From 538c2ee23e48e6d10d82ee064bb85349f8cfbeac Mon Sep 17 00:00:00 2001 From: Sigve Nakken Date: Mon, 21 Oct 2024 12:03:34 +0200 Subject: [PATCH] =?UTF-8?q?Bump=20version:=202.1.1=20=E2=86=92=202.1.2?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- .bumpversion.cfg | 2 +- .github/workflows/build_conda_recipes.yaml | 2 +- conda/env/yml/pcgr.yml | 2 +- conda/env/yml/pcgrr.yml | 2 +- conda/env/yml/pkgdown.yml | 2 +- conda/recipe/pcgr/meta.yaml | 2 +- conda/recipe/pcgrr/meta.yaml | 2 +- pcgr/_version.py | 2 +- pcgrr/DESCRIPTION | 2 +- pcgrr/vignettes/installation.Rmd | 2 +- pyproject.toml | 2 +- 11 files changed, 11 insertions(+), 11 deletions(-) diff --git a/.bumpversion.cfg b/.bumpversion.cfg index 8851d02e..a6426492 100644 --- a/.bumpversion.cfg +++ b/.bumpversion.cfg @@ -1,5 +1,5 @@ [bumpversion] -current_version = 2.1.1 +current_version = 2.1.2 commit = True tag = False parse = (?P\d+)\.(?P\d+)\.(?P\d+)(\.(?P\d+))? diff --git a/.github/workflows/build_conda_recipes.yaml b/.github/workflows/build_conda_recipes.yaml index b5bfee52..8cd1051e 100644 --- a/.github/workflows/build_conda_recipes.yaml +++ b/.github/workflows/build_conda_recipes.yaml @@ -10,7 +10,7 @@ env: recipe_path: conda/recipe env_yml_path: conda/env/yml env_lock_path: conda/env/lock - VERSION: '2.1.1' # versioned by bump2version + VERSION: '2.1.2' # versioned by bump2version jobs: build_pcgrr_conda_pkg: # When merging to one of the branches above and the commit message matches diff --git a/conda/env/yml/pcgr.yml b/conda/env/yml/pcgr.yml index 319c5af0..918641eb 100644 --- a/conda/env/yml/pcgr.yml +++ b/conda/env/yml/pcgr.yml @@ -6,7 +6,7 @@ channels: - conda-forge dependencies: - - pcgr::pcgr ==2.1.1 # versioned by bump2version + - pcgr::pcgr ==2.1.2 # versioned by bump2version - bedtools - bcftools - cyvcf2 diff --git a/conda/env/yml/pcgrr.yml b/conda/env/yml/pcgrr.yml index 9a4abdb8..7f6bae23 100644 --- a/conda/env/yml/pcgrr.yml +++ b/conda/env/yml/pcgrr.yml @@ -7,7 +7,7 @@ channels: dependencies: - python - - pcgr::r-pcgrr ==2.1.1 # versioned by bump2version + - pcgr::r-pcgrr ==2.1.2 # versioned by bump2version - pcgr::r-cpsr - r-argparse - bioconductor-bsgenome.hsapiens.ucsc.hg38 diff --git a/conda/env/yml/pkgdown.yml b/conda/env/yml/pkgdown.yml index e204647c..b146aac6 100644 --- a/conda/env/yml/pkgdown.yml +++ b/conda/env/yml/pkgdown.yml @@ -4,7 +4,7 @@ channels: - bioconda - conda-forge dependencies: - - pcgr::r-pcgrr ==2.1.1 # versioned by bump2version + - pcgr::r-pcgrr ==2.1.2 # versioned by bump2version - r-pkgdown - r-readr - r-glue diff --git a/conda/recipe/pcgr/meta.yaml b/conda/recipe/pcgr/meta.yaml index e5d3fda5..5aecfa75 100644 --- a/conda/recipe/pcgr/meta.yaml +++ b/conda/recipe/pcgr/meta.yaml @@ -1,6 +1,6 @@ package: name: pcgr - version: 2.1.1 # versioned by bump2version + version: 2.1.2 # versioned by bump2version source: path: ../../.. diff --git a/conda/recipe/pcgrr/meta.yaml b/conda/recipe/pcgrr/meta.yaml index d281a484..5152824b 100644 --- a/conda/recipe/pcgrr/meta.yaml +++ b/conda/recipe/pcgrr/meta.yaml @@ -1,6 +1,6 @@ package: name: r-pcgrr - version: 2.1.1 # versioned by bump2version + version: 2.1.2 # versioned by bump2version source: path: ../../../pcgrr diff --git a/pcgr/_version.py b/pcgr/_version.py index aa9ca0cb..666b7383 100644 --- a/pcgr/_version.py +++ b/pcgr/_version.py @@ -1,2 +1,2 @@ # versioned by bump2version -__version__ = '2.1.1' +__version__ = '2.1.2' diff --git a/pcgrr/DESCRIPTION b/pcgrr/DESCRIPTION index 17f2b858..d65c9d8c 100644 --- a/pcgrr/DESCRIPTION +++ b/pcgrr/DESCRIPTION @@ -1,7 +1,7 @@ Package: pcgrr Type: Package Title: Personal Cancer Genome ReporteR -Version: 2.1.1 +Version: 2.1.2 Authors@R: c(person(given = "Sigve", family = "Nakken", diff --git a/pcgrr/vignettes/installation.Rmd b/pcgrr/vignettes/installation.Rmd index 2ec06ed5..50b67de1 100644 --- a/pcgrr/vignettes/installation.Rmd +++ b/pcgrr/vignettes/installation.Rmd @@ -15,7 +15,7 @@ require(glue, include.only = "glue") ```{r vars, echo=FALSE} Sys.setenv(VEP_VERSION = "112") -Sys.setenv(PCGR_VERSION = "2.1.1") +Sys.setenv(PCGR_VERSION = "2.1.2") Sys.setenv(BUNDLE_VERSION = "20240927") VEP_VERSION <- Sys.getenv("VEP_VERSION") PCGR_VERSION <- Sys.getenv("PCGR_VERSION") diff --git a/pyproject.toml b/pyproject.toml index 120d4fd5..195fb709 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -5,7 +5,7 @@ build-backend = "setuptools.build_meta" [project] name = "pcgr" -version = "2.1.1" # versioned by bump2version +version = "2.1.2" # versioned by bump2version description = "Personal Cancer Genome Reporter (PCGR) - variant interpretation for precision cancer medicine" authors = [ {name = "Sigve Nakken", email = "sigven@gmail.com"},