From 384d444c001f9cfb23432cb03d94fa03cdc2c24a Mon Sep 17 00:00:00 2001 From: medde Date: Thu, 12 Dec 2024 14:50:38 +0000 Subject: [PATCH] fix mrtrix container --- modules/nf-neuro/image/applymask/main.nf | 4 +--- 1 file changed, 1 insertion(+), 3 deletions(-) diff --git a/modules/nf-neuro/image/applymask/main.nf b/modules/nf-neuro/image/applymask/main.nf index 9332cad2..f7dc660d 100644 --- a/modules/nf-neuro/image/applymask/main.nf +++ b/modules/nf-neuro/image/applymask/main.nf @@ -2,9 +2,7 @@ process IMAGE_APPLYMASK { tag "$meta.id" label 'process_single' - container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? - 'https://scil.usherbrooke.ca/containers/scilus_2.0.2.sif': - 'scilus/scilus:2.0.2' }" + container "mrtrix3/mrtrix3:latest" input: tuple val(meta), path(image), path(mask)