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phasing.rst

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_static/protein_rsz.png

Phasing

Input/Output data description

The input/output data is expected in hdf5 format, and the glossary can be found below. Phasing module is responsible for reading in and writing out in the format specified below.

phase_out_<7 digit ID>.h5 (Output HDF glossary)

Field name Description Data type Units
data/      
data/electronDensity Recovered electron density volume in 3D array (dimX x dimY x dimZ) Float  
params/      
params/info Input for phasing program and version String  
history/ Information about input data    
info/ Information    
misc/ Miscellaneous information    
version hdf5 format version Float 0.1