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Example notebooks for the scivision project

This repo contains the following example notebooks, which can be run by clicking the binder links or locally with Jupyter notebook:

  1. How to use scivision: a notebook demonstrating essential scivision functionality, with image classification models. This can be run on Binder: badge
  2. Object detection with scivision
  3. [WIP] Image segmentation with scivision
  4. [WIP] Data plugin example (stac.py)

To run the notebooks in this repo locally, do the following:

  1. Open your terminal
  2. Check your conda installation with conda --version. If you don't have conda, install it by following these instructions
  3. Clone the repository into your current folder git clone https://github.com/scivision-gallery/scivision-basic-usage-examples
  4. Change directory to the cloned repository, cd scivision-basic-usage-examples.
  5. Create an environment, scivision, for the notebooks: conda env create -f environment.yml
  6. Activate it: conda activate scivision
  7. Open the notebooks in this repo with jupyter notebook

A full conda environment can be found in environment_full.yml if you are having issues creating the conda environment. This contains details of all the packages and their versions which are required to run these notebooks, including secondary and tertiary dependencies.

Visit the Scivision Gallery to see more examples and use-cases.