run_test

#!/bin/bash
##########################################
#
#		University of Southampton, 9 March 2016
#
#		James Matthews
#
#		run_test
#
# run_test is a shell script which compiles python then runs a load 
# standard parameter files.
#
# Usage: ./run_test [version] [mode]"
#  version: version of Python to run
#  mode: 0, small test, 1, medium with fiducial agn, 2, large parallel test w/ matoms 3
#  or: -h : print this message
#
# Environment variables needed are
# PYTHON : normal git repo
##########################################

display_help() { 
	echo "run_test is a shell script which compiles PYTHON then runs a load of standard parameter files."
	echo ""
	echo "Usage: ./run_test [version] [mode]"
	echo ""
	echo "version: version of Python to run"
	echo "mode: 0, small test, 1, large parallel test"
	echo "-h : print this message"
	echo "" 
	exit 
	} 


VERSION=""
MODE=1


if [ $# -lt 1 ]; then 
    display_help
elif [ $# -lt 2 ]; then 
    if [[ $1 == "-h" ]]; then
    	display_help
    fi
else
    echo "Reading version and mode from cmd line..."
    VERSION=$1
    MODE=$2    
fi

# make a folder to store my outputs in
DATE=$(date +%F)
FOLDER="test_"$VERSION"_"$DATE
echo $FOLDER
mkdir $FOLDER
cd $FOLDER



# First make sure the error and output files are empty.
: > run_test_out.txt
: > run_test_err.txt

date > run_test_out.txt
date > run_test_err.txt

cp $PYTHON/examples/core/*.pf .

Setup_Py_Dir


# run the ion loop
# python $PYTEST/scripts/ion_loop_jm.py $VERSION $VERSION standard78 &

# if we are in mode 2 or 3 then we should really be running multicore
if [[ $MODE == 2 ]]; then
    read -p "How many cores should I run fiducial_agn and loop on?" ncores
    echo "Running 2 jobs on "$ncores" cores each"
    nice mpirun -n $ncores $PYTHON/bin/py$VERSION fiducial_agn > fiducial_agn.out &
    python ../run_ion_loop.py ../AGN_vIP.param $VERSION $ncores &
elif [[ $MODE == 3 ]]; then
    read -p "How many cores should I run the longer models on?" ncores
    echo "Running 4 jobs on "$ncores" cores each"
    nice mpirun -n $ncores $PYTHON/bin/py$VERSION fiducial_agn > fiducial_agn.out &
    nice mpirun -n $ncores $PYTHON/bin/py$VERSION cv_macro_benchmark > cv_macro_benchmark.out &
    nice mpirun -n $ncores $PYTHON/bin/py$VERSION m16_agn > m16_agn.out &
    python ../run_ion_loop.py ../AGN_vIP.param $VERSION $ncores 
fi

# if we're in mode 1 then we are just running quick models
# these are all runnable on 1 core in a reasonable time and run in all modes
py$VERSION cv_standard > cv_standard.out &
py$VERSION 1d_sn > 1d_sn.out &
py$VERSION star > star.out &