ignore CudaTLED-related scene on the CI #2893
• [SofaCUDA] Restore CudaHexahedronFEMForceField #2535
• [SofaCUDA] Rework and move benchmark scenes for HexahedronFEMForceField and TetrahedronFEMForceField #2561
• [SofaCUDA] fix HexahedronFEMForceField double compilation #3081
• [SofaCUDA] update .scene-tests files to fix tests on dashboard #2616
• [SofaCUDA] FIX linking error : needed the code of the destructor #2708
• [SofaCUDA] Forward declaration in wrong namespace #2923
• [SofaMatrix] Move CI setting to the plugin folder #2579
• [SofaNewMat] Fix compilation #2829
• [SofaSphFluid] Fix ParticleSource topologicalChanges use new callbacks mechanism #2868
• [image] fix shadow variable #2606
• [image] remove shadow variable #2910
• [runSofa] Clean up in case GUI init fails #3106
• [runSofa] Fix CMake error if all plugins are disabled #3069
• [runSofa] Fix bug which makes sofa crash when changing a data in a node (issue #2919). #3020
• [runSofa] Fix crash in runSofa when showing object with materials #3018
• [sofaProjectExample] Resuscitate application with gui and simulation (cpp) #2792

Examples / Scenes

• [examples] FIX benchmark_cubes.scn needs CollisionOBBCapsule #2898
• [examples] Fix ProjectToPointconstraint scene by using MeshSpringForceField #2827
• [examples] Fix falling cubes scene #2831
• [examples] Fix plugins in a couple of scenes #2810
• [examples] Move PointSplatModel and SpatialGridPointModel scenes into Sph plugin #2847
• [examples] FIX scenes with old CollisionGroupManager component #3198

Scripts / Tools

• [tools] Correction of the import of the queue library #2572

Cleanings

Project

• [GitHub] Update Changelog and version #2546
• [Git] Clean project files #2884
• [Project] Update README #2905
• [Readme] Delete references to removed/moved directories in licence paragraph #2547
• [doc] Remove old doc materials #2889

Architecture

• [CMake] Clean modules post-NG #2980
• [CMake] Replace references of SofaNG codename to SOFA #3102
• [CMake] Update all deps to SofaFramework modules #2958
• [CMake] Use standard macros + fix out-of-tree builds #3120
• [CMake] Clean packaging for v22.06 #3197

Modules

• [All] Fix minor warnings #3177
• [All] Minor changes to use new SOFA-NG includes #3160
• [All] Remove warnings #3118
• [All] Uniformize includes #3145
• [All] Few fixes to allow compilation with MSVC/Clang-cl #2563
• [All] Minor improvements #2667
• [All] Update Data comments #2719
• [All] Remove few trivial compilation warning & commented code. #3044
• [All] Update the code to remove some deprecation warnings #2529
• [Collision.Geometry] Remove unnecessary *_API in template class definition #3022
• [Collision.Response.Mapper] Missing override keyword #3083
• [Component] All modules have a version #2948
• [Components.Engine.Transform] remove shadow variable in ROIValueMapper #2987
• [Config] Remove unused option SOFA_WITH_DEPRECATED_COMPONENTS #3172
• [Constraint.Lagrangian.Solver] Convert double to SReal #2922
• [Core.Topology] Fix info message when Topology given to topologyHandler is not dynamic #3142
• [Core.Topology] Remove array quadsInHexahedronArray, QuadsOrientationInHexahedronArray should be used #2995
• [Core] Extract BaseLinearSolver class into its own files #2938
• [DefaultType] Prevent division by zero #2929
• [FEM.Elastic] Fix typo on Poisson's ratio #2911
• [FEM.Elastic] Minor changes in TetraXX FEM at init and to be able to access Data #2845
• [FEM.Elastic] Simplify addkToMatrix in TriangularFEMForceFieldOptim #2861
• [FEM.HyperElastic] Remove optimization based on type of matrix in StandardTetrahedralFEMForceField #2858
• [LMConstraint] Remove LMConstraint folder as it is an external plugin #2828
• [LinearSolver.Direct] Minor clean up in SparseCholeskySolver #2881
• [LinearSolver.Direct] Move advice message into parse method #3029
• [LinearSolver.Iterative] Clean floating point types in CG #2808
• [LinearSolver] Remove explicit template instantiation for floating point types different from SReal #2939
• [LinearSolver] SparseLDLSolver: template warning to info message #2969
• [Mapping.Linear] Fix some warnings #2933
• [Mass] fix some warnings #2931
• [Mass] Make warnings become info_msg in masses #3116
• [Metis] Add header files to the project #2581
• [Metis] Disable compilation warnings #2874
• [S.C.LinearSolver] Restore specialized functions in SSORPreconditioner #2885
• [Sofa.Component.Collision] Remove un-needed msg_warning in LocalMinDistance.cpp #2976
• [Sofa.Component.ODESolver] Rewrite tests without SceneCreator #2733
• [Sofa.Core] Use forward declaration for BoundingBox in Base #2728
• [Sofa.DefaultType] Name() should be compile-time evaluable #3174
• [Sofa.GL.Component] OglModel: Uniformize floating point type #2856
• [Sofa.GUI.Component] Add module version #3038
• [Sofa.Geometry][SofaMeshCollision] Deprecate RayTriangleIntersection class #2763
• [Sofa.Helper] Introduce narrow_cast #2590
• [Sofa.Helper] Remove some compilation warnings #2619
• [Sofa.LinearAlgebra] Deprecate unused EigenMatrixManipulator #2793
• [Sofa.Type] Quat: Optimize rotate() (and inverseRotate()) #3138
• [Sofa.Type] Fix some compilation warnings #2589
• [Sofa.Type] Make RGBAColor constexpr #2630
• [Sofa.Type] Simplify template rebinding #2570
• [SofaBaseMechanics] Clean AddMToMatrixFunctor #2755
• [SofaBaseMechanics][SofaMiscForcefield] Auto-detect MassType #2644
• [SofaBaseTopology] Clearer error message #2638
• [SofaBaseVisual] Remove unused background setting in BaseCamera #2637
• [SofaBoundaryCondition] Remove optimization based on type of matrix #2859
• [SofaBoundaryCondition] Replace deprecated headers #2574
• [SofaBoundaryCondition] Sanitize #2559
• [SofaConstraint] Clean timers in GenericConstraintSolver #2769
• [SofaConstraint] Clean timers in LCPConstraintSolver #2640
• [SofaConstraint] Replace raw pointer to Link #2770
• [SofaConstraint] Sanitize #2577
• [SofaCore] Add ObjectFactory_test.cpp #2696
• [SofaCore] Check link to mstate if specified #2553
• [SofaCore] Fix type conversion #2639
• [SofaCore] Name dynamically allocated vec ids #2811
• [SofaCore_test] Minor clean of few unit tests #2573
• [SofaEulerianFluid] Move examples into plugin #2833
• [SofaGeneralEngine] Fix some warnings #2723
• [SofaGuiQt] Error handling when exporting graph #2771
• [SofaGuiQt] Fix english spelling: AdvancedTimer instead of AdvanceTimer #2816
• [SofaGuiQt] Modernize the 'qt::connect' to use the c++ syntax #2943
• [SofaGuiQt] Remove sec unit from GUI #2742
• [SofaGuiQt] Rename attributes to follow SOFA guidelines. #2944
• [SofaKernel] fix shadow variable #2791
• [SofaMiscCollision] Extract OBB/Capsule code into its own plugin #2820
• [SofaMiscFEM] Clean FastTetrahedralCorotationalForceField and add extraData #2569
• [SofaMiscForceField] Fix type conversion in tests #2714
• [SofaRigid][SofaGeneralSimpleFem] Fix typos #2947
• [SofaSimpleFEM_test] Add tests on Tetrahedron, CorotationalTetrahedral and FastTetrahedral FEM ForceField #2842
• [SofaSimpleFem] Prefer usage of accessor in HexahedronFEMForceField #2778
• [SofaSimulation] Remove DAGNodeMultiMappingElement #2694
• [SofaSparseSolver] Disable matrix export in SparseLDLSolver #2725
• [SofaSparseSolver] SparseLUSolver and SparseCholeskySolver support fill reducing permutation #2788
• [SofaTest] Move last tests to Sofa.Component #2996
• [SofaTest] Remove last usages and make it optional #3000
• [SofaUserInteraction] remove shadow variable #2795
• [SolidMechanics.FEM.HyperElastic] Reformat and clean TetrahedronHyperelasticityFEMForceField #3141
• [SolidMechanics] TetrahedronFEMForceField: adds error message for Poisson's ratio #2908
• [StateContainer] Remove deprecated code for topologicalChanges in MechanicalObject. #2867
• [Topology.Dynamic] Remove implicit conversion warnings #2973

Plugins / Projects

• [Plugins] Create ArticulatedSystem plugin (originally from SofaGeneralRigid) #2684
• [Geomagic] Clean scene and code warnings + minor changes #2846
• [Geomagic] Fix CMake and replace includes from legacy header to new architecture #3076
• [SensableEmulation][CMake] Clean Boost dep #3067
• [SofaAssimp] fix shadow variable #2844
• [SofaCUDA] Fix CMake to compile plugin without legacy headers option #3077
• [SofaCUDA][SofaSphFluid] Remove some getTemplateName deprecated methods #3144
• [SofaCUDA] Better readme #2597
• [SofaCUDA] Clean Cuda Collision models #2673
• [SofaCUDA] Clean and factorize CudaTriangularFEMForceFieldOptim #2568
• [SofaCUDA] Convert standard stream to msg_* API #2864
• [SofaCUDA] Modernize CMake for CUDA #2878
• [SofaCUDA] QuadSpringsSphere scenes #2598
• [SofaCUDA] Remove calls to __umul24 on device #2715
• [SofaCUDA] Resurrect CudaTetrahedronTLEDForceField #2865
• [SofaCUDA] harmless cleaning of namespace declaration and header inclusion #2674
• [SofaMatrix] Reduce dependency #2768
• [SofaMatrix][SofaBaseLinearSolver] Move GlobalSystemMatrixExporter #2545
• [SofaPhysicsAPI] Clean CMake file and compile without compat #3091
• [image] remove shadow variables #2936
• [image] Remove qt4 usage #2663
• [image] remove shadow variable #2928
• [image] remove shadow variable #2722
• [image] remove shadow variables #2921

Examples / Scenes

• [examples] Optimal RequiredPlugin #2836
• [examples] Remove misplaced example file #2726
• [examples] Remove missing files from the scene list #2809
• [examples] Remove scene which should be in LMConstraint #2834
• [examples] Run PluginFinder #2950
• [examples] Run PluginFinder after some module changes #2860
• [examples] Remove all uses of DefaultCollisionGroupManager #3104

Scripts / Tools

---

v21.12.00

Full log

SOFA-NG

Modules

• [All] Remove more GeometryAlgorithms usage #2465
• [All] Remove some trivial dependencies on SofaBaseTopology #2449
• [Sofa.Core][SofaBaseTopology] Move TopologyData* from SofaBaseTopology to Sofa.Core #2423
• [Sofa.Core][SofaBaseTopology] Refactor TopologyContainer #2387
• [Sofa.LinearAlgebra] Dispatch *Matrix from BTDLinearSolver, and BlockDiagonalMatrix #2334
• [Sofa.LinearAlgebra] Dispatch EigenMatrix and EigenVector from Eigen2Solver #2339
• [Sofa.LinearAlgebra] Gather tests #2383
• [SofaBaseMechanics] BarycentricMapping: Remove avoidable Sofa.BaseTopology dependencies #2403
• [SofaBaseTopology][SofaMiscForcefield] Remove GeometryAlgorithms from DiagonalMass & MeshMatrixMass #2436
• [SofaFramework] Create Sofa.LinearAlgebra (BaseVector/BaseMatrix & co) #2314

Plugins / Projects

• [Plugins] Move CGALPlugin to an external repository #2500
• [Plugins] Move Flexible/Compliant/RigidScale to external repositories #1873
• [Plugins] Move SofaPython to an external repository #2224
• [Plugins] Remove LMConstraint from SOFA repository #2508

Breaking

Architecture

Modules

• [All] Unused include directive #2475
• [All] Merge TopologySubsetData and TopologySparseData #2114
• [All] Merge branch topologyChanges_PoC introducing topological changes callbacks #2228
• [All] Remove ForceMask #2316
• [All] Update collision response names #2522
• [Sofa.BaseTopology] Remove 1D template for 2D/3D primitives in topology algorithms #2291
• [Sofa.Core] Deprecate officially the usage of SofaOStream (sout, serr, sendl in Base) #2292
• [Sofa.Core] Factorize mstate access #2438
• [Sofa.Core] Use links instead of private std::list #2364
• [Sofa.LinearAlgebra] Fix typo 'bloc' -> 'block' #2404
• [SofaBaseLinearSolver] Clean MatrixLinearSolver #2195
• [SofaBaseTopology] Disable method createTopologyHandler with a TopologyHandler* as parameter #2393
• [SofaBaseTopology] Fix Last element index update in TopologyData #2359
• [SofaCore] Clean RotationMatrix #1995
• [SofaGUI] Replace boost's program_options with cxxopts #2263
• [SofaGuiQt] FIX screenshot mechanism #2507
• [SofaGeneralDeformable] Clean class TriangularBendingSpring and add tests #2363
• [SofaKernel] Split the content of DataTracker.h in different headers files. #2286
• [SofaLoader] Rename MeshObjLoader to MeshOBJLoader #2428
• [SofaMiscFem] Quick clean unused parameters in Triangular and TriangleFEMForceField #2283
• [SofaMiscForceField] Fix MeshMatrixMass duplicate Data parameters #2192
• [SofaSimulationCore] Remove unused class VisitorAsync #1994

Plugins / Projects

• [CImgPlugin/image] Move file and clean headers #2307
• [MultiThreading] Parallel hexa fem #2177

Examples / Scenes

Scripts / Tools

Improvements

Architecture

• [CMake] CLEAN and reenable old macro for git infos #2309
• [GitHub] Create bug-report issue template #2365
• [SofaMacros] Improve sofa_install_git_infos #2373
• [SofaScenes] Introduce option to add scenes as a project of the build #2327

Modules

• [All] Add warnings if components are missing to solve a specific response #2523
• [SofaHelper] Handle recent MSH format in MeshGmshLoader #2155
• [Sofa.Geometry][Sofa.Topology] Add some functions + create unittests #2434
• [Sofa.Helper] PluginManager: Add optional way to check if a plugin is init at the load stage #2425
• [Sofa.LinearAlgebra] Introduce fast sparse matrix product and use it in MechanicalMatrixMapper #2394
• [SofaBaseLinearSolver] Introduce GlobalSystemMatrixExporter #2303
• [SofaBaseTopology] Add method to register callbacks directly using the topologyData #2375
• [SofaBaseTopology] Ensure to add a topology EndingEvent before propagating to all topologyData #2376
• [SofaBaseVisual] Fix VisualModelImpl to use topologyData and callback to handle topological changes #2300
• [SofaCore] Add const version of getMSState to Mass #2293
• [SofaCore] Clearer message when template parameter is not compatible with current context #2262
• [SofaCore] Required data msg now depends on existing default value #2527
• [SofaDefaultType] Introduce test interface for BaseMatrix #2280
• [SofaGeneralAnimationLoop] More optimization on MechanicalMatrixMapper #2411
• [SofaGeneralAnimationLoop] Remove matrix compression #2367
• [SofaGeneralDeformable] Add option to enable/disable spring display in TriangularBendingSprings #2297
• [SofaGeneralSimpleFem] Update BeamFEMForceField topologyHander and add tests #2382
• [SofaGraphComponent] Restore check of deprecated components #2267
• [SofaGuiQt] Introduce expand/collapse buttons #2322
• [SofaGuiQt] Introduce expand/collapse buttons in profiler #2351
• [SofaGuiQt] Multiple selection of timers in the profiler #2141
• [SofaGuiQt] UX: graph is easier to read #2356
• [SofaHelper] Add a method getTrace() to BackTrace class. #2341
• [SofaHelper] Factory key type can be other than std::string #2259
• [SofaMiscFEM_test] Add class to test and compare TriangleFEM and TriangularFEMForceField #2249
• [SofaMiscForceField_test] Add TopologicalChanges unit tests for MeshMatrixMass #2215
• [SofaMiscTopology] Add a component TopologyBoundingTrasher to remove mesh going outside from scene bounding box #2288
• [SofaSimpleFem] Add callback on VonMises in TetrahedronFEMForceField #2407
• [SofaSimpleFem] Hexa FEM optimization when assembling by bloc #2240
• [SofaSimpleFem] Simplify bloc-based optimization #2281
• [SofaSimulationCore] Clearer message when a linear solver is missing #2221
• [SofaSparseSolver] Fix msg readibility in SparseLDL #2294
• [SofaSparseSolver] Introduce FillReducingOrdering #2501

Plugins / Projects

• [image] Restore ability to select a subset of instanciations #2340

Examples / Scenes

• [examples] Add a new example how to create heterogeneous tet FEM #2289
• [examples] Speedup the caduceus #2471
• [Scenes] Update TriangleSurfaceCutting scene to use a bigger mesh with texture #2381

Scripts / Tools

Bug Fixes

Architecture

• [CMake] Clean Sofa.Core CMakeLists + Add missing headers #2444
• [CMake] FIX Threads dependency #2511
• [CMake] FIX libs copy on Windows #2261
• [CMake][modules] FIX out-of-tree builds #2453
• [CMake] Fix return values of Qt5/Qt6 find_packages #2346

Modules

• [All] Fix potential bugs/crashes (from warnings) #2379
• [All] Update IDE directory for targets #2239
• [SofaMiscForceField] Fix massDensity vector update when adding new elements in MeshMatrixMass #2257
• [Sofa.Compat] Fix Matrixexpr alias #2369
• [Sofa.Compat] Fix install #2360
• [Sofa.Core] Fix diamond inheritance in PairInteractionConstraint #2488
• [Sofa.DefaultType] Fix declaration of global variables #2317
• [Sofa.GL] Set glew as mandatory #2358
• [Sofa.Helper] Fix and micro-optimize AdvancedTimer #2349
• [Sofa.Helper] More tests for NameDecoder + fix them #2380
• [Sofa.Helper] PluginManager: check if a plugin is already loaded with a different path #2352
• [Sofa.Helper_test] "fix" wstring unittest #2320
• [Sofa.LinearAlgebra] Fix assert in CompressedRowSparseMatrix #2347
• [Sofa.LinearAlgebra] Fix installation (fwd.h) #2337
• [Sofa.Type, Sofa.Topology] Fix testEdgeBuffer with clang (and add constexpr default constructors) #2357
• [Sofa.Type] FIX createFromRotationVEctor, the inequality was wrong #2332
• [Sofa.Type] Optimize constructor with params for sofa::type::vec #2439
• [SofaBaseLinearSolver] CGLinearSolver must call super init() to check required Data #2419
• [SofaBaseLinearSolver] CRS explicit instantiation #2306
• [SofaBaseLinearSolver] Fix compilation when enabling CRSMultiMatrixAccessor #2456
• [SofaBaseLinearSolver] Fix mulTranspose for scalar types #2331
• [SofaBaseLinearSolver] Link is not overwritten #2497
• [SofaBaseMechanics] Fix UniformMass topology changes handling mode. #2377
• [SofaBaseMechanics] Fix compilation in BarycentricMapping #2443
• [SofaBaseMechanics] Update MechanicalObject resize method to exit if not necessary #1977
• [SofaBaseTopology] Add missing export symbol keyword for TopologySubsetData #2247
• [SofaBaseTopology] Fix TopologySubsetData: call to creation/desctruction callback was missing #2374
• [SofaBaseTopology] use WriteOnlyAccessor in TopologyData #2414
• [SofaBaseVisual] ADD Update callbacks in VisualModelImpl (#1483) #2245
• [SofaBaseVisual] Fix VisualModelImpl updateTextures callback to not call init method #2298
• [SofaBaseVisual] Fix assert #2417
• [SofaBoundaryCondition] Fix ProjectToLineConstraint_RemovingMeshTest.scn #2241
• [SofaBoundaryCondition] Fix constraints in assembled systems #2269
• [SofaConstraint] Fix BilateralInteractionConstraint's draw() #2530
• [SofaConstraint] Fix crash when constraint correction is missing #2222
• [SofaConstraint] fix segfault in GenericConstraintSolver #2265
• [SofaCore] Fix potential memory failure on TopologyData Add method #2459
• [SofaCore] FIX BaseData::getLinkPath() #2354
• [SofaCore] Link: case where Data parent is invalid #2211
• [SofaCore_simutest] Fix getobjects and testcomponentstate unit tests #2326
• [SofaDeformable] Forgot minus sign in #2429 #2448
• [SofaGUICommon] Fix configuration file for install with cxxopts #2279
• [SofaGeneralEngine] Fix a typo in the PairBoxRoi.inl #2324
• [SofaGeneralLoader] Make GridMeshCreator work again #2473
• [SofaGuiQt] Fix graph update on startup #2458
• [SofaGuiQt] Revert #2458 #2479
• [SofaGuiQt] Some fixes for Qt6 #2490
• [SofaGuiQt] Switch name and class name for slaves #2371
• [SofaKernel] Remove ambiguous constructors from type::vector #2270
• [SofaKernel] Remove the getXXXAccessor in accessor.h to keep the one in Data.h #2278
• [SofaMeshCollision, SofaConstraint] Remove LMDNewProximityIntersection #2272
• [SofaMeshCollision] Fix cmake generated config file #2400
• [SofaMeshCollision] Fix compilation without Compatiblity layer #2227
• [SofaMiscCollision] Fix the BarycentricStickContact response #2509
• [SofaMiscForceField] Fix MeshMatrixMass init and topologicalChanges #2193
• [SofaMiscForceField] Fix addForce function in MeshMatrixMass #2305
• [SofaSimpleFem] Check topology in draw #2478
• [SofaSimpleFem] Fix row/col indices in hexa fem for bloc-based matrices #2277
• [SofaSimpleFem] Set valid component state #2499
• [SofaTopologyMapping] Fix Tetra2TriangleTopologicalMapping lost ancestor info #2460
• [SofaUserInteraction] Fix InteractionPerformerFactory symbol export #2495

Plugins / Projects

• [CGALPlugin] FIX sofa::type #2246
• [CGALPlugin] Fix CGAL compilation with CImgData include #2345
• [CImgPlugin] Add Threads dependency in Cmake #2302
• [Geomagic] Fix compilation of code with openHaptics due to sofa::type namespace missing. #2229
• [image] Ignore python2 scenes in CI #2526
• [image] fix shadow variable #2515
• [image] fix shadow variables #2528
• [SofaCUDA] Fix broken visuals in examples #2447
• [SofaCUDA] Fix compilation #2446
• [SofaCUDA] Fix static variable definition for double-precision #2440
• [SofaCUDA] Redundant namespace #2538
• [SofaGuiGlut] FIX compilation for v21.06 #2274
• [SofaGuiGlut] Fix compilation for v21.12 #2539

Examples / Scenes

• [examples] FIX duplicated scene in regression-tests #2251
• [examples] FIX duplicated scene in regression-tests (2) #2252

Scripts / Tools

Cleanings

Architecture

• [CMake] Remove option SOFA_ENABLE_SOFT_DEPS_TO_SOFAPYTHON #2533
• [GitHub] Improve "bug report" issue template #2454

Modules

• [All] Clean warnings #1549
• [All] Remove several TopologyDataHandler and headers inclusion in components #2162
• [All] Remove warnings #2378
• [All] Update codebase to compile w/o Sofa.Compat for v21.12 #2525
• [All] Update lifecycle (macros, etc) for v21.12 #2524
• [All] Clean unreferenced files #2333
• [All] Declaration hides previous local declaration #2463
• [All] Expression is converted to bool and can be replaced #2464
• [All] Minor cleaning #2461
• [All] Minor code cleaning #2225
• [All] Variable can be made constexpr #2472
• [All] fix some warnings and remove unnecessary includes #2312
• [All] Fix minor compilation warnings #2233
• [Sofa.Core] More information when the same Data name is used multiple times #2489
• [Sofa.Core] Remove unnecessary functions because they are in base class #2430
• [Sofa.Helper] Remove duplicated code #2482
• [Sofa.Helper] Remove usage of boost::filesystem #2342
• [Sofa.SimulationCore] Wrong doxygen symbol #2467
• [Sofa.Type] Clean and modernize Vec and Mat #2282
• [Sofa.Type] Move LCPsolver class into a utility function #2187
• [Sofa.Type] Speed up fixed_array constructors with perfect forwarding #2450
• [Sofa2EigenSolver] move SVDLinearSolver to SofaDenseSolver and deprecate the module #2368
• [SofaBaseLinearSolver] Extract and uncomment CRSMultiMatrixAccessor #2220
• [SofaBaseLinearSolver] Fix typo #2256
• [SofaBaseLinearSolver] Make CRSMultiMatrixAccessor optional (compilation and usage) #2372
• [SofaBaseLinearSolver] Remove FullMatrix and FullVector #2313
• [SofaBaseMechanics] Remove TopologyHandler in masses to use TopologyData callbacks (part 5) #2391
• [SofaBaseMechanics] Remove unused handleEvent in UniformMass #2521
• [SofaBaseMechanics] Simplify expression #2468
• [SofaBaseMechanics] Use directly clear() when resetting force in MechanicalObject #2518
• [SofaBaseTopology] 'createTopologyHandler' overrides a member function but is not marked 'override' #2260
• [SofaBaseVisual] Split VisualModelImpl init method in several methods for more clarity #2299
• [SofaConstraint] Better includes #2266
• [SofaConstraint] Divide a timer in 2 #2469
• [SofaConstraint] Remove dependency on TetrahedronFEMForcefield #2250
• [SofaCore] Clean force fields #2243
• [SofaCore] Fix two determiners in a row #2271
• [SofaCore] Remove unused addSubMBKToMatrix in force fields #2244
• [SofaCore] Remove unwanted logs in TopologyHandler. #2401
• [SofaDeformable] clean and optimize addKToMatrix #2429
• [SofaDenseSolver][SofaBaseLinearSolver] CLEAN macros *_CHECK and *_VERBOSE #2310
• [SofaEigen2Solver] Description + timers + support of any BaseMatrix #2336
• [SofaExporter] Rename OBJExporter into VisualModelOBJExporter #2505
• [SofaGeneralAnimationLoop, Sofa.SimulationCore] Extract MechanicalAccumulateJacobian #2481
• [SofaGeneralAnimationLoop] MechanicalMatrixMapper timers #2362
• [SofaGeneralDeformable] Remove TopologyHandler in FEM to use TopologyData callbacks (part 2) #2388
• [SofaGeneralDeformable] Remove TopologyHandler in FEM to use TopologyData callbacks (part 3) #2389
• [SofaGeneralEngine] Cleaning of MeshBoundaryROI #2319
• [SofaGeneralSimpleFem] Add comments and tests for TriangularFEMForceFieldOptim #2284
• [SofaGeneralSimpleFem] Remove TopologyHandler in FEM to use TopologyData callbacks (part 1) #2384
• [SofaGuiGlut] Unreachable break #2405
• [SofaGuiQt] Get rid of magic numbers when centering the window #2466
• [SofaHelper] replace infinite loop Update PipeProcess.cpp #2477
• [SofaHelper] Remove boost::thread dependency #2264
• [SofaHelper_test] Remove temporary file in FileMonitor_test #2537
• [SofaKernel] change data content copy on write condition #2285
• [SofaMiscFEM] Small optimizations on TriangularFEMForceField (speedup ~x1.6) #2273
• [SofaMiscFem] Minor homogeneization in TriangleFEMFF #2408
• [SofaMiscFem] Remove TopologyHandler in FEM to use TopologyData callbacks (part 4) #2390
• [SofaMiscFem] Remove debug code #2420
• [SofaMiscFem] Remove unnecessary copy/pasted code #2421
• [SofaMiscForcefield] Small optimization in addMdx in MeshMatrixMass #2516
• [SofaMiscFem][SofaNonUniformFem] Remove newmat usage #2531
• [SofaPreconditioner] Cleaning #2493
• [SofaSimpleFem] Move duplicated code into a function #2231
• [SofaSimpleFem] Remove branches based on type of matrix #2323
• [SofaSparseSolver] Clean examples scenes of sparse linear solvers #2422
• [SofaTopologyMapping] Fix shadowed variable #2158 #2413
• [Tests] Update SceneCreator_test to inherit from BaseSimulationTest and remove some warnings #2406

Plugins / Projects

• [Plugins] Move Newmat matters into the new SofaNewmat plugin #2532
• [CImgPlugin] Minimize plugin dependencies #2318
• [image] fix shadow variable #2432 #2437
• [image] Remove useless DiffusionSolver dependency #2308
• [image] Clean init members warning #2536
• [SofaCUDA] reorder CMakeLists just for more clarity #2534

Examples / Scenes

• [examples] Add handleDynamicTopology in OglModel with dynamic texcoords #2445
• [examples] Clean linear solver scenes #2494
• [examples] Limit GlobalSystemMatrixExporter.scn to 1 iteration #2328
• [examples] Make scene resolution independent + doc #2361
• [examples] add a warning comment in the scene header #2470
• [scenes] Replace BruteForceDetection by BruteForceNarrowPhase+BVHNarrowPhase #2232

Scripts / Tools

---

v21.06.03

Full log

Bug Fixes

Architecture

• [CMake][modules] FIX out-of-tree builds #2453
• [All] Update IDE directory for targets #2239

Modules

• [SofaGeneralLoader] Make GridMeshCreator work again #2473

---

v21.06.02

Full log

Bug Fixes

Architecture

• [CMake] Clean Sofa.Core CMakeLists + Add missing headers #2444
• [SofaMeshCollision] Fix cmake generated config file #2400

Modules

• [Sofa.Compat] Fix install #2360
• [Sofa.Helper] PluginManager: check if a plugin is already loaded with a different path #2352

---

v21.06.01

Full log

Improvements

Architecture

• [CMake] CLEAN and reenable old macro for git infos #2309
• [SofaMacros] Improve sofa_install_git_infos #2373

Bug Fixes

Architecture

• [CMake] Fix return values of Qt5/Qt6 find_packages #2346

Modules

• [Sofa.Type] FIX createFromRotationVEctor, the inequality was wrong #2332
• [SofaBoundaryCondition] Fix ProjectToLineConstraint_RemovingMeshTest.scn #2241
• [SofaConstraint] fix segfault in GenericConstraintSolver #2265
• [SofaGeneralEngine] Fix a typo in the PairBoxRoi.inl #2324

Plugins / Projects

• [Geomagic] Fix compilation of code with openHaptics due to sofa::type namespace missing. #2229
• [SofaGuiGlut] FIX compilation for v21.06 #2274

Cleanings

Modules

• [All] Minor code cleaning #2225

---

v21.06.00

Full log

SOFA-NG

Architecture

• [CMake] Macro replace dot with underscore for preprocessor defines #1701

Modules

• [Sofa.Type] Remove stdtype subdirectory #1946
• [SofaBaseCollision] Move OBB/Capsule-related intersections/detections/contacts to SofaMiscCollision #2073
• [SofaBaseCollision] Remove dependencies on BaseIntTool #2081
• [SofaCore] Clean dependencies to SimulationCore #1928
• [SofaFramework] Create Sofa.Config module #1674
• [SofaFramework] Create Sofa.Testing module #1834
• [SofaFramework] Isolate OpenGL code into a single module (Sofa.GL) #1649
• [SofaFramework] Rename modules (cmake) #2001
• [SofaGui] Package SofaGui #1719
• [SofaHelper] Clean dependencies to defaulttype #1915
• [SofaHelper] Remove some SofaCore dependencies #1810
• [SofaKernel] Create Sofa.Geometry and Sofa.Topology modules #1912
• [SofaKernel] Create Sofa.Type module #1555
• [SofaKernel] Package all modules of SofaFramework #1990
• [SofaKernel] Port Mat from Defaulttype to Sofa.Type #1775
• [SofaKernel] Port Quat from Defaulttype to Sofa.Type #1790
• [SofaKernel] Port Vec from Defaulttype to Sofa.Type (bis) #1734
• [SofaKernel] Port a bunch of types from Helper and Defaulttype to Sofa.Type #1818
• [SofaKernel] Port vector (and its siblings) from Helper to Sofa.Type #1893
• [SofaKernel] Regroup all compatibility files in a Sofa.Compat module #1944
• [SofaSimulation] Package SofaSimulation #1694
• [SofaUserInteraction] Refactor PickParticlePerformer #2084

Plugins / Projects

• [SofaPython] Move python-related files to SofaPython #1887
• [SofaPython] Regroup dependencies #1875

Breaking

Modules

• [All] Add forward declaration and opaque API for ExecParams, MechanicalParams, VisualParams and ConstraintParams #1794
• [All] Remove SOFA_NO_OPENGL (not the cmake option) #1888
• [All] Removes search & searchAll from BaseObject #1842
• [All] ADD forward declaration headers + remove unneeded includes #1764
• [All] Adds forward declaration and opaque api for the base types (the one used in Node.h) #1765
• [All] Clean MechanicalMatrixVisitor #1992
• [All] Data filename in BaseLoader is now using d_ #2095
• [All] Move BaseMechanicalVisitor in its own files #1989
• [All] Move ConstraintResolution in its own file instead of BaseConstraint.h #1847
• [All] Move ScopedAdvancedTimer in its own files (.h & .cpp) #1853
• [All] Remove un-needed includes. #1730
• [All] Clean lifecycle for v21.06 #2198
• [Sofa.Helper] Remove atomic.h (and fix compilation on Silicon M1) #2160
• [Sofa.Type] Clean Quat #1878
• [SofaBaseCollision] REFACTOR BruteForceDetection #1999
• [SofaBaseLinearSolver] Cleaning in FullMatrix & FullVector & MechanicalState #1792
• [SofaBaseLinearSolver] Document and clean CGLinearSolver #2098
• [SofaBaseMechanics] Restore useRestPos Data initialization for BarycentricMapping #1939
• [SofaBaseTopology] Clean RenumberPoints methods #1840
• [SofaBaseTopology] Remove getter to some Data in Topology container and put them public #1947
• [SofaBaseTopology] Remove public access to propagateTopologyChanges #1860
• [SofaBaseTopology] Rename TopologyEngine and TopologyData classes to match file names #1872
• [SofaBaseTopology] Secure All Topology modifiers API #1859
• [SofaBaseTopology] Secure PointSetTopologyModifier API #1858
• [SofaBaseTopology] Totally remove topologyEngine and move mechanism only in TopologyData and TopologyHandler #1898
• [SofaCore] Base::findLinkDest returns Base* instead of void* #1700
• [SofaCore] FIX SingleLink clear/set behavior #1749
• [SofaCore] Move definition of Link::updateLinks to BaseLink.h #1735
• [SofaCore] Moves MechanicaMatrix out of MultiMatrix.h #1870
• [SofaCore] Remove "depend" from Node #1763
• [SofaCore] isDiagonal is const #1903
• [SofaExplicitOdeSolver] Introduce visitor to know the number of non-diagonal mass matrices #2165
• [SofaGeneralSimpleFem] Remove *Containers #2099
• [SofaHelper] Add two search paths for every prefixes of the plugin manager #1824
• [SofaHelper] Move polygon cube intersection ad-hoc algorithm to SofaBaseTopology #1772
• [SofaHelper] Remove SofaSimulationCore dependency from AdvancedTimer #1770
• [SofaHelper] Replace boost::shared_ptr for std::shared_ptr #1901
• [SofaHelper] remove stream operator<< in accessor #1808
• [SofaMiscCollision] Clean options #2170
• [SofaMiscCollision] Fix multiple bugs in group manager #2076
• [SofaMiscCollision] Move OBB/Capsule (and related Intr* Code) #2168
• [SofaMiscMapping] Factorize code to remove duplicated struct #1957
• [SofaSimulationCore] Move CpuTask class into its own file #1993
• [SofaSimulationCore] Simplify repetitive code in BaseMechanicalVisitor #2125
• [SofaSimulationGraph] Remove dead-end experiment in SimpleApi.h #1845
• [SofaTopologyMapping] adds ellipse feature to Edge2QuadTopologyMapping #1861

Plugins / Projects

• [CGALPlugin] new features #2124

Improvements

Architecture

• [CMake] Speedup configure step #1837
• [CMake] ADD option to fetch pull-request commits in ExternalProject #1961
• [CMake] ADD option to enable/disable compatibility layer #2216

Modules

• [SofaBaseCollision] BVH narrow phase #2043
• [SofaBaseCollision] Introduce brute force broad phase #2010
• [SofaBaseCollision] Speedup direct SAP #1917
• [SofaBaseMechanics_test] Add TopologicalChanges unit tests for DiagonalMass #2176
• [SofaBaseTopology] add intersection methods #2131
• [SofaBoundaryCondition] Add callback in Partial/FixedConstraint #1806
• [SofaBoundaryCondition] Add projectVelocity in FixedConstraint and PartialFixedConstraint #1558
• [SofaBoundaryCondition_test] Add TopologicalChanges unit test for FixedConstraint #2136
• [SofaConstraint] GenericConstraintSolver: compute compliances concurrently #1862
• [SofaConstraint] Parallel free motion and collision detection #2040
• [SofaCore] Add PCH support in CMakeLists.txt #1727
• [SofaExporter] Add option for obj export #1789
• [SofaGeneralAnimationLoop] MechanicalMatrixMapper: adds template #1703
• [SofaGeneralLoader] adds translation and rotation to ReadState #1733
• [SofaGeneralMeshCollision] Direct SAP is written as a narrow phase #2030
• [SofaGuiQt] Add new about window UI and url redirect #1801
• [SofaGuiQt] Qt6 support #1756
• [SofaGuiQt] Tooltips #2139
• [SofaGui] Improve background v20.12 #1758
• [SofaHelper] Optimize use of map_ptr_stable_compare #2105
• [SofaHelper][SofaPython] ADD PluginManager callback and use it in SofaPython #1777
• [SofaImplicitOdeSolver] Rewrite of the static Newton-Raphson ODE solver #2050
• [SofaKernel] Write template list in error message #2207
• [SofaMiscFem] Proposal of FEM force field for Reissner-Mindlin Flat Shell Element #1745
• [SofaMiscTopology] Add component TopologyChecker #1594
• [SofaOpenglVisual] Add transparency when we draw triangles (this allows to see inside the volume). #1742
• [SofaSimulationCore] Add option to call ODE::solve in parallel in SolveVisitor #2135
• [SofaSimulationCore] Launch a new event when textures have been initialized. #1832

Plugins / Projects

• [MultiThreading] Parallel BVH narrow phase #2053
• [MultiThreading] Parallel brute force broad phase #2038
• [Plugins] Add SofaGLFW GUI #2062
• [SofaCUDA] Add more examples for liver scene and squareTissue #2016

Examples / Scenes

• [Benchmark] Introduce benchmark on matrix assembly #2208
• [examples] Improve BeamFEMForceField example #2092
• [scenes] Add scenes to test several components during mesh removal #2161

Bug Fixes

Architecture

• [CMake] FIX Debug build + more cleaning #1891
• [CMake] FIX SofaFramework aliases #2175
• [CMake] FIX header include tree #1863
• [CMake] FIX resources and translations install on Windows #1949
• [CMake] Set CMake install default component #2037
• [CMake][tools] v20.12.00 changes #1804

Extlibs

• [GTest] Fix with GCC11 #2181

Modules

• [All] FIX build without SofaPython soft dependencies #1829
• [All] FIX warnings during STC#11 #2140
• [All] Fix compilation warning. #1699
• [All] Fix invalid Memory access in MechanicalObject and Compliant_test #1849
• [All] Fix debug compilation #2223
• [All] Changes needed for v21.06 #2226
• [Sofa.Type] Add forgotten function declaration, used in Debug #1937
• [Sofa.Type] Add missing header in fixed_array #2006
• [SofaBaseCollision] Fix pipeline warning test #2132
• [SofaBaseCollision] Clean code related to intersection methods #2178
• [SofaBaseMechanics] Clean DiagonalMass init #2186
• [SofaBaseMechanics] Restore tests commented by mistake #2104
• [SofaBaseMechanics] fixes reinit of BarycentricMapping #1815
• [SofaBaseMechanics] Fix bug when deleting point. Mass vector was not well recomputed. #2164
• [SofaBaseMechanics_test] Add more checks in DiagonalMass_test #2183
• [SofaBaseTopology] Add security in TopologyData to check input Topology pointer #2027
• [SofaBaseTopology] Missing override keyword #2035
• [SofaBaseTopology] correct the logic issue in computeEdgeSegmentIntersection #2184
• [SofaConstraint] Fix symbol export of BilateralInteractionConstraint on RigidTypes #2031
• [SofaCore] FIX Issue #1865 #1866
• [SofaCore] FIX buffer overflow when using AddressSanitizer #2121
• [SofaCore] Fix explicit instantiations with MultiMapping #1982
• [SofaCore] Remove duplicated explicit instanciation #1981
• [SofaDefaultType][SofaCUDA] FIX compilation errors #1761
• [SofaDeformable] Fix test in StiffSpringForceField doUpdateInternal #1979
• [SofaFramework] Fix config files for Sofa.GL, for out-of-tree #1911
• [SofaFramework] Put back Sofa.GL in Framework #1920
• [SofaGeneralEngine] fixes ExtrudeQuadsAndGenerateHexas #1673
• [SofaGeneralExplicitOdeSolver] Fix typo in CentralDifferenceSolver description #1894
• [SofaGraphComponent] Clean format of RequiredPlugin message #2111
• [SofaGraphComponent] Fix a typo in the warning emited by the APIVersion component and add missing allowed versions. #2103
• [SofaGraphComponent] Fix message for RequiredPlugin #2093
• [SofaGuiCommon] FIX build with SOFA_NO_OPENGL #1724
• [SofaGuiCommon] Fix computationTimeSampling #1698
• [SofaGuiCommon] Fix include path for compat files when installing #1892
• [SofaGuiCommon] Remove unneeded include in PickHandler #1707
• [SofaGuiCommon] Write json file #2018
• [SofaGuiCommon] fix BackgroundSetting #1826
• [SofaGuiQt] ADD qt.conf.h for custom qt.conf loading at runtime #1820
• [SofaGuiQt] Clean QtGLViewer with key events #1850
• [SofaGuiQt] FIX "show grid" (G) shortcut for QGLViewer #2151
• [SofaGuiQt] FIX segfault due to qFatal in GenGraphForm #1948
• [SofaGuiQt] Fix Expand node #2069
• [SofaGuiQt] Fix Export Graph option #1785
• [SofaGuiQt] Fix RealGUI: QDesktopWidget header missing for Qt < 5.11 #1904
• [SofaGuiQt] Fix compat file SofaGuiQt.h #2044
• [SofaGuiQt] Fix compilation #1889
• [SofaGuiQt] Fix compilation when SOFA_DUMP_VISITOR is enabled #1914
• [SofaGuiQt] Use opaque API instead #1918
• [SofaHelper] FIX "name vs path" issue in PluginManager + FIX PluginManager_test #1823
• [SofaHelper] FIX "name vs path" issue in PluginManager + FIX PluginManager_test (2) #1825
• [SofaHelper] Fix AdvandedTimer test with end() #1781
• [SofaHelper] Fix compilation in kdtree #1942
• [SofaHelper] Fix out of bounds error #1868
• [SofaHelper] Fix the use of Read/WriteAccessorVector that is too permisive (in accessor.h) #1900
• [SofaHelper][SofaBoundaryCondition] Fix export keywords #1984
• [SofaKernel] Fix SimpleApi forward declaration of BaseObject and relocatable of Sofa.GL #1760
• [SofaKernel] Removing double load() in Loaders #2094
• [SofaLoader] Fix MeshObjLoader material parsing by using the proper locale. #2200
• [SofaLoader] FIX Circular dependency in the update of MeshObjLoader #2201
• [SofaMacros] Shorter name for relocatable targets #1769
• [SofaMeshCollision] Fix: windows debug linkage of class EmptyFilter #1839
• [SofaMiscCollision] Contact response order #2134
• [SofaMiscCollision] Fix config.in cmake file for export #2052
• [SofaMiscFEM] Minor changes in TrianglePressureFF and TriangularFEMFF #1779
• [SofaMiscForceField] Clean MeshMatrixMass_test and add more tests #2191
• [SofaMiscTopology_test] Replace inheritence of SofaTest by BaseSimulation_test and fix test #1909
• [SofaOpenGLVisual] Fix unreachable code in VisualManagerSecondaryPass #2068
• [SofaOpenglVisual] Fix typo #2029
• [SofaRigid] fixes applyJT of RigidMapping #1813
• [SofaSimpleFem] Fix TetrahedronFEMForceField Von Mises stress drawing #1854
• [SofaSimpleFem] Fix nasty bug in HexaFEMForceField' s draw() #1766
• [SofaSimpleFem] Fix rendering options in TetrahedronFEMFF #2156
• [SofaSimulation/Tests] Fix init/cleanup in SofaSimulation modules #1987
• [SofaSimulationCore] Set default TaskScheduler worker threads to idle state #1997
• [SofaSimulationCore] Broken URL #2011
• [SofaSimulationCore] FIX Task scheduler memory leak #1927
• [SofaSimulationCore] Reorder according to definition #2034
• [SofaSimulationCore] Revert changes in #1927 #2017
• [SofaSimulationGraph] Restore tests #1988
• [SofaSimulationGraph] Reading links fail when owner is invalid #2166
• [SofaSparseSolver] SparseLDLSolver optimizations #1996
• [SofaTopologyMapping] Fix Edge2Quad condition #2126
• [SofaUserInteraction] Fix Bug of removing topological element when a Hexa2TetraTopologicalMapping is in the scene #1973

Plugins / Projects

• [CGALPlugin] Fix cgal drawings #2206
• [CGALPlugin] Fix compilation errors related to SOFA.GL and types converted to DataTypes #2065
• [CImgPlugin] Fix unit test #2147
• [Geomagic] Fix Geomagic plugin compilation #2033
• [Geomagic] Fix GeomagicVisualModel compilation #1776
• [Geomagic] Fix compilation of GeomagicVisualModel due to change in MechanicalVisitor #2113
• [LMConstraint] Fix collision model #1819
• [LMConstraint] Fix unload #1831
• [PreassembledMass] FIX typo in PreassembledMass.inl #1833
• [SofaCUDA] Fix CudaFixedConstraint when indices are not contiguous #1780
• [SofaCUDA] Ignore example scenes using SofaCUDA on CI #2042
• [SofaCUDA] Quick fix for SofaCUDA NVCC flags include not found during CMake setup #2022
• [SofaCUDA] change the setTopology method signature #1843
• [SofaComponentAll] FIX build with disabled dependencies #1940
• [SofaOpenCL] Fix compilation #1795
• [SofaOpenCL] Remove use of deleted functions #1880
• [SofaPardisoSolver] Fix plugin and add example #1830
• [SofaSphFluid] Fix ParticleSink init and refresh all examples. #2026
• [Tutorials] Resurrect tutorials projects #2024
• [VolumetricRendering] Fix compilation due to removal of params #1869
• [examples] Add missing RequiredPlugin #1895
• [examples] FIX scene name for Regression_test #1881
• [examples] Fix or disable scene tests #1919
• [examples] Fix warnings in Pendulum tutorial #2055
• [examples] Scenes with build_lcp #2110
• [image] Fix wrong condition #2083
• [plugins] Disable old python2 examples #2025
• [runSofa/Modules] Fix various problems with Sofa.GL #1743

Examples / Scenes

• [scenes] Fix (new?) failing scenes on the CI #1798

Cleanings

Architecture

• [CMake] CLEAN old metapackage usage #1883
• [CMake] CLEAN option SOFA_BUILD_WITH_PCH_ENABLED #1755
• [CMake] CLEAN/FIX deprecated things (MSVC mainly) #2217

Modules

• [All] Remove commented code & fix trivial issues #1693
• [All] Remove useless pragma guards in cpp files #1929
• [All] CLEAN tests, use CMake weak dependencies #1886
• [All] Disable Drawtool functions using Vec4f #2197
• [All] Rename SOFA_NO_OPENGL + Relocate Sofa.GL + Improve sofa_add_* macros #1913
• [All] Avoid redundant printLog check #2102
• [All] Depreciate one of the missing use of Aspect in Link and update the code base #1712
• [All] Fix warnings #2196
• [All] Fix warnings #2097
• [All] Refactor Read/Write Accessor. #1807
• [All] Refactor vector & vector_device #1799
• [All] Remove last includes of SofaSimulationTree #1812
• [All] Remove un-needed includes. #1750
• [All] Remove unused includes #1960
• [All] Remove warning: unused variable #1787
• [All] Update code to use sofa::InvalidID instead of topology::InvalidID #2116
• [All] use =deleted for deprecation #1793
• [All] Convert tests to Sofa.Testing #2188
• [All] Remove useless inclusions of MechanicalObject.h #2015
• [All] Remove deprecated calls and warnings #2210
• [All] Remove use of compatibility layer #2179
• [Sofa.Core] Move eq,peq utilities functions to a standalone file #2137
• [Sofa.GL] Relocate the module (again) + clarify module vs plugin definitions #1941
• [Sofa.GL] Remove warnings from deprecated headers #2045
• [Sofa.GL] static variable belongs to the class #1951
• [Sofa.Topology] remove unnecessary pragma #1969
• [Sofa.Type & DefaultType] Adds forward declaration for Vec and StdRigidTypes. #1907
• [Sofa.Type] Modernize fixed_array #1985
• [Sofa.Type] Remove MIN_DETERMINANT preprocessor value #1932
• [Sofa.Type] add operator* for RGBAColor #1952
• [SofaBaseCollision] Broad phase and narrow phase separation #2118
• [SofaBaseCollision] Fix simulation dependency #1768
• [SofaBaseMechanics_test] Update tests to use Sofa.Testing instead of Sofa_Test #2144
• [SofaBaseTopology] Improve TopologyDataHandler message #2152
• [SofaBaseTopology] Remove definition of real #1955
• [SofaBaseTopology] Remove warning when a Data is directly linked to a topoogy Data container #1971
• [SofaBaseTopology] Remove warnings #2046
• [SofaBaseTopology] Single definition of global variables #1950
• [SofaBaseUtils] Clean RequiredPlugin #1899
• [SofaBaseVisual] Move #include<Mat.h> from BaseCamera.h to BaseCamera.cpp #1846
• [SofaBase] Convert tests to Sofa.Testing #2146
• [SofaBoundaryCondition] Avoid ambiguity #1958
• [SofaCommon] Convert tests to Sofa.Testing #2153
• [SofaConstraint] Small cleaning #2174
• [SofaCore] Deprecate operator= #2167
• [SofaCore] Factoring code in Link.h #1704
• [SofaCore] Merge TData in Data. #1753
• [SofaCore] Minor cleaning in constraints #2138
• [SofaCore] Move Link::CheckPath() method to PathResolver::CheckPath() #1717
• [SofaCore] Move definition Link::read() method to BaseLink::read() #1736
• [SofaCore] Move function definition in cpp files #2041
• [SofaCore] Move the streaming operator from .h to .cpp #1751
• [SofaCore] Reduce the needs for include in Node.h #1744
• [SofaCore] Remove empty file #2204
• [SofaCore_simutest] Add tests for Link::CheckPath #1714
• [SofaCore_test] Update the two failling tests so they match the new convention for TypeInfo #1709
• [SofaExplicitOdeSolver] Mark Data as disabled #2218
• [SofaExporter] Remove SofaBaseVisual dependency #2039
• [SofaExporter] Removed duplicated header guard #1954
• [SofaExporter] Update OBJExporter example #1782
• [SofaFramework/Sofa.Testing] remove macro and move testing resources from SofaFramework #2000
• [SofaFramework] Remove warnings (a lot) #1876
• [SofaGeneralEngine] Add option in NearestPointROI to use restPosition or position #1978
• [SofaGeneralEngine] Remove dep on IdentityMapping (because of helper::eq) #2090
• [SofaGeneralMeshCollision] Introduce RayTraceNarrowPhase #2145
• [SofaGuiCommon] Clean includes #2064
• [SofaGuiQt] FIX warning in GraphListenerQListView #2091
• [SofaHelper] Clarify with global namespace #1953
• [SofaHelper] Moves operator>> specialisation for int from set.h to set.cpp #1902
• [SofaHelper] Remove unused UnitTest class + clean FnDispatcher includes #1983
• [SofaImplicitOdeSolver] Fix Latex format for doxygen #2205
• [SofaKernel] Remove last template parameter in Visitor::for_each/for_each_r #1689
• [SofaKernel] Remove some dependencies from SofaHelper to SofaCore #1686
• [SofaKernel] Removes the method BaseData::getOwnerClass() #1890
• [SofaKernel][SofaGui] Move Boost::program_option and remove Boost::system dependencies #1848
• [SofaMiscCollision] Move back to modules (instead of applications/plugins) #2127
• [SofaMiscMapping] Remove unused global variable #1956
• [SofaNonUniformFem] Remove shadow variable #1874
• [SofaSimpleFem] FIX wrong initialization order #1938
• [SofaSimulation*] Fix confusion between namespaces #1959
• [SofaSimulationCore] Clean free motion animation loop #1930
• [SofaSimulationCore] Move WorkerThread class into its own file #2002
• [SofaSimulationCore] Moves code from TopologyChangeVisitor.h into .cpp #1905
• [SofaSimulationCore] Remove ClassSystem.h #1844
• [SofaSimulationCore] Add tons of details in Euler solver #2163
• [SofaSimulationCore] Clean AnimateVisitor #2194
• [SofaSimulation] Convert tests to Sofa.Testing #2154
• [SofaSparseSolver] Clean useless dependencies #2012
• [SofaUserInteraction] Minor cleaning of RayTraceDetection #2009
• [SofaUserInteraction] Remove AddFramePerformer as it is not compiled #1970
• [SofaUserInteraction] Deprecate RayTraceDetection #2212
• [Tests] Move tests in their (new) correct locations #1998
• [Tests] Replace sofa::helper::testing by sofa::testing #2143

Plugins / Projects

• [CGAL] Remove #pragma once in .cpp files #2202
• [Geomagic] Add macro HAS_OPENHAPTICS to know if library is present #2115
• [Geomagic] Duplicated includes #2070 #2072
• [HeadlessRecorder] CLEAN Headless recorder #2058
• [LMConstraint] Move LMConstraint components in a new plugin #1659
• [LMConstraint] Move examples in LMConstraint plugin #1778
• [MultiThreading] Removes useless classid in AnimationLoopParalleleScheduler.cpp #1906
• [SofaCUDA] Renaming cudaMatrix methods to use rowSize and colSize #1788
• [SofaDistanceGrid] Regroup miniFlowVR-related things #1616
• [SofaPython] CLEAN PythonEnvironment info messages #1835
• [THMPGSpatialHashing] Add a readme file and basic information #2007
• [projects] remove unused variable #1747

Examples / Scenes

• [examples] Clean warning scene examples #1802
• [scenes] Update tetrahedron and tetrahedralCorotational FEM scenes #2172

Scripts / Tools

• [tools] CLEAN logs for macos-postinstall-fixup #2120

---

v20.12.03

Full log

Bug Fixes

Architecture

• [CMake] Set CMake install default component #2037

Modules

• [SofaBoundaryCondition] Fix export keywords #1984
• [SofaGuiQt] Fix Expand node #2069
• [SofaHelper] Fix export keywords #1984
• [SofaMiscCollision] Fix config.in cmake file for export #2052
• [SofaSimulationCore] Broken URL #2011

Plugins / Projects

• [Geomagic] Fix Geomagic plugin compilation #2033

---

v20.12.02

Full log

Bug Fixes

Architecture

• [CMake] FIX resources and translations install on Windows #1949

Modules

• [SofaGeneralExplicitOdeSolver] Fix typo in CentralDifferenceSolver description #1894
• [SofaGuiQt] Fix RealGUI: QDesktopWidget header missing for Qt < 5.11 #1904
• [SofaGuiQt] FIX segfault due to qFatal in GenGraphForm #1948
• [SofaHelper] Fix out of bounds error #1868

Plugins / Projects

• [SofaCUDA] change the setTopology method signature #1843

Examples / Scenes

• [examples] Add missing RequiredPlugin #1895

---

v20.12.01

Full log

Improvements

Modules

• [SofaGui] Improve background v20.12 #1758
• [SofaHelper] ADD PluginManager callback and use it in SofaPython #1777

Plugins / Projects

• [SofaPython] ADD PluginManager callback and use it in SofaPython #1777

Bug Fixes

Architecture

• [SofaMacros] Shorter name for relocatable targets #1769

Modules

• [All] FIX build without SofaPython soft dependencies #1829
• [All] Fix invalid Memory access in MechanicalObject and Compliant_test #1849
• [All] Almost green dashboard #1669
• [SofaCore_test] Update the two failling tests so they match the new convention for TypeInfo #1709
• [SofaDefaultType] FIX compilation errors #1761
• [SofaBaseMechanics] fixes reinit of BarycentricMapping #1815
• [SofaGuiCommon] Fix computationTimeSampling #1698
• [SofaGuiCommon] fix BackgroundSetting #1826
• [SofaGuiQt] ADD qt.conf.h for custom qt.conf loading at runtime #1820
• [SofaGuiQt] Fix Export Graph option #1785
• [SofaGuiQt] Clean QtGLViewer with key events #1850
• [SofaHelper] FIX "name vs path" issue in PluginManager + FIX PluginManager_test #1823
• [SofaMiscFEM] Minor changes in TrianglePressureFF and TriangularFEMFF #1779
• [SofaSimpleFem] Fix nasty bug in HexaFEMForceField' s draw() #1766

Plugins / Projects

• [Geomagic] Fix GeomagicVisualModel compilation #1776
• [PreassembledMass] FIX typo in PreassembledMass.inl #1833
• [SofaCUDA] FIX compilation errors #1761
• [SofaCUDA] Fix CudaFixedConstraint when indices are not contiguous #1780
• [SofaOpenCL] Fix compilation #1795
• [SofaPardisoSolver] Fix plugin and add example #1830
• [SofaRigid] fixes applyJT of RigidMapping #1813
• [SofaSphFluid] Remove std::execution usage #1684

Examples / Scenes

• [Scenes] Fix (new?) failing scenes on the CI #1798

Cleanings

Plugins / Projects

• [SofaPython] CLEAN PythonEnvironment info messages #1835
• [SofaCUDA] Renaming cudaMatrix methods to use rowSize and colSize #1788

---

v20.12.00

Full log

SOFA-NG

Follow the SOFA-NG project on its board and its main issue.

• [SofaMisc] Pluginize all modules #1306
• [SofaGeneral] Pluginize all modules #1529
• [SofaCommon] Pluginize all modules #1597
• [SofaBase] Package all modules #1633
• [modules] Set relocatable flags to pluginized modules #1604
• [SofaCommon] Make SofaCommon a deprecated collection #1609
• [SofaGeneral] Make SofaGeneral a deprecated collection #1596
• [SofaGeneral] Move BVH-format feature from Helper to SofaGeneralRigid #1644

Breaking

Architecture

• [SofaMacros] Refactor for better target and package management #1433

Modules

• [All] Change index_type from size_t to uint #1514
• [All] Deprecate m_componentstate and rename to d_componentState #1358
• [All] Factorize and rename TopologyObjectType into TopologyElementType #1593
• [All] Remove topologyAlgorithms classes #1546
• [All] Standardize index type for Vector/Matrix templates #1453
• [All] Uniform size type #1515
• [SofaKernel] Refactor BaseData to use DataLink #1491
• [SofaKernel] ♻️ FIX & CLEANUP BoxROI #1482
• [SofaKernel][SofaCore][SofaLoader][SofaGeneralLoader] SOFA with callbacks #1408

Plugins / Projects

• [ColladaSceneLoader][SofaAssimp] Move ColladaSceneLoader plugin content into SofaAssimp plugin #1360
• [plugins] Remove plugins to be deleted #1439

Improvements

Architecture

• [All] Accelerating CMake generation #1464
• [SofaMacros] Handle COMPONENTS (needed by SofaPython3) #1671

Modules

• [All] Replace last use of Qwt by QtCharts and remove internal library #1512
• [SofaBaseCollision] Add option to use of normal orientation in triangle and self-colliding cube #1559
• [SofaCore] Add virtual getPathName function in Base #1455
• [SofaGeneralLoader] Add option for transform in SphereLoader to match other loaders API #1495
• [SofaGeneralLoader] allow ReadState at init #1654
• [SofaHaptics] Add multithread test on LCPForceFeedback component #1581
• [SofaHaptics] Add simple tests on LCPForceFeedback component #1576
• [SofaImplicitField] Add new ImplicitFields and getHessian to ScalarField #1510
• [SofaKernel] ADD: add polynomial springs force fields #1342
• [SofaKernel] Add DataLink object & PathResolver. #1485
• [SofaKernel] Add setLinkedBase method in BaseLink #1436
• [SofaKernel] Add whole program optimization (aka link-time optimization) for msvc #1468
• [SofaKernel] Exposing Data in ContactListener. #1678
• [SofaKernel] Filerepository gettemppath #1383
• [SofaKernel] Set read-only all data defined by the file loaded #1660
• [SofaQtGui] Restore GraphWidget for Momentum and Energy using QtCharts instead of Qwt #1508

Plugins / Projects

• [Compliant] Add WinchMultiMapping and ContactMultiMapping #1557

Bug Fixes

Architecture

• [CMake] FIX non-existent target with sofa_add_plugin #1584
• [CMake] Fix Cmake configure step with SOFA_WITH_DEPRECATED_COMPONENTS #1452

Extlibs

• [extlibs/gtest] Fix the broken sofa_create_package_with_targets in gtest #1457

Modules

• [All] issofa_bugfix: cleans and fixes #218
• [SofaBaseLinearSolver] Fix logging info with SPARSEMATRIX_VERBOSE #1715
• [SofaBaseMechanics] Use d_showColor for indices instead of arbitrary white #1511
• [SofaBaseMechanics] 🐛 FIX draw function in UniformMass #1480
• [SofaCarving] Fix method doCarve should be called at AnimateEndEvent #1532
• [SofaCore] FIX const correctness in DataTracker #1488
• [SofaCore] FIX simu unload crash caused by missing checks on slaves ptrs #1445
• [SofaFramework] Fix deprecated_as_error macro for MSVC #1658
• [SofaGUI] Fix Cmake files for out-of-tree compilation #1570
• [SofaGeneralAnimationLoop] Fix mechanical matrix mapper #1587
• [SofaGeneralEngine] Fix BarycentricMapperEngine parse() function #1516
• [SofaGeneralLoader] fix GIDMeshLoader and add example #1554
• [SofaHelper/image] Fix unit tests #1585
• [SofaHelper] Add SOFA/bin to SOFA_PLUGIN_PATH #1718
• [SofaHelper] Link necessary Boost macro with SofaHelper (for Windows) #1578
• [SofaKernel][SofaGuiQt] Qt viewer with intel drivers #1690
• [SofaKernel] Add updateOnTransformChange update callback on MeshLoader. #1459
• [SofaKernel] Data file repository now looks into the SOFA install directory #1656
• [SofaKernel] Improve check for already registered plugins #1472
• [SofaKernel] In DataFileName, the name FILE used in the PathType enum could be ambigous #1465
• [SofaKernel] 🐛 Break link when passing a nullptr to setLinkedBase #1479
• [SofaKernel][SofaGeneralRigid] Minor fixes in ArticulatedSystemMapping and JointSpringForceField #1448
• [SofaKernel] Implement an update mechanism on component: RequiredPlugin #1458
• [SofaKernel] Switch to include_guard() instead of include_guard(GLOBAL) #1467
• [SofaMacros] FIX RELOCATABLE_INSTALL_DIR target property #1631
• [SofaMacros] FIX deprecated macro sofa_generate_package #1446
• [SofaMacros] FIX libs copy and plugin deps finding #1708
• [SofaMacros] FIX missing lib copy on Windows #1711
• [SofaMacros] FIX plugins RPATH #1619
• [SofaMacros] Improve RPATH coverage on MacOS #1713
• [SofaMacros] Recursive deps search for RPATH #1710
• [SofaOpenglVisual] OglViewport: a fix for compatibility with modern OpenGL #1500
• [SofaSimulationGraph] No reason to have moveChild in private #1470

Plugins / Projects

• [CGALPlugin] Fix compilation for CGal version > 5 #1522
• [CImgPlugin] CLEAN dependencies in CMakeLists #1651
• [Flexible] FIX deps to pluginized modules #1590
• [Geomagic] Fix scenes ForceFeedBack behavior due to a change in UncoupledConstraintCorrection #1435
• [OmniDriverEmul] Fix thread behavior and replace boost/pthread by std::thread #1665
• [SofaOpenCL] Fix Cmake configuration #1647
• [SofaPython] Small fixes to import plugin and remove scene warnings #1466
• [runSofa] CLEAN unused dep to SofaGeneralLoader #1648
• [SofaSPHFluid] Fix compilation with std::execution #1542

Examples / Scenes

• [examples] Fix HexahedronForceFieldTopologyChangeHandling scene #1573

Scripts / Tools

• [scripts] Update licenseUpdater #1498

Cleanings

Architecture

• [SofaMacros] Split SofaMacros.cmake into multiple files #1477
• [SofaMacros] Use IN_LIST (CMake >= 3.3) #1484

Modules

• [All] Bunch of removal of sout/serr in the whole code base #1513
• [All] Fix compilation with flag NO_OPENGL #1478
• [All] Fix many warnings #1682
• [All] Remove SMP-related Code #1613
• [All] Replace all sofa::defaulttypes::RGBAColor to sofa::helper::types::RGBAColor #1463
• [Doc] Remove Inria Foundation mention from CONTRIBUTING #1451
• [SofaBaseTopology] Fix ambiguity causing compilation error with MSVC #1577
• [SofaBaseTopology] Rework method getIntersectionPointWithPlane #1545
• [SofaBaseVisual][SofaDeformable] Clean some codes #1449
• [SofaDeformable] Update RestShapeSpringsForceField #1431
• [SofaGeneralEngine] Improve mesh barycentric mapper engine #1487
• [SofaGeneralEngine] Remove useless create() function in some components #1622
• [SofaGuiQt] Move libQGLViewer lib into its module #1617
• [SofaHaptics] Small fix on LCPForceFeedback haptic rendering #1537
• [SofaHelper] DrawTool uses RGBAColor now (instead of Vec4f) #1626
• [SofaHelper] Remove OpenGL dependency in vector_device #1646
• [SofaKernel] Clean namespace BarycentricMapper #1571
• [SofaKernel] Factorize some code for maintenance #1569
• [SofaKernel] Refactor the FileRepository constructors #1610
• [SofaKernel] Remove core::Plugin/core::PluginManager #1612
• [SofaKernel] Remove parentBaseData in BaseData.h #1490
• [SofaKernel] Remove support for BaseData in Link.h #1503
• [SofaKernel] Remove un-needed StringUtil.h in Base.h #1519
• [SofaKernel] Remove un-needed class reflection system. #1541
• [SofaLoader] Use references in Meshloader #1627
• [modules] Minor fixes #1441

Plugins / Projects

• [plugins] Reactivate SofaPython3 #1574
• [Geomagic] Update demo scenes to use direct solvers. #1533
• [InvertibleFVM] Externalize the plugin #1443

---

v20.06

Full log

Breaking

Architecture

• [All] CMake and includes massive clean #1397
• [CMake] Remove the use of an internal Eigen3 version and instead use the one installed on the system. #1281
• [CMake] Remove Collections #1314
• [Modularization] SofaNonUniformFem + SofaAdvanced removal #1344
• [Modularization] SofaValidation #1302

Modules

• [All] BaseClass reflection refactoring #1283
• [All] Remove Aspects from Sofa #1269
• [All] Remove compilation warnings related to collision models #1301
• [All] Update code base according to refactoring done in PR1283. #1330
• [All] Remove all deprecation warnings after v1912 #1241
• [All] v19.12 changes + DocBrowser by Defrost #1275
• [SofaBaseMechanics] Change data name: handleTopologicalChanges in UniformM #1291
• [SofaCore/Visual] Add new functions in drawTool (BREAKING) #1252
• [SofaGeneralEngine] Refresh MeshBarycentricMapperEngine #1404
• [SofaCore] ADD directory DataFileNames #1407
• [SofaKernel] Refactor DDGNode #1372
• [SofaKernel] Totally remove the macro CHECK_TOPOLOGY from BaseMeshTopology #1399
• [SofaKernel] Update EulerExplicitSolver #1260
• [SofaKernel] implement activer's code at CollisionModel. #1259

Plugins

• [SofaCUDA] Arch auto-detection for nvcc #1336

Improvements

Architecture

• [CMake] Create an IDE folder for all relocatable_install targets #1405

Modules

• [SofaBaseVisual] Add camera gizmo in base camera #1253
• [SofaCore] Remove warning in ExecParam #1325
• [SofaCore] ADD: DataCallback system in Base #1406
• [SofaDefaultType] Add a Ray type. #1251
• [SofaHelper] Add the obj id to labels when available #1256
• [SofaHelper] Add auto-friendly getWriteAccessors/getReadAcessor... #1254
• [SofaKernel] Set the default compilation mode to c++17. #1249
• [SofaKernel] Add DataTypeInfo for BoundingBox #1373
• [SofaKernel] Cleaner output when the creation of an object fails #1266
• [SofaSimulationCore] Add a way to fill a multi vector from a base vector with a MechanicalOperations (mops). #1248

Plugins / Projects

• [plugins] Fix warnings for option compilation #1316
• [sofa-launcher] Change doc on sofa-launcher to markdown #1311
• [SofaCUDA] Compilation without OpenGL #1242

Examples / Scenes

• [examples] Add a scene illustrating ShewchukPCG #1420

Bug Fixes

Architecture

• [CMake] Add SofaNonUniformFem to the dependencies of SofaMisc #1384
• [SofaFramework/CMake] Create configuration type dir before copying lib #1347
• [extlibs/gtest] Add character test in gtest paramName to allow dash character #1265

Modules

• [All] Clean warnings for option config, again #1339
• [All] Fix SOFA_LIBSUFFIX used in Debug by PluginManager #1313
• [All] Overridden 'canCreate' methods should always log an error message when they fail #1294
• [SofaBaseTopology] Fix GridTopology edge computation #1323
• [SofaBaseTopology][SofaExporter] Fix failing tests due to changes in topology #1335
• [SofaConstraint] Fix test further to #1369 #1386
• [SofaEigen2Solver] Fix CMake test on the version of Eigen #1416
• [SofaEngine] Fix engine unit tests #1280
• [SofaEngine] Fix Engine_test #1338
• [SofaFramework] Windows/VS: Remove warnings flags from definitions #1368
• [SofaGuiQt] Fix compilation for SOFA_DUMP_VISITOR_INFO #1415
• [SofaGuiQt] Fix node graph #1424
• [SofaHeadlessRecorder] Update headless recorder to use the new ffmpeg recorder #1396
• [SofaHelper] AdvancedTimer wasn't using the good timer ids for the label assignments #1244
• [SofaHelper] Fix unloading with PluginManager #1274
• [SofaHelper] Fix fixed_array compilation with VS2019 #1426
• [SofaKernel] Fix hexahedra detection in BoxROI #1417
• [SofaKernel] Fix minor bug in BoxROI and add warning message in RestShapeSpringsForceField #1391
• [SofaKernel] Fixes a bug where the camera was not moving with the Qt viewer #1377
• [SofaKernel] Improve error message when a component cannot be created. #1332
• [SofaKernel] Remove the installation of external system libraries #1387
• [SofaKernel] Set default visibility to SOFA_EXPORT_DYNAMIC_LIBRARY #1410
• [SofaMiscTopology] Fix bug in TopologicalChangeProcessor #1247
• [SofaSimpleFem] Small Fix #1403
• [SofaSimulationCore] FIX resizing of bboxes in UpdateBoundingBoxVisitor #1268
• [SofaTopologyMapping] Fix Tetra2TriangleTopologicalMapping #1319

Plugins / Projects

• [Geomagic] Fix several wrong behaviors in driver code #1378
• [MeshSTEPLoader] FIX OCC version check #1312
• [MeshSTEPLoader] FIX build with OCC >= 7.4 #1310
• [Modeler] FIX link error on Windows #1282
• [SofaMiscCollision] Fix topological changes in TetrahedronCollisionModel #1354
• [SofaSphFluid] Fix broken behavior for ParticleSink and ParticleSource #1278
• [SofaSphFluid] FIX .scene-tests #1317
• [SofaOpenCL] Make it work with 20.06 #1361
• [SofaPython] Restrict the plugin and its dependers to C++11 #1284

Examples / Scenes

• [examples] Fix SurfacePressureForceField example #1273
• [examples] Fix caduceus #1392
• [examples] Update the scene StandardTetrahedralFEMForceField.scn #1064

Cleanings

Architecture

Modules

• [All] Clean namespace for some classes #1422
• [All] Fix warnings due to visibility attribute #1421
• [All] Clean due to doc #1398
• [All] Clean warnings #1376
• [All] Fix minor warnings #1388
• [All] Fix warnings generated due to change in Aspects #1329
• [All] Minor changes in comment or format #1411
• [All] Multiple fixes scenes #1289
• [All] Remove all DISPLAY_TIME define #1267
• [All] Remove some compilation warning. #1343
• [All] Replace usage of sleep functions for the std one #1394
• [All] Uniform use of M_PI #1264
• [All] Update header for cleaner future management #1375
• [All] replace all serr by msg_error/msg_warning #1236
• [SofaConstraint] Set the use of integration factor true by default #1369
• [SofaDefaultType] BoundingBox : Remove annoying warnings #1425
• [SofaGeneralEngine] Fix draw of the sphere in SphereROI #1318
• [SofaGeneralEngine] Remove remaining BoxROI after SofaEngine move #1333
• [SofaGeneralLoader] Allow flip normals in Gmsh and STL loaders #1418
• [SofaGui] Pass QDocBrowser as an option #1315
• [SofaKernel] Add Data bool d_checkTopology in Topology container to replace the use of CHECK_TOPOLOGY macro #1351
• [SofaKernel] Clean occurrences of CHECK_TOPOLOGY macro in code #1352
• [SofaKernel] Clean of Material.h/cpp #1346
• [SofaKernel] Remove X11 dependency when SOFA_NO_OPENGL is enabled. #1370
• [SofaKernel] Who hates warnings? #1258
• [SofaKernel] replace all serr by msg_error/msg_warning #1237
• [SofaSparseSolver] Move CSparse and metis into SofaSparseSolver #1357

Plugins / Projects

• [CGALPlugin] Clean and pluginization #1308
• [Geomagic] Move all code related to device model display in a dedicated class. #1366
• [Geomagic] Fix compilation #1393
• [ManifoldTopologies] Remove CHECK_TOPOLOGY macro occurrences #1353
• [ManifoldTopologies] Update the license in init.cpp #1414
• [OpenCTMPlugin] Fix compilation and clean before moving out #1359
• [PluginExample] Update PluginExample #1356
• [Regression] Update hash #1321
• [SofaSphFluid] Clean SofaFluid plugin compilation warning. #1296

Examples / Scenes

• [examples] Fix and remove 3 scenes with deprecated component #1355
• [examples] Remove useless files and add MeshMatrixMass example #1257
• [scenes] Fix scenes from alias #1292
• [scenes] Remove scene warnings due to Rigid template #1295
• [scenes] Fix alias warnings in scenes #1279

---

v19.12

Full log

Breaking

Architecture

• [All] Improve extlibs integration #1137
• [packages] Move all SofaComponent* + rename SofaAllCommonComponents #1155

Modules

• [All] Add SingleLink to Topology to reveal all hidden GetMeshTopology #1183
• [All] Remove ExtVecType #1055
• [All] up change on GetMeshTopology #1223
• [SofaBoundaryConditions] Apply doInternalUpdate API to ConstantForceField #1145
• [SofaKernel] Replacing const char* with strings for group / help / widget etc. #1152
• [SofaKernel] ADD: static method in events to retrieve the classname #1118
• [SofaKernel] Set BaseData to non-persistant by default #1191
• [SofaKernel] fix root's getPathName #1146

Improvements

Architecture

• [CMake] v19.06 changes #1114
• [extlibs] Set Eigen as external project + upgrade to 3.2.10 #1101
• [extlibs] Upgrade Qwt extlib from 6.1.2 to 6.1.4 #1136

Modules

• [All] Add SingleLink to Topology to reveal hidden GetMeshTopology Part 2 #1199
• [All] Add update internal mechanism #1131
• [All] Update the SOFA Guidelines #1135
• [SofaBaseMechanics] Add topological change in barycentric mapping #1203
• [SofaBaseMechanics] Use doUpdateInternal API in DiagonalMass #1150
• [SofaBaseMechanics] Use doUpdateInternal API in UniformMass #1149
• [SofaBaseTopology] Add new geometric methods in TetrahedronSetGeometryAlgorythms #1160
• [SofaCore] Remove thread specific declaration #1129
• [SofaGeneralEngine] Added Rigid to Euler orientation export #1141
• [SofaHaptics] Add mutex and option to lock the ForceFeedback computation #1157
• [SofaKernel] ADD: DataTypeInfo<vector> & improved doc #1113
• [SofaKernel] Add a strict option to the BoxROI to prevent partially inside element to be in the box. #1127
• [SofaKernel] Add fixed_array_algorithm + RGBAColor::lighten #1172
• [SofaKernel] Add new events to detect Initialization & Simulation start. #1173
• [SofaKernel] Add option in StiffSpringFF to track list of input springs #1093
• [SofaKernel] Change several AdvancedTimer logs for a better tracking #1094
• [SofaKernel] Consistent SofaFramework modules #1200
• [SofaKernel] Make componentState a real data field #1168
• [SofaMiscForceField] Use doUpdateInternal API in MeshMatrixMass #1151
• [SofaQtQuick] Pass extra command-line arguments for python scenes in a more high-level function call #992
• [SofaSphFluid] Add sprite-based point render #1194
• [SofaSphFluid] Update rendering & other #1215

Plugins / Projects

• [runSofa] Fix DataWidget display Speicherleck and long loading #1181

Examples / Scenes

• [Examples] Add some mesh and PR1000 demo scene #1112

Bug Fixes

Architecture

• [CMake][SofaFramework] Remove FFMPEG_exec target from the dependencies of SofaFramework #1177
• [CMake] FIX Eigen finding #1175
• [CMake] FIX unknown compiler option on VS2015 #1192
• [SofaMacros] FIX default module version #1123
• [SofaMacros] FIX sofa_set_install_relocatable escaped chars #1154

Modules

• [All] Fix warnings #1206
• [All] Fix warnings #1167
• [All] Fix some warnings and OglAttribute handleTopologyChange #1159
• [SofaBoundaryCondition] Fix FixedRotationConstraint when using more than one locked axis #1119
• [SofaBaseMechanics] Make Uniform and DiagonalMass compatible with topo change #1212
• [SofaBaseTopology] Fix SparseGrid obj loading + tests #1231
• [SofaComponentAll] FIX SofaAllCommonComponents backward compatibility #1204
• [SofaConstraint] Fix UncoupledConstraintCorrection topology change handling #1115
• [SofaConstraint] Fix crash with PrecomputedConstraintCorrection #1230
• [SofaCore] FIX decode functions in BaseClass #1222
• [SofaDefaulttype] FIX too many ExtVec warnings with GCC #1140
• [SofaExporter] Move bindings from SofaPython #1095
• [SofaFramework] Add other orders for fromEuler() for Quaternions. #1221
• [SofaFramework] Install the SofaSimulationCore target back into the SofaFramework package #1182
• [SofaGuiQt] Fix unexpected symbol in CMakeLists #1132
• [SofaGui] FIX missing find_package in SofaGuiConfig.cmake.in #1198
• [SofaGui] Fix VideoRecorder #1138
• [SofaGui] Prevent the GuiManager to store a pointer for the valid gui name #1108
• [SofaHeadlessRecorder] FIX headlessRecorder_test #1174
• [SofaHelper] FIX Eigen install path #1240
• [SofaKernel] Add bloc access in basematrix #1143
• [SofaKernel] Changes for Visual Studio and c++17 #1162
• [SofaKernel] FIX regex in SofaMacros.cmake #1161
• [SofaKernel] Fix alloc size #1142
• [SofaKernel] Fix some AdvanceTimer log missing #1158
• [SofaKernel] Fix useless warnings #1144
• [SofaKernel] Several fix in draw methods and topology warnings #1111
• [SofaKernel] Small Fix in CollisionModel #1202
• [SofaKernel] Use links for input and output topologies of the barycentric mapping #1125
• [SofaMisc] Fix compilation with SOFA_NO_OPENGL #1193
• [SofaSimulationGraph] Fix CollisionGroupManager wrong search of deformable object node #1060
• [SofaSimulationGraph] Stop DAGNode get parent topology process in BarycentricMapping #1176
• [SofaSphFluid] Clean, Fix, Update ParticleSink #1195

Plugins / Projects

• [All] Fix minor compilation issue in plugins #1106
• [Carving plugin] Small fix at init. #1110
• [Cgal plugin] Fix windows cmake dll path and add a scene example #958
• [Regression_test] Update regression test references for CollisionGroup #1102

Cleanings

Architecture

• [CMake] Use cmake_dependent_option for plugin tests #1164

Modules

• [All] Fix order warnings #1239
• [All] Fix override warning in option mode #1210
• [All] Small cleaning on sout and serr #1234
• [All] Standardize epsilons in SOFA #1049
• [All] Code cleaning of multiple classes #1116
• [All] Remove deprecated macro SOFA_TRANGLEFEM #1233
• [All] Remove references to "isToPrint" because it's broken #1197
• [All] Replace NULL by nullptr #1179
• [All] Try to reduce the number of compilation warnings #1196
• [SceneCreator] Pluginizing... #1109
• [SofaBaseLinearSolver] Remove virtual function BaseLinearSolver::isMultiGroup #1063
• [SofaBaseLinearSolver][FullMatrix] Restore fast clear function #1128
• [SofaFramework] Remove (painful) check/warning with Rigids #1229
• [SofaGUI] Split OpenGL and Qt dependency #1121
• [SofaGeneralObjectInteraction] Create delegate functions in AttachConstraint #1185
• [SofaGraphComponent] Update sceneCheckerAPI and deprecate MatrixMass #1107
• [SofaHAPI] Fixes for HAPI #1189
• [SofaKernel] ADD const specifier on notify methods in Node #1169
• [SofaKernel] Remove deprecated SOFA_DEBUG macro #1232
• [SofaMeshCollision] Clean deprecated code #1201
• [SofaSphFluid] Clean code of ParticleSource and update scenes #1190
• [SofaSphFluid] Reorder plugin code and scenes files #1165
• [SofaSphFluid] Several clean in the plugin components #1186
• [SofaSphFluid] missing namespace #1188
• [SofaTest] CLEAN msg in Multi2Mapping_test #1097
• [SofaTopologyMapping] Cleanups of some topological mappings + better initialization #1126
• [SofaViewer] Prevent the GUI to ouput every CTRL actions in the console #1130

Plugins / Projects

• [CGALPlugin] Some cleanups to CylinderMesh #1124
• [CGal plugin][CImgPlugin] Image data moved from Image/ to CImgPlugin/ #1104
• [Geomagic] Reorder plugin files for better modularization #1208
• [ManifoldTopologies] Undust and clean #1156

Examples / Scenes

• [Scenes] Clean some alias warnings #1098
• [scenes] Change OglModel to use a MeshObjLoader instead of loading the mesh internally. #1096

---

v19.06

Full log

Breaking

Modules

• [All] Run clang-tidy and update license headers #899
• [All] Refactor the loading of Xsp files. #918
• [SofaBaseTopology] Change triangles orientation in tetrahedron #878
• [SofaBaseTopology] Major Change in Topology Containers #967
• [SofaKernel] Refactor the MutationListener #917
• [SofaKernel] Some Topology cleaning... #866
• [SofaOpenglVisual] Fix ogl perf problem #1069

Modularizations

• [SofaExporter] Modularize (+minor dependency cleaning) #915
• [SofaHaptics] Modularize sofa haptics #945
• [SofaOpenglVisual] Pluginize. #1080

Improvements

Architecture

• [CMake] Rework sofa_generate_package #951
• [CMake] SofaMacros.cmake: deprecating sofa_create_package #909

Modules

• [All] Improve install and packaging #1018
• [All] Plugins finding and loading #913
• [All] Replace deprecated c++ standard binder component #908
• [SofaBaseMechanics] BarycentricMapping: spatial hashing, handle limit cases #896
• [SofaBaseTopology] Clean Topology logs and add AdvanceTimer logs #874
• [SofaBaseVisual] Add default texcoord in VisualModel #933
• [SofaConstraint] ADD control on constraint force in UniformConstraint #1027
• [SofaCore] Add possibilities to draw lines on surfaces in DrawTool #937
• [SofaCore] Collision visitor primitive tests count #930
• [SofaCore] ADD Datacallback and datalink #911
• [SofaEngine] Avoid Crash in BoxROI when rest_position is not yet defined #1031
• [SofaExporter] Add option for Regression_test to check first and last iteration #1061
• [SofaGeneralAnimationLoop] Improve MechanicalMatrixMapper #882
• [SofaGraphComponent] Run SceneChecker at each load #938
• [SofaGuiQt] Change the keyboard shortcut associated to camera mode #997
• [SofaGuiQt] Add a profiling window based on AdvanceTimer records #1028
• [SofaKernel] Some small changes in debug topology drawing #952
• [SofaKernel] Update Static Solver #950
• [SofaKernel] Rename TModels into CollisionModels and update all scenes #1034
• [SofaKernel] Add a new video recorder class VideoRecorderFFMPEG #883
• [SofaSimulationCore] Cpu task and scheduled thread support #970
• [SofaSimulationCore] call BaseObject::draw() during the Transparent pass #929
• [SofaTopologyMapping] Clean, fix, upgrade Tetra2TriangleTopologicalMapping #876

Plugins / Projects

• [Geomagic] Add some better check at init and method to free driver #925
• [Icons] EDIT Sofa icons #881
• [MultiThreading] TaskAllocator Interface #906
• [PluginExample] Update example + add comments #1053
• [Regression] ADD Regression as external project #1052
• [runSofa] ADD possibility to jump to source/instanciation of selected component #1013
• [SofaCUDA] Fix cuda with latest API #912
• [SofaPython] Add Sofa.hasViewer function #964
• [SofaPython] Change Base.addNewData #1004

Examples / Scenes

• [examples] Rename TModels into CollisionModels and update all scenes #1034

Bug Fixes

Architecture

• [CMake] Add check to prevent the inclusion of non-existant file in cmake 3.13 #897
• [CMake] Fix relocatable plugins #1059
• [CMake] FIX: exporting options in SofaFrameworkConfig.cmake #927
• [CMake] FIX: wrong paths of installed headers in SofaBaseMechanics #887
• [CMake] FIX build/install plugins directory #959

Modules

• [All] Three small fixes in SofaBaseLinearSolver, SofaBoundaryCondition, runSofa #931
• [All] FIXES made for RoboSoft2019 #1003
• [All] Fix some warnings #873
• [All] Several bug fixes #985
• [All] Some fixes to have a ... green dashboard! #982
• [All] Fix compilation with SOFA_NO_OPENGL flag #1032
• [SofaConstraint] Convert static sized arrays to dynamic ones in GenericConstraintSolver #920
• [SofaBaseMechanics] Fix barycentric mapping again #924
• [SofaBaseTopology] Fix Crash when loading a vtk file generated by Gmsh using TetrahedronSetTopologyContainer as container #1008
• [SofaBaseTopology] Fix right setDirty/clean topologyData #889
• [SofaBaseTopology][DrawTools] Some fix/update in topology internal draw methods. #877
• [SofaBaseTopology] Yet another fix in Tetra2triangleTopologicalMapping #998
• [SofaBaseTopology] Clean, fix, upgrade Triangle2EdgeTopologicalMapping #875
• [SofaBaseTopology] Fix crashes in Tetra2TriangleTopologicalMapping #960
• [SofaBoundaryCondition] Fix draw function in ConstantForcefield #1017
• [SofaDeformable] FIX issue 928 #942
• [SofaDeformable] Merge 2 ctor in SpringForceField #948
• [SofaExporter] FIX: out-of-tree include of SofaExporter header files #975
• [SofaGeneralLoader] Compute subElement by default for Gmsh format #986
• [SofaGeneralObjectInteraction] Fix AttachConstraint in case of FreeMotion (LM solving) #949
• [SofaGeneralObjectInteraction] Fix attach constraint radius #650
• [SofaGui] Fix missing profiling timers for BatchGUI and HeadlessRecorder #890
• [SofaGuiGlut] Fix compilation #1044
• [SofaGuiQt] FIX: component/nodes ordering in runSofa scene graph #1001
• [SofaGuiQt] REMOVE: public export of target SofaExporter #963
• [SofaGuiQt] Fix: several QWidget do not have a parent #1030
• [SofaHelper] FIX compilation on Visual Studio 2015 with QWT plugin #935
• [SofaHelper] FIX WinDepPack INSTALL_INTERFACE #1042
• [SofaHelper] REMOVE PluginManager::m_searchPaths #947
• [SofaKernel] Clean & Fix TopologyChangeVisitor and StateChangeVisitor behavior #880
• [SofaKernel] Clean output data when doUpdate in BoxROI #1056
• [SofaKernel] FIX deprecation message related to template types. #939
• [SofaKernel] FIX in TetrahedronFEMForceField & TetrahedronSetTopologyAlgorithm #973
• [SofaKernel] FIX operator>> in Mat.h and add corresponding test. #993
• [SofaKernel] FIX: A few fix to compile on Mac OSX Xcode 9 and Linux gcc 7.3.0 #969
• [SofaKernel] FIX: force name data to contain something #1009
• [SofaKernel] Fix error in MapperHexahedron and MapperQuad barycentric coef computation #1057
• [SofaKernel] Fix: remove unwanted AdvanceTimer::begin command #1029
• [SofaKernel] Remove warnings #968
• [SofaKernel] several small fix #953
• [SofaLoader] Fix positions when handleSeams is activated in MeshObjLoader #923
• [SofaMeshCollision] Fix TriangleModel to handle topology changes #903
• [SofaSimulationCore] Remove unjustified Assert in getSimulation() #1082
• [SofaSimulationCore] FIX CollisionVisitor::processCollisionPipeline #962
• [SofaTests] Fix small bugs in the Multi2Mapping_test #1078

Plugins / Projects

• [CImgPlugin] FIX: messed up package prefix in CImg #921
• [Geomagic] FIX compilation error in Geomagic plugin with removal of SOFA_FLOAT/DOUBLE #898
• [image] Fix image_gui plugin loading #1015
• [image] Message API is needed even if no python #1068
• [runSofa] FIX the opening of ModifyObject view. #1010
• [runSofa] Fix runSofa -a option with a gui. #1058
• [runSofa] User experience fixes in the ModifyData view. #1011
• [Sensable] Fix the compilation of the Sensable plugin #1019
• [SofaCUDA] Compilation error fix (CudaStandardTetrahedralFEMForceField.cu) #991
• [SofaCUDA] Fix several Cuda example scenes #1000
• [SofaCUDA] Fix windows compilation. #966
• [SofaPython] FIX allow the derivTypeFromParentValue to work with node. #984
• [SofaPython] FIX example broken by PR#459 #1020
• [SofaPython] FIX the broken Binding_Data::setValue() #1006
• [SofaPython] Fix duplicate symbol #1036
• [SofaPython] FIX: removing PythonLibs target from SofaPython #891
• [SofaPython] REMOVE: public export of target SofaExporter #963

Examples / Scenes

• [examples] Remove warnings in Demos/ scenes #1021
• [scenes] Fix chainAll demo scenario #987

Cleanings

Modules

• [All] For each data field's with a "filename" alias flip it with the data's name. #1024
• [All] Quick changes diffusion and mass #983
• [All] Remove duplicate ctor + prettify some code #1054
• [All] Replace serr with the new msg_error() API. #916
• [All] Several STC fixes #1048
• [All] Sofa defrost sprint week2 #884
• [All] minor cleaning of warnings and bugfix #886
• [All] Remove bunch of warnings (again) #1065
• [All] remove #ifdef SOFA_HAVE_GLEW #1077
• [SofaLoader] Change error into warning in MeshVTKLoader #1037
• [SofaConstraint] Replaced sout calls by msg_info() in LCPConstraintSolver #981
• [SofaGeneralLinearSolver] Clean BTDLinearSolver #907
• [SofaHaptics] Replace deprecated INCLUDE_ROOT_DIR in CMakeLists.txt #1023
• [SofaKernel] Brainless Warnings cleaning #971
• [SofaKernel] Minor code refactor in BaseData & new StringUtils functions. #860
• [SofaKernel] Refactor DataTrackerEngine so it match the DataCallback #1073
• [SofaKernel] Remove annoying warning #1062
• [SofaKernel] Remove boost::locale dependency #1033
• [SofaKernel] Remove usage of helper::system::atomic (replaced by STL's) #1035
• [SofaKernel] Several changes in Topology components #999
• [SofaKernel] minor cleaning in mesh loader #1025
• [SofaKernel] Remove multigroup option in MatrixLinearSolver #901
• [SofaRigid] Clean JointSpringFF #850
• [SofaRigid] Cosmetic clean in RigidRigidMapping & msg_* update. #1005
• [SofaSimpleFem] Use msg and size_t in TetraDiff #1016

Plugins / Projects

• [image] Add warning guiding users regarding pluginization of DiffusionSolver #1067
• [Modeler] Deactivate Modeler by default, since it is deprecated #972

Examples / Scenes

• [Scenes] Apply script on all scenes using VisualModel/OglModel #1081

---

v18.12

Full log

Deprecated

Removed in v18.12

• [SofaBoundaryCondition] BuoyantForceField #457
• [SofaBoundaryCondition] VaccumSphereForceField #457
• [SofaHelper] Utils::getPluginDirectory() #518 - Use PluginRepository.getFirstPath( ) instead
• [SofaMisc] ParallelCGLinearSolver #457
• [SofaMiscForceField] ForceMaskOff #457
• [SofaMiscForceField] LineBendingSprings #457
• [SofaMiscForceField] WashingMachineForceField #457
• [SofaMiscForceField] LennardJonesForceField #457
• [SofaMiscMapping] CatmullRomSplineMapping #457
• [SofaMiscMapping] CenterPointMechanicalMapping #457
• [SofaMiscMapping] CurveMapping #457
• [SofaMiscMapping] ExternalInterpolationMapping #457
• [SofaMiscMapping] ProjectionToLineMapping #457
• [SofaMiscMapping] ProjectionToPlaneMapping
• [SofaOpenglVisual] OglCylinderModel #457
• [SofaOpenglVisual] OglGrid #457
• [SofaOpenglVisual] OglRenderingSRGB #457
• [SofaOpenglVisual] OglLineAxis #457
• [SofaOpenglVisual] OglSceneFrame #457
• [SofaUserInteraction] ArticulatedHierarchyBVHController #457
• [SofaUserInteraction] ArticulatedHierarchyController #457
• [SofaUserInteraction] DisabledContact #457
• [SofaUserInteraction] EdgeSetController #457
• [SofaUserInteraction] GraspingManager #457
• [SofaUserInteraction] InterpolationController #457
• [SofaUserInteraction] MechanicalStateControllerOmni #457
• [SofaUserInteraction] NodeToggleController #457

Breaking

Modules

• [SofaBaseMechanics][SofaMiscForceField] Homogeneization of mass components in SOFA #637
• [SofaBaseMechanics] Clean barycentric mapping #797
• [SofaBoundaryCondition] Refactor FixedPlaneConstraint (breaking) #803
• [SofaFramework] [BREAKING] Replacing DataEngine with SimpleDataEngine #814
• [SofaFramework] [BREAKING] Rename: data tracker has changed #822
• [SofaPreconditioner] modularization #668
• [SofaSparseSolver] modularization #668

Improvements

Architecture

• [CMake] use ccache if available #692
• [Cmake] Add a findCython.cmake #734
• [CMake] ADD QtIFW generator + improvements #796
• [SofaMacros] ADD CMake macro to create pybind11 & cython targets and modules #859( #859 )

Modules

• [All] Use drawtool everywhere #704
• [All] Sofa add mechanical matrix mapper #721
• [SofaBaseTopology] Add battery of tests on topology containers #708
• [SofaBaseTopology] Topology change propagation to Mechanical State #838
• [SofaBaseMechanics] Optimize barycentric mapping initialization #798
• [SofaBoundaryCondition] Factorize partial fixedconstraint #718
• [SofaConstraint] add a force data field in SlidingConstraint #780
• [SofaConstraint] ADD Data to show constraint forces #840
• [SofaConstraint] allow call of constraints' storeLambda() #854
• [SofaCore] Add new (simpler) DataEngine implementation #760
• [SofaExporter] ADD in WriteState all required tests on data and clean export with msg API #714
• [SofaFramework] Improve external dirs fetching in SofaMacros #759
• [SofaGeneralAnimationLoop] Improvement on MMMapper #772
• [SofaHelper] EDIT FileSystem and FileRepository for regression tests #830
• [SofaKernel] Improve Displayflags #671
• [SofaKernel] Add a "sofa_add_module" in SofaMacro.cmake #732
• [SofaKernel] use string in base object description #862
• [SofaMeshCollision] TriangleModel optimization when topology changes occur #839
• [SofaSparseSolver] ADD saveMatrixToFile to SparseLDLSolver #845
• [SofaTest] ADD a PrintTo method so test failure shows human readable informations. #730
• [VisualModel] Improve the messages when loading mesh inside VisualModel #778
• [WriteState] minor fix with the time attribute, default values #776

Plugins / Projects

• [Geomagic] ADD an inputForceFeedback data in Geomagic #648
• [Geomagic] Fix dll export and some enhancements #786
• [MultiThreading] removed the boost thread dependency #701
• [MultiThreading] New components and Task scheduler classes refactoring #745
• [MultiThreading] Add Image plugin Data types in DataExchange component #770
• [MultiThreading] TaskScheduler Interface #775
• [runSofa] Add data field value change on mouse move #750
• [SofaCarving] Refresh and enhancement #712
• [SofaCarving] plugin enhancement #787
• [SofaPython] ADD forwarding of onMouseMove event into the script controller #731
• [SofaPython] ADD: Bindings for BoundingBox #736
• [SofaPython][PSDE] Psde derive io #742
• [SofaPython][PSDE] Update on demand as designed initially #751
• [SofaPython] ADD a custom dir method in Binding_Base. #762
• [SofaPython] add getLinkedBase to the binding of a link. #843
• [SofaPython] ADD binding python to getCategories #868

Bug Fixes

Architecture

• [CMake] FIX: cyclic recursion #766
• [CMake] Backport fixes #791
• [CMake] Fix compilation issues due to CPackNSIS #867
• [CMake] Add check to prevent the inclusion of non-existant file in cmake 3.13 #897

Modules

• [All] ISSofa bugfix, lot of fixes #756
• [All] FIX Windows linkage #910
• [SofaGuiQt] Change method to allow antialiased screenshots in QtViewer #728
• [SofaBaseMechanics] Fix warning scene mass #779
• [SofaBaseMechanics] FIX DiagonalMass_test #832
• [SofaBaseTopology] Fix SparseGridTopology initialization with an input mesh #670
• [SofaBoundaryCondition] FIX AffineMovementConstraint orientation issue #824
• [SofaCarving] Modify the CMake config file to allow other plugins link to Sofa Carving #781
• [SofaCore] FIX: enable ExtVecXf mappings with double floating type #827
• [SofaDeformable] Fix MeshSpring ForceField and Loader #815
• [SofaFramework] Keep SOFA_EXTERN_TEMPLATE macro definition #870
• [SofaGui] ADD option to enable VSync (default: OFF) #722
• [SofaOpenglVisual] Rollback removal of Ogl components #905
• [SofaKernel] FIX bug in toEulerVector #399
• [SofaKernel] FIX segfault created by static initialisers on OSX/clang compiler #642
• [SofaKernel] Fix: correct path writing in sofa_set_python_directory macro #763
• [SofaKernel] Check if Quaternion has norm 1 #790
• [SofaPreconditioner] FIX ShewchukPCGLinearSolver #737

Plugins / Projects

• [CGALPlugin] fix compilation #783
• [CGALPlugin] Fix compilation for cgal 4.12+ (cgal::polyhedron_3 is now forward declared) #812
• [CImgPlugin] CMake/Mac: lower priority for XCode's libpng #720
• [Geomagic] Fix broken behavior #761
• [Geomagic] Fix scenes #858
• [Multithreading] FIX compiling error on Mac #727
• [MultiThreading] Fix Livers scenes crash #792
• [runSofa] ADD Modules to plugin_list.conf.default #753
• [SofaPython][examples] FIX: Fixing the scene... and the typo in the name #765
• [Tutorials] FIX oneTetrahedron and chainHybrid #773

Examples / Scenes

• [examples] Fix TopologySurfaceDifferentMesh.scn #716
• [examples] Fix the examples missing a #748
• [examples] Fix scenes having issue with CollisionGroup #821

Cleanings

Modules

• [All] Fix some recent compilation warnings #726
• [All] Replace some int/unit by size_t #729
• [All] Fix some C4661 warnings #738
• [All] FIX warnings #739
• [All] Fix some compilation warnings #755
• [All] FIX a bunch of static-analysis errors (cppcheck) #782
• [All] Remove SOFA_DECL_CLASS and SOFA_LINK_CLASS #837
• [All] Remove SOFA_SUPPORT_MOVING_FRAMES and SOFA_SUPPORT_MULTIRESOLUTION #849
• [SofaBaseCollision] CLEAN CylinderModel #847
• [SofaBaseLinearSolver] CLEAN GraphScatteredTypes #844
• [SofaFramework] Various cleaning (non-breaking) #841
• [SofaFramework] CLEAN: removing unused PS3 files #851
• [SofaGeneralSimpleFEM] Clean BeamFemForceField #846
• [SofaHelper] Change drawTriangle and drawQuad with internal functions #813
• [SofaHelper] Update ComponentChange with removed Components #905
• [SofaKernel] Remove commented code since years in SofaBaseMechanics #733
• [SofaKernel] Move ScriptEvent class from SofaPython to core/objectModel #764
• [SofaMiscFem] Clean BaseMaterial::handleTopologyChange #817
• [SofaMiscMapping] Clean DeformableOnRigidFrameMapping #848
• [SofaSimpleFem] Stc clean simplefem #826

Plugins / Projects

• [Multithreading] Move TaskScheduler files from MultiThreading plugin to SofaKernel #805

Examples / Scenes

• [examples] Remove scenes about deprecated components #922

---

v18.06

Full log

Deprecated

Will be removed in v18.06

• [SofaHelper] Utils::getPluginDirectory() #518 - Use PluginRepository.getFirstPath( ) instead

Will be removed in v18.12

• [SofaBoundaryCondition] BuoyantForceField #457
• [SofaBoundaryCondition] VaccumSphereForceField #457
• [SofaMisc] ParallelCGLinearSolver #457
• [SofaMiscForceField] ForceMaskOff #457
• [SofaMiscForceField] LineBendingSprings #457
• [SofaMiscForceField] WashingMachineForceField #457
• [SofaMiscForceField] LennardJonesForceField #457
• [SofaMiscMapping] CatmullRomSplineMapping #457
• [SofaMiscMapping] CenterPointMechanicalMapping #457
• [SofaMiscMapping] CurveMapping #457
• [SofaMiscMapping] ExternalInterpolationMapping #457
• [SofaMiscMapping] ProjectionToLineMapping #457
• [SofaMiscMapping] ProjectionToPlaneMapping
• [SofaOpenglVisual] OglCylinderModel #457
• [SofaOpenglVisual] OglGrid #457
• [SofaOpenglVisual] OglRenderingSRGB #457
• [SofaOpenglVisual] OglLineAxis #457
• [SofaOpenglVisual] OglSceneFrame
• [SofaUserInteraction] ArticulatedHierarchyBVHController #457
• [SofaUserInteraction] ArticulatedHierarchyController #457
• [SofaUserInteraction] DisabledContact #457
• [SofaUserInteraction] EdgeSetController #457
• [SofaUserInteraction] GraspingManager #457
• [SofaUserInteraction] InterpolationController #457
• [SofaUserInteraction] MechanicalStateControllerOmni #457
• [SofaUserInteraction] NodeToggleController #457

Breaking

Modules

• [SofaConstraint] Update FreeMotionAnimationLoop so that it can compute a linearised version of the constraint force. #459
• [SofaCore] Update FreeMotionAnimationLoop so that it can compute a linearised version of the constraint force. #459
• [SofaHelper] Unifying the way we report file related errors #669

Improvements

Architecture

• [CMake] ADD external projects handling #649
• [CMake] ADD the CMAKE_WARN_DEPRECATED option in SOFA #662
• [CMake] Improve SOFA installation and packaging #635
• [CMake] Cleans for packaging #789

Modules

• [All] Refactoring in Camera, BackgroundSetting and Light #676
• [SofaBaseLinearSolver] Improve warning emission for CG #658
• [SofaBaseLinearSolver] Add ability to activate printing of debug information at runtime #667
• [SofaGeneralImplicitOdeSolver] FIX data field name in VariationalSymplecticSolver #624
• [SofaGraphComponent] ADD alias usage detection #702
• [SofaLoader] ADD support to load VTK polylines in legacy formated files #576
• [SofaMiscMapping] Fix rigid barycentric mapping #710
• [SofaHelper] PluginManager now checks for file existence instead of library extension match. #621

Plugins / Projects

• [HeadlessRecorder] ADD frameskip option to headless recorder #615
• [HeadlessRecorder] Remove avcodec dependency in HeadlessRecorder.h #752
• [runSofa] Save&restore the scenegraph state when live-code & add info panel #657
• [SofaPython] PythonScriptDataEngine (PSDE) #583
• [SofaPython] Small fix & new features. #656

Tools

• [tools] FIX sofa-launcher stdout #592

Bug Fixes

Modules

• [All] FIX VS2017 build (Windows) #630
• [All] Fix computeBBox() #634
• [All] FIX warnings #584
• [All] Various small changes in error messages & bugfix from defrost branches #660
• [SofaConstraint] FIX: Moving semicolon under preprocessor define #680
• [SofaEngine] FIX Bug in BoxROI that is not properly initialized #627
• [SofaFramework] Fix plugin list configuration #645
• [SofaGraphComponent] FIX SceneChecker_test + ADD alias test #711
• [SofaGraphComponent] FIX SceneCheck build on MacOS #719
• [SofaGuiQt] FIX missing resources #758
• [SofaGeneralEngine] FIX disabled tests #675
• [SofaHelper] More robust method to test end of string #617
• [SofaKernel] FIX macro issue resulted from the #include cleaning. #672
• [SofaMiscFem] FIX dependencies #588
• [SofaOpenglVisual] FIX MacOS crash in batch mode #646
• [SofaSimulationGraph] FIX dependencies #588
• [SofaSparseSolver] FIX SparseLDL crash and add proper SOFA_FLOAT/DOUBLE mangement #655

Plugins / Projects

• [CGALPlugin] FIX compilation issue with recent version of CGAL (4.11) & Ubunu 18.04 LTS #664
• [CImgPlugin] Export CImg_CFLAGS #595
• [CImgPlugin] FIX CMakeLists install fail since pluginization #609
• [CImgPlugin] FIX malformed cflag append #622
• [HeadlessRecorder] Fix headless recorder stream definition #666
• [MultiThreading] FIX: add createSubelements param in MeshGmshLoader #626
• [runSofa] Fix compilation when SofaGuiQt is not activated #599
• [runSofa] ADD infinite iterations option to batch gui #613
• [runSofa] FIX missing resources #758
• [SofaDistanceGrid] ADD .scene-tests to ignore scene #594
• [SofaPython] FIX build for MacOS >10.13.0 #614

Examples / Scenes

• FIX collision of the fontain example #612
• FIX failing scenes on CI #641
• FIX missing RequiredPlugin #628

Extlibs

• [extlibs/gtest] Update gtest & clean the CMakeLists.txt #604

Cleanings

Architecture

• [CMake] Remove the option SOFA_GUI_INTERACTION and its associated codes/macro #643

Modules

• [All] CMake: Remove COMPONENTSET, keep DEPRECATED #586
• [All] CLEAN topology classes #693
• [SofaHelper] CLEAN commented code and double parentheses in Messaging.h #587
• [SofaKernel] Header include cleanup #638
• [SofaKernel] Remove unused function "renumberConstraintId" #691

Plugins / Projects

• [CImgPlugin] Less scary config warnings #607
• [HeadlessRecorder] Handle errors in target config #608
• [SofaGUI] Move GlutGUI to projects and remove all glut references in SofaFramework #598
• [SofaGUI] CMake: Remove useless if block in qt CMakelists.txt #590
• [SofaPhysicsAPI] FIX: remove the include of glut #659

---

v17.12

Full log

Deprecated

Kernel modules

• Will be removed in v17.12

  • [All]
    • SMP support [#457]( #457 - no more maintained )
  • [SofaDefaultType]
    • LaparoscopicRigidType #457 - not used/dont compiled for a really long time

• Will be removed in v18.06

  • [SofaHelper]
    • Utils::getPluginDirectory() #518 - Use PluginRepository.getFirstPath( ) instead

Other modules

• Will be removed in v18.12
  • [SofaBoundaryCondition]
    • BuoyantForceField #457
    • VaccumSphereForceField #457
  • [SofaMisc]
    • ParallelCGLinearSolver #457
  • [SofaMiscForceField]
    • ForceMaskOff #457
    • LineBendingSprings #457
    • WashingMachineForceField #457
    • LennardJonesForceField #457
  • [SofaMiscMapping]
    • CatmullRomSplineMapping #457
    • CenterPointMechanicalMapping #457
    • CurveMapping #457
    • ExternalInterpolationMapping #457
    • ProjectionToLineMapping #457
    • ProjectionToPlaneMapping
  • [SofaOpenglVisual]
    • OglCylinderModel #457
    • OglGrid #457
    • OglRenderingSRGB #457
    • OglLineAxis #457
    • OglSceneFrame
  • [SofaUserInteraction]
    • AddRecordedCameraPerformer #457
    • ArticulatedHierarchyBVHController #457
    • ArticulatedHierarchyController #457
    • DisabledContact #457
    • EdgeSetController #457
    • FixParticlePerformer #457
    • GraspingManager #457
    • InciseAlongPathPerformer #457
    • InterpolationController #457
    • MechanicalStateControllerOmni #457
    • NodeToggleController #457
    • RemovePrimitivePerformer #457
    • StartNavigationPerformer #457
    • SuturePointPerformer #457

Breaking

Kernel modules

• [All]
  • issofa_visitors: Changing the way projective constraints are propagated in visitors #216
• [SofaDeformable]
  • Change how rest shape is given in RestShapeSpringsForceField #315

Other modules

• [SofaHelper]
  • Rewrite ArgumentParser #513
• [SofaValidation]
  • ADD Monitor test #312

Improvements

Kernel modules

• [All]
  • issofa_topology: Improvement, BugFix and Cleaning on Topology #243
  • issofa_constraintsolving: improve constraints #484
  • Improve File:line info in error message (for python and xml error reporting) #314
• [SofaDeformable]
  • issofa_meshspringff #497
  • issofa_springff #498
• [SofaHelper]
  • add ability to use NoArgument for BaseCreator and Factory #385
  • Remove legacy ImageBMP/ImagePNG and ImageQt #424
  • Improve advanced timer #468
• [SofaLoader]
  • ADD normals and vectors to Legacy vtk import #536
• [SofaSimpleFem]
  • Add check of vector size in TetrahedronFEMForceField #341

Other modules

• [All]
  • Fix default value rayleigh params #350
  • PSL branch prerequisites #410
  • template alias sptr for downsizing the include graph #436
  • Removing the typedef files + SOFA_DECL + SOFA_LINK #453
  • CHANGE USE_MASK option to off by default #532
• [SofaBoundaryCondition]
  • ADD flag PROJECTVELOCITY #288
  • make LinearMovementConstraint accept absolute movements #394
• [SofaCore]
  • Add some read/write free method to construct Data Read/WriteAccessor #450
• [SofaDefaulttype]
  • MapMapSparseMatrix conversion utils with Eigen Sparse #452
  • multTranspose method between MapMapSparseMatrix and BaseVector #456
• [SofaDeformable]
  • Rest shape can now be given using SingleLink #315
  • Add AngularSpringForceField #334
• [SofaEulerianFluid]
  • Pluginizing the module #396
• [SofaExporter]
  • Clean & test the exporter #372
• [SofaGraphComponent]
  • Add SceneCheckerVisitor to detect missing RequiredPlugin #306
  • Add a mechanism (SceneChecker) to report API & SceneChange to users #329
  • Refactor the SceneChecker and add a new SceneChecker to test dumplicated names #392
• [SofaGeneralEngine]
  • Add test and minor cleaning for IndexValueMapper #319
  • Add a computeBBox to the SmoothMeshEngine #409
• [SofaGeneralObjectInteraction]
  • issofa_attachconstraint #501
• [SofaMisc]
  • Add a data repository at start-up time #402
• [SofaMiscCollision]
  • Pluginizing the module #453
• [SofaMiscFem]
  • Add hyperelasticity fem code in SOFA #349
• [SofaSimpleFem]
  • ADD computeBBox and test to HexaFEMForceField #289
• [SofaSphFluid]
  • Pluginizing the module #453
• [SofaVolumetricData]
  • Split the module in two plugins #389

Plugins / Projects

• [CGALPlugin]
  • Add new functionality for mesh generation from image: definition of features #294
• [meshconv]
  • Improve the CMake config of meshconv requiring miniflowVR to compile #358
• [PSL]
  • Experimental : Add PSL for 17.12 #541
• [runSofa]
  • autoload plugins (2nd version) #301
  • Extend the live coding support, message API available for nodes, add an openInEditor #337
  • add verification if help is not null from displayed data #382
  • improve the html DocBrowser #540
• [SceneChecker]
  • Add mechanism to report API & SceneChange to users #329
• [SofaDistanceGrid]
  • Pluginizing SofaVolumetricData #389
• [SofaImplicitField]
  • Pluginizing SofaVolumetricData #389
• [SofaMiscCollision]
  • Pluginizing the module #453
• [SofaPython]
  • Add unicode to string convertion and a warning message in Binding_BaseContext::pythonToSofaDataString #313
  • Add unicode to string convertion in Binding_BaseData::SetDataValuePython #313
  • Add a test #313
  • Add GIL management #326
  • Add support for Sofa.msg_ with emitter other than a string #335
  • Adding new features for AdvancedTimer #360
  • forward sys.argv to python scripts #368
  • sparse matrix aliasing scipy/eigen #411
• [SofaSphFluid]
  • Pluginizing the module #453

Other

• [Tools]
  • Update astyle config #550

Bug Fixes

Kernel modules

• [All]
  • CMake: Fix and clean boost, when using Sofa as an external lib #421
  • Fix computeBBox functions #527
  • CMake: FIX Boost::program_options finding in install #618
• [SofaBaseLinearSolver]
  • FIX no step if condition on denominator is met at first step #521
  • FIX breaking condition in CG at first step regarding threshold #556
• [SofaBaseMechanics]
  • Make sure the mechanical object's state vectors size matches their respective argument size #406
• [SofaBaseTopology]
  • FIX wrong clean in PointSetTopologyModifier #380
• [SofaComponentCommon]
  • Always register all its components in the object factory #488
• [SofaCore]
  • FIX CreateString problem on root node #377
  • FIX don't inline exported functions #449
• [SofaDefaultType]
  • FIX Mat::transpose() and Mat::invert() #317
  • Correct CMake include_directories directive for SofaDefaultType target's #403
  • Fix compilation errors when working with transform class #506
• [SofaHelper]
  • Fix CUDA compilation with pointer of data #320
  • FIX livecoding of shaders #415
  • fixing Polynomial_LD #442
  • Replacing afficheResult with resultToString #473
  • FIX Remove override warnings #520
  • Fix memory leak while capturing screenshot #533
  • FIX Windows relative path from runSofa #568
• [SofaRigid]
  • RigidMapping: fixed setRepartition backward compatibility #441
• [SofaSimulationCommon]
  • Fix a minor regression introduced during the post-sprint #476
• [SofaSimulationCore]
  • Add stop in add_mbktomatrixVisitor #439

Other modules

• [All]
  • Fix warnings and strange double incrementation on iterator #364
  • installing gtest headers for separate plugin builds #395
  • Fix override warnings #423
  • FIX Sofa installation failure (tries to install non-existing files) #470
  • ADD _d suffix for debug libs #511
• [SofaBoundaryCondition]
  • Fix LinearForceField that disappears #525
  • FIX Removed incorrect warning from LinearForceField #384
• [SofaConstraint]
  • Fix error due to MacOS >= 10.11 using a relative filename #325
  • Fix issue in GenericConstraintCorrection #567
• [SofaDeformable]
  • Fix RestShapeSpringsForceField #367
• [SofaExporter]
  • FIX allow to extend VTKExporter in a plugin #309
• [SofaGeneralEngine]
  • Fix some XyzTransformMatrixEngine::update() function #343
• [SofaGeneralImplicitOdeSolver]
  • fix test #478
• [SofaGraphComponent]
  • Fix the test that was wrong and thus failing in SceneChecker #405
  • Fix a crashing bug in SceneCheckAPIChange. #479
  • FIX SceneChecker & RequiredPlugin #563
• [SofaGeneralObjectInteraction]
  • Remove stiffness multiplicator in SpringForceField #290
• [SofaMiscFem]
  • Fix FastTetrahedralCorotationalFF topology change #554
• [SofaOpenglVisual]
  • Fix a bug crashing sofa when the textures cannot be loaded. #474

Extlibs

• [CImg]
  • Refactor CImg & CImgPlugin #562
• [Eigen]
  • Warning fix with eigen when compiling with msvc #447
• [libQGLViewer]
  • FIX missing headers #461
  • Update libQGLViewer to 2.7.1 #545

Plugins / Projects

• [CGALPlugin]
  • Fix build problem #351
  • FIX build error with CGAL > 4.9.1 #515
• [CImgPlugin]
  • Use sofa cmake command to create proper package #544
  • Refactor CImg & CImgPlugin #562
  • prevent INT32 redefinition by libjpeg on Windows #566
• [ColladaSceneLoader]
  • FIX Assimp copy on Windows #504
• [Flexible]
  • Refactor CImg & CImgPlugin #562
• [image]
  • Refactor CImg & CImgPlugin #562
• [Meshconv]
  • fix build if no miniflowVR #358
• [MultiThreading]
  • FIX: examples installation #299
  • Fix build with Boost 1.64.0 #359
  • FIX Windows dll loading #507
• [runSofa]
  • FIX plugin config copy on Windows #451
  • remove non-ASCII chars in string #327
  • FIX PluginRepository initialization #502
• [SofaCUDA]
  • Fix compilation problem with cuda. #320
  • Fix: Headers of the SofaCUDA plugin are now installed in the include folder #383
  • FIX Configuration/compilation issue with CUDA plugin #523
  • Fix linearforcefield that disappears #525
• [SofaGui]
  • FIX draw scenes on classical and retina screens #311
  • Fixes #183 : Use the qt menu instead of the native one in Mac OS #366
  • fix ImageBMP issue + remove Laparoscopic stuff #499
  • Pickhandler minor fixs #522
  • Fix: Intel graphics on linux now overrides the core profile context #526
• [SofaImplicitField]
  • Fix package configuration #422
• [SofaPhysicsAPI]
  • FIX: compilation due to Sofa main API changes #549
• [SofaPython]
  • Fix python live coding that is broken #414
  • FIX crash in python script when visualizing advanced timer output #458
  • FIX error in script for plotting advancedTimer output #519
  • Fix python unicode data #313
• [SofaSPHFluid]
  • Fix invalid plugin initialization. #467
• [SofaVolumetricData]
  • Fix package configuration #422
• [SceneCreator]
  • FIX build error with AppleClang 6.0.0.6000051 #483
• [THMPGSpatialHashing]
  • Fix build with Boost 1.64.0 #359

Scenes

• Fix scenes #310
• Fix scenes with bad RegularGrid position relative to 270 #324
• Fix scenes errors and crashes #505
• FIX all scenes failures 17.12 #565

Cleanings

Kernel modules

• [All]
  • replace a bunch of std::cerr, std::cout, prinf to use msg_* instead #339
  • More std::cout to msg_* cleaning #370
  • FIX removed compilation warnings #386
  • Clean BaseLoader & Remove un-needed #includes #393
  • Remove last direct calls of OpenGL in modules #425
  • warning removal #454
  • Refactor SofaTest to cut dependencies #471
  • Modularizing config.h #475
  • EDIT: use PluginRepository instead of Utils::getPluginDirectory #518
• [SofaBaseLinearSolver]
  • Add comments in the CGLinearSolver #469
• [SofaBaseVisual]
  • Clean API message #503
• [SofaDefaultType]
  • remove warning generated by MapMapSparseMatrixEigenUtils #485
• [SofaHelper]
  • mute extlibs warnings #397
  • FileMonitor_windows compilation #448
  • Clean API message #503

Other modules

• [SofaGeneralEngine]
  • add test and minor cleaning for IndexValueMapper #319
• [SofaGeneralObjectInteraction]
  • Remove stiffness multiplicator in SpringForceField #290
• [SofaValidation]
  • move code to set default folder for monitor to init function #500

Plugins / Projects

• [All]
  • FIX: compilation warnings #361
• [CGALPlugin]
  • Fix warnings #361
• [image]
  • Fix warnings #361
• [Registration]
  • Remove deprecated scene #331
• [SofaPython]
  • General cleaning #304
  • Fix warnings #361
  • print cleaning + SofaPython quaternion dot product #404
• [runSofa]
  • Clean : remove non-ASCII chars in string #327

---

v17.06

Full log

New features

For users

• [SceneCreator]
  • new methods to add basic 3D object: Cube, Cylinder, Sphere and Plane. In rigid or deformable.
• [GeneralTopology]
  • SphereGridTopology component to create sphere grids, similar to CylinderGridTopology.
• Adds a new orientedBox dataField in BoxROI so that we can use it to either defined AABoxes or OrientedBox
• Minor improvement on the way warning/error message are presented to the users in runSofa. A single panel is now used instead of of two, it is always displayed, the Panel name also contains the number of message eg: "Messages(5)"
• The Graph view is now displaying the type of message they contains.
• [runSofa]
  • Autoload plugins, described in the user-custom file 'plugin_list.conf' if present; else 'plugin_list.conf.default' containing all compiled plugins and generated automatically by CMake.

For developpers

• Add a Logger component that stores the history of messages into each sofa component.
• Implements new methods to write on-liner's conditional message: msg_info_when(level<3) << "This is a conditional info message"
• Implement an implicit version of each of the msg_* API allowing to write msg_info() << "Hello" in place for msg_info(this) << Hello"
• CImgPlugin : creation of a dedicated plugin for image loading based on CImg #185
• Remove deprecated miniBoost dependency #273

Improvements

Modules

• [All]
  • update containers to support c++x11 features #113
  • speed up spheres rendering + code cleaning #170
  • updates externs/gtest to a fresh checkout #213
  • auto-init/cleanup libraries #168
  • Improve and clean msg_api and logging of message (#190, #255, #275). See documentation for more information.
  • Add CMake option to limit cores used to build specific targets #254
  • Fix rgbacolor parsing #305
  • CMake: installing gtest headers for separate plugin builds #395
• [SofaKernel]
  • Update the RichConsoleStyleMessageFormatter #126
  • creation of a defaulttype::RGBAColor #119
  • add a new method in BaseObjectDescription #161
  • adding listener mechanism to SceneLoader #205
  • common usage for DiagonalMass and tests #230
  • add tests for DataFileName #250
  • add tests for DefaultAnimationLoop #258
  • add tests for LocalMinDistance #258
  • add a way to convert message type to string in Message.cpp #213
  • MeshSTL.cpp replace a std:cerr by a msg_error so that FIX the corresponding failing test #213
  • adding listener mechanism to SceneLoader #204
  • Grid Topologies cleanup + new SphereGrid #164
  • Add CMake option SOFA_WITH_EXPERIMENTAL_FEATURES (default OFF) to enable MechanicalObject::buildIdentityBlocksInJacobian #276
• [SofaGraphComponents]
  • add tests for RequiredPlugin #258
• [SofaHelper]
  • GLSL: load shader source code from a standard string #158
• [SofaBaseTopology]
  • GridTopology : implement "flat" grids in 1 or 2 dimension by using setting grid resolution to "1" in the corresponding axis, and associated examples #270
  • add tests for RegularGridTopology #270
• [SofaEngine]
  • BREAKING: Add oriented box feature to BoxROI #108
• [SofaConstraint]
  • add instantiation of constraint corrections with Vec2f #157
• [SofaOpenglVisual]
  • add tests for ClipPlane #258
• [SofaVolumetricData]
  • add tests for DistanceGrid #258
  • add tests for Light #258
• [SofaBoundaryCondition]
  • add tests for ConstantForceField, some of them are OpenIssue demonstrating existing problem, as crashing sofa when using negative or too large values in indices #258
• [CI]
  • improvement of all test scripts

Plugins / Projects

• [GUI]
  • mouse events are now transmitted to the scene with QtGLViewer #132
• [SceneCreator]
  • Cosmetic changes and remove un-needed include #169
• [SofaPython]
  • Macros to bind "sequence" types #165
  • ModuleReload #214
  • light module reload #202
  • change the way createObject() handle its arguments to simplify scene writing + batch of tests #286
• [SofaTest]
  • add Backtrace::autodump to all tests to ease debugging #191
  • add automatic tests for updateForceMask #209
  • add tests on PluginManager #240
  • TestMessageHandler : new and robust implementation to connect msg_* message to test failure #213
  • update to use the new TestMessageHandler where msg_error generates test failures #213
  • add tests for TestMessageHandler #213
• [SofaCUDA]
  • FIX NVCC flags for debug build on Windows #300

Bug Fixes

Modules

• Warnings have been fixed #229
• [All]
  • check that SofaPython is found before lauching the cmake sofa_set_python_directory command #137
  • use the cmake install DIRECTORY instead of FILES to preserve the files hierarchy when installing #138
  • fixing issue related to parsing attributes with atof/atoi #161
  • unify color datafield #206
  • Fix CMakeLists bug on Sofa.ini and installedSofa.ini creation #291
  • Fix a lot of failing tests (#271, #279)
  • Fix compilation with SOFA_FLOATING_POINT_TYPE as float #262
  • CMake: Fix and clean boost, when using Sofa as an external lib #421
• [SofaKernel]
  • Fix the Filemonitor_test random failure on MacOs #143
  • implement a numerical integration for triangle #249
  • add brace initializer to helper::vector class #252
  • Activates thread-safetiness on MessageDispatcher. #257
  • Fix getRelativePath() in DataFileName #250
  • FileRepository::getRelativePath() lowering the case on WIN32 is now a deprecated behavior #264
  • Fix FileRepository should not be optional #122
  • FileMonitor: fix the recurrent problem with file 'SofaKernel/framework/framework_test/resources/existing.txt' pointed in Issue #146 #258
  • Fix wrong inline in exported functions #449
• [SofaFramework]
  • fix the integration scheme for Quaternion #172 and fix values with which the quaternion is being compared after creation from euler angles
• [SofaHelper]
  • VisualToolGL: fix single primitive calls #293
  • ImagePNG: Fix library linking in debug configuration under MSVS #298
• [SofaBaseMechanics]
  • MechanicalObject: cleaning: symbols & include #249
• [SofaPhysicsAPI]
  • fix compilation of the project #167
• [SofaUserInteraction]
  • MouseInteractor: FIX the mouse picking on Mechanical Object #282

Plugins / Projects

• [image]
  • Fixes #135 : Check that SofaPython is found before including python directory #137
  • Fixes #136 : Use the cmake install DIRECTORY instead of FILES #138
• [LeapMotion]
  • FIX compilation for LeapMotion plugin due to moved files #296
• [runSofa]
  • Fix minor consistency issues related to the readOnly flag #115
• [SofaTest]
  • repair the minor API breaks introduced by PR #213 #269

Scenes

• Components/engine/GenerateGrid.scn was fixed #303

Cleanings

Modules

• [All]

  • clean the consistency issues related to the readOnly flag #115
  • Clean licenses #139

• [SofaKernel]

  • clean DefaultPipeline.cpp/h (API BREAKING)
  • clean the attributes names in BoxROI (API BREAKING)
  • TetrahedronFEMForceField clean code #270
  • GridTopology : clean the code & factor the constructor #270
  • RegularGridTopology : clean the constructor's code & remove NDEBUG code #270
  • MechanicalObject : removal of code specific to the grid #270

• [SofaVolumetricData]

  • Light: clean and strenghening the interface #258
  • DistanceGrid

• [SofaBoundaryCondition]

  • ConstantForceField: clean to follow sofa guideline & fix the "visible dependencies" #258
  • ConstantForceField: replace the "points" attribute by "indices" with backward compatibility & deprecation message #258

Plugins / Projects

• [SceneCreator]
  • clean with cosmetic changes and removed un-needed includes
• [SofaPython]
  • cleaning data binding #166

Moved files

• The module handling HighOrderTopologies moved into a separate repository #222

---

v16.12

Last commit: on Jan 08, 2017
Full log

Environment

• C++11 is now mandatory. This implies some changes in building tools.
  • Generator: CMake 3.1 or higher.
  • Compiler: GCC 4.8 or higher, Clang 3.4 or higher, Microsoft Visual C++ 2013 or higher.

New features for users

• new Geomagic plugin: supporting latest versions of force feedback interfaces from Geomagic
• add ForceMaskOff, a component to locally (in a branch of the scene graph) cancel the force mask
• live-coding for python
• live-coding for GLSL
• new component MakeAlias
• new component MakeDataAlias
• improved error message & console rendering

New features for developpers

• Preliminary Markdown support in the msg_* API. You can now write much better formatting & alignement as well as adding URL to documentations related to the error.
• class RichStyleConsoleFormatter which interprete the markdowns in the message and format this to a resizable console with nice alignement.
• class CountingMessageHandler (count the number of message for each message type)
• class RoutingMessageHandler (to implement context specific routing of the messages to different handler)
• class ExpectMessage and MessageAsATestFailure can be used to check that a component did or didn't send a message and generate a test failure.
• FileMonitor is now implemented on MacOS & Windows (for live-coding features, for example)
• RequiredPlugin: modified API to take a list of plugins to load
• Implements the move semantics on sofa::helper::vector

Improvements

• 372 new tests: DAGNode, MeshObj, DiagonalMass, BoxROI, ComplementaryROI, DifferenceEngine, BilateralInteractionConstraint, Quaternion, ImagePNG, etc.
• 184/480 components have an associated example
• [SofaKernel]
  • replace raw pointers with a smart ones
  • add a ComponentState attribute to BaseObject
  • BaseData::typeName is now public: useful to debug
  • implement DataTrackerEngine, a kind of DataEngine but that is not a BaseObject
  • fix SVectorstd::string. The string serialization changed
• [SofaRigid]
  • in case jetJs is called several times per step
• [SofaGeneralLoader]
  • MeshVTKLoader can now read FIELD data of legacy file. Lookup tables are ignored.
• [SofaPython]
  • binding AssembledSystem as a new class in python
  • binding VisualModel::exportOBJ
  • binding for DataFileNameVector
  • add Compliant.getImplicitAssembledSystem(node)
  • SofaNumpy: bind/share a c++ 1d array as a numpy array
  • script.Controller : handle optional arguments before createGraph
• [image]
  • raw import: add commented basic size verifications (could be performed in debug)
• [Flexible]
  • add support for shapefunction viewer
  • new feature of strain smoothing
  • improve readme file
• [Compliant]
  • simulation unit: convert gravity, dt
  • MaskMapping: every input are now mapped
  • add LinearDiagonalCompliance component
  • fix use of VLA in python mappings
  • improve readme file

Bug Fixes

• fix ConstantForceField::updateForceMask()
• fix ObjExporter memory leak
• [SofaOpenGLVisual] OglTexture: fix possible memory leaks
• [Compliant]
  • clean python

Cleanings

• clean the compilation when SOFA_NO_OPENGL flag is activated
• clean the config.h (SOFAGUI_HAVE_QWT)
• remove boost library links (includes still required). boost chrono is not required anymore.
• remove unused POINT_DATA_VECTOR_ACCESS macro
• make miniflowVR build optional (default OFF)
• [SofaKernel]
  • remove last direct opengl calls in modules
  • add deprecation message on MechanicalObject attributes
• [SofaBaseVisual] clean BaseCamera: remove direct opengl calls
• [SofaHaptics] boost-thread is not used any more, clean cmake
• [SofaGeneralLoader] STLLoader: fixing binary loading in debug and cleaning examples
• [SofaPython]
  • remove ScriptEnvironment i.e. automatic initialization of Node
  • Node::isInitialized(), not used anymore
• [Flexible]
  • clean relativeStrainMapping

Moved files

• move CImg from extlibs to image plugin extlibs

Documentation

• Add the contribution and guidelines : CONTRIBUTING.md and GUIDELINES.md
• Add the configuration required (ex: C++, compiler versions)
• Add a page to use SOFA in Matlab
• Improve Logger documentation
• Add a page to use SOFA in Matlab

---

v16.08

Last commit: on Jul 28, 2016
Full log

New features

• SOFA on GitHub - https://github.com/sofa-framework/sofa
• creation of a RigidScale plugin: implementing mappings, especially allowing to get the DOF with Rigid+Scale type, while reusing affine DOF (Rigid+Scale+Shear) already implemented in Flexible
• creation of a LeapMotion plugin: allowing to integrate a Leap in your SOFA simulation
• add the DrawTool: DrawTool is an interface, describing an API to display primitives on screen. For now, only the OpenGL (fixed-pipeline version) implementation has been made.
• add a Logger
• add the diffusion effect in SOFA (heat transfer)
• SOFA_USE_MASK compilation variable to activate or de-activate the masks in SOFA
• DataTracker: simple and elegant way to track Data in Engine
• extlibs: update cimg to version 1.7.3
• Add guidelines for contributions in CONTRIBUTING.md

Moved files

• Kernel modules of SOFA (SofaFramework, SofaBase, SofaCommon and SofaSimulation) have been moved to one common module SofaKernel, located at sofa_root/SofaKernel. SofaKernel is a pure LGPL module.

• code in sofa_root/modules/sofa/simulation/ has been splitted into three modules of SofaKernel: SofaSimulationCommon, SofaSimulationTree, SofaSimulationGraph

• MOVE the SofaPardiso module as a plugin

• Move OglTetrahedralModel into a new plugin called VolumetricRendering

• Minor moves

  • Move ColorMap code to helper and let (Ogl)ColorMap from SofaOpenGLVisual doing OpenGL stuff
  • Move TorsionForceField and ComplementaryROI into SOFA (those two components where in a deprecated repository sofa_root/modules/sofa/components/)

• [Compliant]

  • moving propagate_constraint_force_visitor in a helper file and minor cleaning of CompliantImplicitSolver

Improvements

• test examples are now running (on Jenkins for the Continuous Integration)

• Add unit test for quaternions

• Improving default mouse manipulation while picking a dof

• MouseWheel events now propagated

• Minor improvements

  • runSofa: force loading the SofaPython plugin if existing
  • runSofa: adding clang-style formatting (option '-z clang')
  • MechanicalObject: adding more visualisation colors for Rigids
  • SofaPluginManager: Clear description and components when removing last plugin
  • CMake: removing "-Wno-deprecated-register" compiler option that is only known by a few compilers
  • Collision: add function setConstraintId in BaseConstraintSet
  • SPtr: up to 10 parameters in constructor
  • Add function in EigenBaseSparseMatrix in order to use eigen matrices with async solvers
  • Add CUSPARSESolver in SofaCudaSolversPlugin, this solver uses cusparse library to solve a sparse triangular system on the GPU
  • MeshBoundaryROI: allows specifying an input subset
  • ColorMap: with face culling enabled
  • ColorMap: adding a scale for the legend range values
  • ImageViewer: adding new boolean data field displaying meshes directly on the slices
  • ProjectionToPlaneMultiMapping: adding a projection factor to perform tricky stuff such as planar symmetry
  • ProjectionToTargetPlaneMapping: adding a factor to perform planar symmetry for example
  • DataDisplay: can now be displayed in wireframe
  • DataDisplay: display used topology
  • DataDisplay: fix and improving shading a bit
  • SofaEngine: add selectLabelROI engine
  • SofaEngine: add SelectConnectedLabelsROI
  • SofaBoundaryCondition: it is now possible to hide fixedconstraint (default to shown as before)
  • Mat.h: adding tensor product between vectors
  • ForceField: adding const getMState()
  • VolumetricRendering: Initialize tetra/hexa Data<> (to be able to link them as data in scenes)
  • SofaBaseVisual: Add modelview and projection matrices as data output
  • FrameBufferObject: check (and use) the default framebuffer for the current display window
  • SofaOpenGLVisual: add link to a potential external shader for VisualManagerSecondaryPass
  • Add OglTexturePointer
  • adding SquareDistanceMapping to compute the square distance between 2 points.
  • add OrderIndependentTransparency Manager (using two passes instead of three)
  • add OglOITShader to customize the shading of transparent surfaces
  • ProjectionToTargetLineMapping and ProjectionToTargetPlaneMapping with precomputed constant Jacobians and using last origin and direction/normal for extra points
  • Adding a timer embedding all the animation loop step but would need further doc.
  • display of indices has been improved
  • Add an example using cloth springs: examples/Components/forcefield/ClothBendingForceField.py
  • Improving a few examples by making the embedding nodes as non pickable (tag 'NoPicking')
  • Add BaseNode::getRootPath
  • Improving performances: - Message::class is now an enum
  • Updated draw method of PointSetGeometryAlgorithms, QuadSetGeometryAlgorithms, TetrahedronSetGeometryAlgorithms, TriangleSetGeometryAlgorithms
  • Add Blender-like orientation helper in the bottom-left part of the screen while drawing bbox (QtGlViewer)
  • Add Blender-like orientation helper in the bottom-left part of the screen while drawing bbox (QtViewer)
  • add of GUIEvent into the STLExporter
  • Make the code compatible with ClipPlane (using ClipVertex in shaders, which is deprecated for GLSL > 1.4)
  • Optimize the callto C-PYTHON side when the functions are not implemented in the python side
  • Add color attribute support (and default color if not present in the node)
  • Reactivate color map in TetraFEM, as it does not depend on SofaOpenGLVisual anymore
  • indices data field for UniformMass
  • analyze matrix only if number of non-zeroes has changed and no iterative refinement
  • update the applyConstraint methods according to the actual API
  • Adding ProjectionTo{Plane|Line}MultiMapping where the plane (origin,normal) and the line (origin,direction) are dofs
  • add MeshBoundaryROI with an example

• [Tests]

  • for (multi)Mapping test, check the size of the mapping output is correct
  • adding TestMessageHandler that raises a gtest failure each time an error message is processed
  • test for node removal
  • test for removal of a node containing an UncoupledConstraintCorrection (for now the test fails because there is a problem with the removal of that component)
  • add of Multi2Mapping_test
  • add DistanceMapping_test

• [SofaPython]

  • logger: cleaning emitter
  • sml.Mesh: adding load function
  • sml: python set for tags is created by objects themselves
  • sml: add tag to JointGeneric
  • sml: add the printLog flag
  • sml: setup units in BaseScene for all sml Scene class
  • sml: mesh has a clear id
  • sml:insertVisual: bug fix for solid with multiple meshes (just impacting the Display scene)
  • sml: handy constructor for Dof creation
  • sml: like can be defined in
  • sml: add a utility function: look into the valueByTag dictionary for a tag contained in tags
  • sml: adding a warning if a vertex group is empty
  • sml: can have offsets under solids
  • sml: remove deprecated setTagFromTag() method
  • API: add subsetFromDeformables function
  • binding Node::isInitialized
  • binding loadPythonSceneWithArguments
  • adding a binding to get the pointer of a Data (with its dimensions and type)
  • adding binding of BaseMapping::getJs (as dense matrices for now)
  • adding python functions to convert a Data in a numpy array with shared memory
  • adding a visitor to set all mstates as non pickable (such as picking will only be performed with collision models)
  • add tags to mesh groups
  • add a groupsByTag dict to easily iterate over groups knowing a tag
  • add of SceneDataIO to save and load the current state of a simulation
  • add of the method getDataFields
  • adding automatically tested examples
  • add tags to MeshAttributes
  • add a helper PythonScriptFunction_call and PythonScriptFunction_callNoResult to call a python controller function from c++ code
  • PythonScriptHelper -> PythonScriptControllerHelper: PythonScriptHelper: add convertion for float and std::string
  • Add the timingEnabled attribute to the PythonScriptController to control if the script is gather timing statistics
  • adding python module to load .obj files
  • adding BaseContext_getObject_noWarning that returns None w/o warning if the object is not found
  • improving a bit the conversion from a cpp Base* to a PyObject* when the cpp Base* type is (even partially) known.
  • adding a test to show how to bind a component outside of SofaPython
  • Factory: conversion shortcuts for known types
  • PythonScriptController: if the filename is let empty, the controller is supposed to be in an already loaded file, to avoid to read the same file several times
  • adding "loadPlugin" function to the Sofa python module
  • Add a getObjects() method to python BaseContext interface. Allow selection of objects based on type and name.
  • object and type names are now both optional when calling BaseContext_getObjects()
  • search direction can now optionally be passed to BaseContext_getObjects()
  • at object creation failure, print additional error messages from BaseObjectDescription
  • adding special Data types in the PythonFactory, so more specific cases can be added outside of the plugin SofaPython.
  • adding Node::addObject_noWarning not to print a warning when adding an object to an already initialized node
  • add of a method which compute quaternion from a line define by a director vector
  • add of few new features to save and load the current state of simulation

• [Flexible]

  • adding FlexibleCorotationalMeshFEMForceField (meta-forcefield). Not optimized but working
  • add of RigidScale mapping in addition to their tests and examples
  • HexaFEM comparison: each method has its own solver and uses the same decomposition so the only difference came from the deformation tensor used to find the rotation.
  • Flexible: WIP adding a meta-forcefield to compute regular corotational FEM. The idea is to use Flexible's components internally without adding extra computation neither extra memory
  • API: add strain offseting option
  • API: strainMappings as data members
  • API: use branching images for mass computation
  • API: make AffineMass, ShapeFunction, Behavior work in more cases
  • API: make Behavior work in simple cases with no label image
  • materials: removed checking for changed parameters at each step.
  • add example showing how to better handle partially filled elements using fine volumes
  • optimizing FlexibleCorotationalMeshFEMForceField by preassembling constant sub-graph
  • refactoring of MassFromDensity
  • adding a warning when creating a UniformMass on Affine/Quadratic frames.
  • add FEMDof class to python API
  • DeformationMapping: print a warning if a child particle has no parent
  • adding HEML implementation of St Venant-Kirchhoff materials (for tetrahedra).
  • if correct weights are given in mapping as input data, use it (even if a shapefunction is found)
  • use sout for logging
  • compute tangents for VisualModel loaded using loadVisual python function
  • transformEngine for Affine frames

• [Compliant]

  • sml: export of meshes
  • sml: the solids tags to be simulated as rigids are gathered in a set()
  • sml: geometricStiffness option
  • sml: using logger
  • implementing compliance unassembled API
  • in the python API, joints can be created in compliance or not
  • API: write a addSpring() in GenericRigidJoint, reuse it in children classes where possible
  • API: simplify usage of jointCompliance specification by tag
  • API: relative offset position is given to the AssembledRigidRigidMapping, and then computed at init into the MO
  • API: modifying the API to move an Offset
  • API: adding Offset::moveOffset to apply a rigid transformation to an offset (in its local frame)
  • API: new parameter to add non-mechanical Offsets and MappedPoints
  • API: collision mesh and visual model can be added to a Rigid Offset
  • adding an automatic execution of a scene based on a sml description
  • Constraint: adding a typeid for faster Constraint type comparisons
  • adding short name to create a ConstantCompliantPseudoStaticSolver
  • using tag on joints in a generic way, set their compliance / isCompliance value
  • added machinery to map data to numpy arrays, see example/numpy_data.py
  • added easy pure python mappings, see examples/numpy_mapping.py
  • added pure python forcefields, see examples/numpy_forcefield.py
  • AssembledRigidRigidMapping autoresize
  • geometric stiffness in python mappings
  • insertMergeRigid is coherent with solid tags usage
  • CompliantPseudoStaticSolver: avoiding an unnecessary propagation when the stopping criterion is the nb of iterations.
  • visualization in DifferenceFromTargetMapping
  • Frame.py: adding a function to force quaternion normalization (to avoid numerical drift)
  • added SimpleAnimationLoop
  • adding RigidRestJointMapping to compute a joint between a rigid body's current position and its rest position.
  • large compliances are considered as null stiffnesses
  • Offset default to isMechanical=True
  • python quaternion log
  • added nlnscg acceleration
  • pure python constraints
  • .inl for python mappings
  • adding Addition[Multi]Mapping
  • implementing AssembledMultiMapping::applyDJT
  • adding DotProduct[Multi]Mapping (with tests)
  • adding NormalizationMapping to map a 3d vector to its normalization
  • adding ConstantAssembled[Multi]Mapping
  • adding SafeDistanceMapping: a distance mapping that becomes a difference mapping for too small distances.
  • adding SafeDistanceFromTargetMapping
  • using the new SofaPython API
  • SafeDistanceFromTargetMapping can now be "safe" by giving the edge directions when they are known
  • adding the SofaCompliant python module (first module created outside of SofaPython!)
  • adding DotProductFromTargetMapping (with test)
  • adding RigidJointFromTargetMapping and RigidJointFromWorldFrameMapping
  • add of complementary API to create deformable articulated systems
  • adding NegativeUnilateralConstraint to guarantee negativeness
  • adding PenaltyForceField and using it in penalty contact response
  • add of two file from the SohusimDev plugin

• [image]

  • API: Sampler.addMechanicalObject() more versatile
  • API: refactor python API
  • API: add addClosingVisual()
  • add function in python API to retrieve perspective property
  • MeshToImageEngine: move getValue out of for loops
  • add a python ImagePlaneController
  • Data<Image> are now specifically bound in python
  • remove pthread and X11 dependencies
  • add metaimage tags that may be used to define orientation
  • add python function to retrieve image type
  • simpler imagePlane python controller
  • add a createTransferFunction method
  • improved cutplane texture resolution
  • half perspective, half orthographic image transforms
  • add imageCoordValuesFromPositions engine

Bug Fixes

• [PluginManager] crashed when a plugin was removed

• [SofaCUDA] fix the compilation using SofaCUDA on Windows

• unstable behavior of masks - USE-MASK variable added

• fix DAGNode traversal when a visitor is run from a node with a not up-to-date descendancy

• fix flaws in glText (memory leak and an other bug)

• EigenBaseSparseMatrix: fix parallel matrix-vector product

• XML export

• Minor fix

  • Sofa helper: leak when drawing 3d text
  • compilation with SofaDumpVisitor flag enabled
  • compilation of BezierTriangleSetGeometryAlgorithms (color changed from Vec3f to Vec4f)
  • runSofa: viewport aspect issue and loss of interaction in QtGLViewer
  • BoxROI: visual bounding box
  • SofaMiscForceField on Windows
  • VisualVisitor traversal order
  • SphereROI: indices out when multiple spheres
  • bug in RestShapeSpringsForceField
  • Remove VariationalSymplecticSolver.h from the package in SofaCommon (to fix history)
  • some static analysis warnings and errors (including memory leaks)
  • MeshROI: remove unnecessary sqrt
  • SphereROI: set centers' size to radii if only one radius is provided
  • ARTrack plugin compilation
  • bug in MeshNewProximityIntersection involving false positive detection with triangles containing an angle > 90°
  • path to images for html description pop up window
  • OglModel hasTexture
  • DataDisplay: normal computation
  • DataDisplay: crash when the component was dynamically added to a scene
  • visual bug with OglModel when putOnlyTexCoords is enabled with no texture
  • Order Independent Transparency for old graphics card
  • sofa::gui::glut applying changes in BaseCamera
  • computation of the bounding box in PlaneForceField
  • SofaHelper: Fix bug with FBO (causing some weird things when using textures)
  • corrected the visualization of heterogeneous tetrahedra
  • SofaOpenGLVisual: Fix Spotlight source drawing + add some log for ShaderElement
  • OmniDriverEmu plugin and examples
  • scene test: ICPRegistration_ShapeMatching.scn is ignored
  • Vec: 'normalized' function constness
  • SpotLight: direction normalization
  • ProjectionTo{Plane,Line}MultiMapping Jacobian insertion order
  • SofaGeneralRigid: bug in ArticulatedSystemMapping
  • SofaEngine: BoxROI instantiation
  • SofaBaseCollision: Fix computeBBox in SPhereModel
  • bug in MechanicalPickParticlesWithTagsVisitor input tags were not respected
  • SofaOpenGLVisual: fix light's modelview matrix computation (lookat data was not checked)
  • StateMask method clean needs to resize m_size to 0

• [Test-CI]

  • fix crash UncoupledConstraintCorrection_test
  • fix SofaComponentBase_test on windows
  • fix Mapping and MultiMapping tests
  • fix MultiMapping::applyDJT test
  • fix {Difference,Addition}Mapping when a pair is composed of the same index.
  • fix tested scenes selection
  • removed OptiTrackNatNet from "options" configurations
  • ignore some OptiTrackNatNet scenes testing

• [SofaPython]

  • fix GridTopology type on the python side
  • fix OBJ loader
  • fix loading a scene from a .py in a Node independently from the awful Simulation singleton.
  • fix SofaPython.Tools.localPath in some situations
  • fix BaseContext_getObjects so it can select objects from a base class name (and adding an example)
  • quaternion: fix singularity in from_line function

• [Flexible]

  • fix case sensitive issues
  • API: fix a bug with colors when reloading a scene
  • fix the bulk factor in NeoHookean material
  • fix NeoHookean traction test
  • testing detachFromGraph
  • BaseDeformationMapping: remove debug message, fix usage of sout (no need for testing f_printLog)
  • fix test compilation w/o image plugin
  • fix loadVisual
  • fix bug in topologygausspointsampler (computation of volume integrals for irregular hexa)

• [Compliant]

  • CompliantImplicitSolver: fix Lagrange multipliers clear when reseting the simulation
  • auto-fix init errors in RigidMass
  • Frame.py: adding tolist() conversion
  • fix Jacobian reserved size
  • fix contacts and associated test

• [image]

  • python tools: fix bug in mhd parsing
  • MeshToImage: fix bresenham, be sure dmax>=1
  • fix resampling of projection images, and marching cubes default parameter
  • fix bug in mhd file loader
  • fix rasterization when using vertex colors

Cleanings

• warnings were removed

• dead branches were removed

• the ‘using’ directives were removed in header files

• the repository sofa_root/modules/sofa/components has been cleaned (deprecated components removed)

• clean many SOFA examples

• removing "using helper::vector" from VecTypes.h

• SofaQtGui: Remove qt3 remnants in ui files

• Minor clean

  • clean SofaBaseCollision of OpenGL dependency
  • cleaning Material::setColor
  • Base: write sout as info (rather than warnings)
  • clean and fix RestShapeSpringsForceField draw functions
  • Remove useless tests, optimize and fix potential bugs
  • cleanup, precompute barycenters for tetra and hexa
  • SofaBaseVisual: clean up and make consistent BaseCamera's code: clean QtViewer projection (remove OpenGL functions)
  • SofaBaseVisual: clean and fix BaseCamera Z clipping
  • SofaOpenGLVisual: cleanup Lights (remove Glu calls and set matrices as data) + Fix typo in Camera
  • quaternion to euler: not need for the hack since atan2 is used

• [SofaPython]

  • clean examples
  • clean the hard-binding example
  • clean noPicking visitor

• [Flexible]

  • remove unecessary data for Gauss points visualization
  • some clean regarding openmp parallelisation
  • clean metaFF
  • remove unecessary apply in reinit
  • clean FlexibleCorotationalMeshFEMForceField

• [Compliant]

  • clean RigidJoint{Multi}Mapping

---

v15.12

Full log

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v15.09

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