From 6b380f7a9c594b71a4ee713b510ee38b2e40677b Mon Sep 17 00:00:00 2001 From: Thoumyre Stanislas Date: Thu, 12 Dec 2024 18:47:54 +0000 Subject: [PATCH] remplace container gibbs --- modules/nf-neuro/preproc/gibbs/main.nf | 4 +--- 1 file changed, 1 insertion(+), 3 deletions(-) diff --git a/modules/nf-neuro/preproc/gibbs/main.nf b/modules/nf-neuro/preproc/gibbs/main.nf index 16b3d7b6..1744e5d9 100644 --- a/modules/nf-neuro/preproc/gibbs/main.nf +++ b/modules/nf-neuro/preproc/gibbs/main.nf @@ -2,9 +2,7 @@ process PREPROC_GIBBS { tag "$meta.id" label 'process_single' - container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? - 'https://scil.usherbrooke.ca/containers/scilus_2.0.2.sif': - 'scilus/scilus:2.0.2' }" + container "mrtrix3/mrtrix3:latest" input: tuple val(meta), path(dwi)