diff --git a/project/ana_cov_comp/README_perlmutter.md b/project/ana_cov_comp/README_perlmutter.md index 9518ad5e..5c1f4c7d 100644 --- a/project/ana_cov_comp/README_perlmutter.md +++ b/project/ana_cov_comp/README_perlmutter.md @@ -10,7 +10,9 @@ python python/get_2pt_ewin_alms.py paramfiles/cov_dr6_v4_20231128.dict" ## Couplings: ```bash -sbatch paramfiles/2pt_coupling_matrices.slurm +alias shortjob="sbatch --time 2:00:00 paramfiles/1perlmutternode.slurm $1" # short QOS +shortjob "srun --ntasks 1 --cpus-per-task 128 --cpu-bind=cores python -u \ +python python/get_2pt_coupling_matrices.py paramfiles/cov_dr6_v4_20231128.dict" ``` ```bash diff --git a/project/ana_cov_comp/paramfiles/2pt_coupling_matrices.slurm b/project/ana_cov_comp/paramfiles/2pt_coupling_matrices.slurm deleted file mode 100644 index e27e2515..00000000 --- a/project/ana_cov_comp/paramfiles/2pt_coupling_matrices.slurm +++ /dev/null @@ -1,19 +0,0 @@ -#! /bin/bash -#SBATCH -A mp107 -#SBATCH -C cpu -#SBATCH -n 1 # node count -#SBATCH -c 128 -#SBATCH -q regular -#SBATCH -t 2:00:00 -#SBATCH --output=slurmoutput/R-%j.out - -cd /pscratch/sd/x/xzackli/so/PSpipe_ana_cov_comp/project/ana_cov_comp -base_dir=/pscratch/sd/x/xzackli/so/envs/ps -pyenv_dir=${base_dir}/pyenv/perlmutter -export SOFIND_SYSTEM=perlmutter -export PYTHONPATH=$PYTHONPATH:${software_dir} -source ${pyenv_dir}/bin/activate - -export OMP_NUM_THREADS=128 - -python python/get_2pt_coupling_matrices.py paramfiles/cov_dr6_v4_20231128.dict