diff --git a/poetry.lock b/poetry.lock
index 458a5f5..982388c 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -1,115 +1,5 @@
 # This file is automatically @generated by Poetry 1.6.1 and should not be changed by hand.
 
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-description = "Async http client/server framework (asyncio)"
-optional = true
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-
-[package.dependencies]
-aiosignal = ">=1.1.2"
-async-timeout = {version = ">=4.0,<5.0", markers = "python_version < \"3.11\""}
-attrs = ">=17.3.0"
-frozenlist = ">=1.1.1"
-multidict = ">=4.5,<7.0"
-yarl = ">=1.0,<2.0"
-
-[package.extras]
-speedups = ["Brotli", "aiodns", "brotlicffi"]
-
-[[package]]
-name = "aiosignal"
-version = "1.3.1"
-description = "aiosignal: a list of registered asynchronous callbacks"
-optional = true
-python-versions = ">=3.7"
-files = [
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-]
-
-[package.dependencies]
-frozenlist = ">=1.1.0"
-
 [[package]]
 name = "alabaster"
 version = "0.7.13"
@@ -156,27 +46,6 @@ files = [
     {file = "appnope-0.1.4.tar.gz", hash = "sha256:1de3860566df9caf38f01f86f65e0e13e379af54f9e4bee1e66b48f2efffd1ee"},
 ]
 
-[[package]]
-name = "asciitree"
-version = "0.3.3"
-description = "Draws ASCII trees."
-optional = true
-python-versions = "*"
-files = [
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-
-[[package]]
-name = "async-timeout"
-version = "4.0.3"
-description = "Timeout context manager for asyncio programs"
-optional = true
-python-versions = ">=3.7"
-files = [
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-
 [[package]]
 name = "attrs"
 version = "23.2.0"
@@ -347,13 +216,13 @@ xlrd = ">=1.1"
 
 [[package]]
 name = "certifi"
-version = "2024.2.2"
+version = "2024.6.2"
 description = "Python package for providing Mozilla's CA Bundle."
 optional = false
 python-versions = ">=3.6"
 files = [
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 ]
 
 [[package]]
@@ -532,50 +401,25 @@ files = [
 
 [[package]]
 name = "clarabel"
-version = "0.8.1"
+version = "0.9.0"
 description = "Clarabel Conic Interior Point Solver for Rust / Python"
 optional = true
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 scipy = "*"
 
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-gdal = ["gdal"]
-itk = ["itk"]
-linting = ["black", "flake8"]
-pillow-heif = ["pillow-heif"]
-pyav = ["av"]
-test = ["fsspec[github]", "pytest", "pytest-cov"]
-tifffile = ["tifffile"]
-
 [[package]]
 name = "imagesize"
 version = "1.4.1"
@@ -1784,13 +1353,13 @@ referencing = ">=0.31.0"
 
 [[package]]
 name = "jupyter-client"
-version = "8.6.1"
+version = "8.6.2"
 description = "Jupyter protocol implementation and client libraries"
 optional = false
 python-versions = ">=3.8"
 files = [
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 [package.dependencies]
@@ -1803,7 +1372,7 @@ traitlets = ">=5.3"
 
 [package.extras]
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+test = ["coverage", "ipykernel (>=6.14)", "mypy", "paramiko", "pre-commit", "pytest (<8.2.0)", "pytest-cov", "pytest-jupyter[client] (>=0.4.1)", "pytest-timeout"]
 
 [[package]]
 name = "jupyter-core"
@@ -1968,71 +1537,6 @@ scipy = ">=1.0.0"
 plot = ["matplotlib (>=2.2.5)"]
 testing = ["matplotlib (>=2.2.5)", "pytest (>=5.0.1)", "pytest-cov (>=3.0.0)"]
 
-[[package]]
-name = "lazy-loader"
-version = "0.4"
-description = "Makes it easy to load subpackages and functions on demand."
-optional = true
-python-versions = ">=3.7"
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-[package.dependencies]
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-
-[package.extras]
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-lint = ["pre-commit (==3.7.0)"]
-test = ["pytest (>=7.4)", "pytest-cov (>=4.1)"]
-
-[[package]]
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-]
-
-[package.dependencies]
-igraph = ">=0.10.0,<0.12"
-
 [[package]]
 name = "llvmlite"
 version = "0.41.1"
@@ -2066,17 +1570,6 @@ files = [
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 ]
 
-[[package]]
-name = "locket"
-version = "1.0.0"
-description = "File-based locks for Python on Linux and Windows"
-optional = true
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
-files = [
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-]
-
 [[package]]
 name = "markupsafe"
 version = "2.1.5"
@@ -2228,20 +1721,6 @@ files = [
 [package.dependencies]
 traitlets = "*"
 
-[[package]]
-name = "matplotlib-scalebar"
-version = "0.8.1"
-description = "Artist for matplotlib to display a scale bar"
-optional = true
-python-versions = "~=3.7"
-files = [
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-]
-
-[package.dependencies]
-matplotlib = "*"
-
 [[package]]
 name = "mccabe"
 version = "0.7.0"
@@ -2330,13 +1809,13 @@ seaborn = ">=0.9.0"
 
 [[package]]
 name = "more-itertools"
-version = "10.2.0"
+version = "10.3.0"
 description = "More routines for operating on iterables, beyond itertools"
 optional = true
 python-versions = ">=3.8"
 files = [
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 ]
 
 [[package]]
@@ -2360,105 +1839,6 @@ pandas = "*"
 docs = ["nbsphinx", "pydata-sphinx-theme (==0.8.1)", "readthedocs-sphinx-search", "sphinx (>=4.0)", "sphinx-book-theme (==0.3.3)", "sphinx_automodapi"]
 test = ["zarr"]
 
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-version = "6.0.5"
-description = "multidict implementation"
-optional = true
-python-versions = ">=3.7"
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-
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 name = "numpy"
 version = "1.24.4"
@@ -2809,13 +2146,13 @@ tests = ["tox (>=3.20.1)"]
 
 [[package]]
 name = "openpyxl"
-version = "3.1.2"
+version = "3.1.3"
 description = "A Python library to read/write Excel 2010 xlsx/xlsm files"
 optional = true
 python-versions = ">=3.6"
 files = [
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 ]
 
 [package.dependencies]
@@ -2823,56 +2160,61 @@ et-xmlfile = "*"
 
 [[package]]
 name = "osqp"
-version = "0.6.5"
+version = "0.6.7"
 description = "OSQP: The Operator Splitting QP Solver"
 optional = true
 python-versions = "*"
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 ]
 
 [package.dependencies]
 numpy = ">=1.7"
 qdldl = "*"
-scipy = ">=0.13.2,<1.12.0"
+scipy = ">=0.13.2,<1.12.0 || >1.12.0"
 
 [[package]]
 name = "packaging"
-version = "24.0"
+version = "24.1"
 description = "Core utilities for Python packages"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
 files = [
-    {file = "packaging-24.0-py3-none-any.whl", hash = "sha256:2ddfb553fdf02fb784c234c7ba6ccc288296ceabec964ad2eae3777778130bc5"},
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+    {file = "packaging-24.1.tar.gz", hash = "sha256:026ed72c8ed3fcce5bf8950572258698927fd1dbda10a5e981cdf0ac37f4f002"},
 ]
 
 [[package]]
@@ -2983,24 +2325,6 @@ files = [
 qa = ["flake8 (==5.0.4)", "mypy (==0.971)", "types-setuptools (==67.2.0.1)"]
 testing = ["docopt", "pytest"]
 
-[[package]]
-name = "partd"
-version = "1.4.1"
-description = "Appendable key-value storage"
-optional = true
-python-versions = ">=3.7"
-files = [
-    {file = "partd-1.4.1-py3-none-any.whl", hash = "sha256:27e766663d36c161e2827aa3e28541c992f0b9527d3cca047e13fb3acdb989e6"},
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-]
-
-[package.dependencies]
-locket = "*"
-toolz = "*"
-
-[package.extras]
-complete = ["blosc", "numpy (>=1.9.0)", "pandas (>=0.19.0)", "pyzmq"]
-
 [[package]]
 name = "patsy"
 version = "0.5.6"
@@ -3130,21 +2454,6 @@ tests = ["check-manifest", "coverage", "defusedxml", "markdown2", "olefile", "pa
 typing = ["typing-extensions"]
 xmp = ["defusedxml"]
 
-[[package]]
-name = "pims"
-version = "0.6.1"
-description = "Python Image Sequence"
-optional = true
-python-versions = ">=3.7"
-files = [
-    {file = "PIMS-0.6.1.tar.gz", hash = "sha256:e2b704461d4ea9bce8b6a22ca35836fe67d6d34537736b405341ae5547194f3b"},
-]
-
-[package.dependencies]
-imageio = "*"
-numpy = ">=1.19"
-slicerator = ">=0.9.8"
-
 [[package]]
 name = "pkgutil-resolve-name"
 version = "1.3.10"
@@ -3267,13 +2576,13 @@ virtualenv = ">=20.10.0"
 
 [[package]]
 name = "prompt-toolkit"
-version = "3.0.43"
+version = "3.0.47"
 description = "Library for building powerful interactive command lines in Python"
 optional = false
 python-versions = ">=3.7.0"
 files = [
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 ]
 
 [package.dependencies]
@@ -3281,22 +2590,22 @@ wcwidth = "*"
 
 [[package]]
 name = "protobuf"
-version = "5.26.1"
+version = "5.27.1"
 description = ""
 optional = true
 python-versions = ">=3.8"
 files = [
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@@ -3766,13 +3038,13 @@ rpds-py = ">=0.7.0"
 
 [[package]]
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 [package.dependencies]
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 [[package]]
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@@ -4080,31 +3302,34 @@ test = ["asv", "gmpy2", "mpmath", "pooch", "pytest", "pytest-cov", "pytest-timeo
 
 [[package]]
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 ]
 
 [package.dependencies]
@@ -4171,17 +3396,6 @@ files = [
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-[[package]]
-name = "slicerator"
-version = "1.1.0"
-description = "A lazy-loading, fancy-sliceable iterable."
-optional = true
-python-versions = "*"
-files = [
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-
 [[package]]
 name = "snowballstemmer"
 version = "2.2.0"
@@ -4345,49 +3559,6 @@ files = [
 lint = ["docutils-stubs", "flake8", "mypy"]
 test = ["pytest"]
 
-[[package]]
-name = "squidpy"
-version = "1.2.2"
-description = "Squidpy - Spatial Single Cell Analysis in Python"
-optional = true
-python-versions = "*"
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-dask-image = ">=0.5.0"
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-omnipath = ">=1.0.5"
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-Pillow = ">=8.0.0"
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-typing-extensions = "*"
-validators = ">=0.18.2"
-xarray = ">=0.16.1"
-zarr = ">=2.6.1"
-
-[package.extras]
-dev = ["pre-commit (>=2.9.0)", "towncrier (>=21.3.0)"]
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-test = ["tox (>=3.20.1)"]
-
 [[package]]
 name = "statannotations"
 version = "0.4.4"
@@ -4492,17 +3663,6 @@ files = [
 numpy = "*"
 scipy = "*"
 
-[[package]]
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-description = "module to create simple ASCII tables"
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-
 [[package]]
 name = "threadpoolctl"
 version = "3.5.0"
@@ -4514,23 +3674,6 @@ files = [
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-description = "Read and write TIFF files"
-optional = true
-python-versions = ">=3.8"
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-
-[package.dependencies]
-numpy = "*"
-
-[package.extras]
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-
 [[package]]
 name = "tinycss2"
 version = "1.3.0"
@@ -4560,35 +3703,24 @@ files = [
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-optional = true
-python-versions = ">=3.7"
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-
 [[package]]
 name = "tornado"
-version = "6.4"
+version = "6.4.1"
 description = "Tornado is a Python web framework and asynchronous networking library, originally developed at FriendFeed."
 optional = false
-python-versions = ">= 3.8"
+python-versions = ">=3.8"
 files = [
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 ]
 
 [[package]]
@@ -4628,32 +3760,32 @@ test = ["argcomplete (>=3.0.3)", "mypy (>=1.7.0)", "pre-commit", "pytest (>=7.0,
 
 [[package]]
 name = "typeguard"
-version = "4.2.1"
+version = "4.3.0"
 description = "Run-time type checker for Python"
 optional = true
 python-versions = ">=3.8"
 files = [
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 ]
 
 [package.dependencies]
 importlib-metadata = {version = ">=3.6", markers = "python_version < \"3.10\""}
-typing-extensions = {version = ">=4.10.0", markers = "python_version < \"3.13\""}
+typing-extensions = ">=4.10.0"
 
 [package.extras]
-doc = ["Sphinx (>=7)", "packaging", "sphinx-autodoc-typehints (>=1.2.0)"]
+doc = ["Sphinx (>=7)", "packaging", "sphinx-autodoc-typehints (>=1.2.0)", "sphinx-rtd-theme (>=1.3.0)"]
 test = ["coverage[toml] (>=7)", "mypy (>=1.2.0)", "pytest (>=7)"]
 
 [[package]]
 name = "typing-extensions"
-version = "4.11.0"
+version = "4.12.2"
 description = "Backported and Experimental Type Hints for Python 3.8+"
 optional = true
 python-versions = ">=3.8"
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 socks = ["pysocks (>=1.5.6,!=1.5.7,<2.0)"]
 zstd = ["zstandard (>=0.18.0)"]
 
-[[package]]
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-
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-
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-packaging = ">=21.3"
-pandas = ">=1.3"
-
-[package.extras]
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-parallel = ["dask[complete]"]
-viz = ["matplotlib", "nc-time-axis", "seaborn"]
-
 [[package]]
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 version = "2.0.1"
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 docs = ["sphinx"]
 test = ["pytest", "pytest-cov"]
 
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-    {file = "yarl-1.9.4-py3-none-any.whl", hash = "sha256:928cecb0ef9d5a7946eb6ff58417ad2fe9375762382f1bf5c55e61645f2c43ad"},
-    {file = "yarl-1.9.4.tar.gz", hash = "sha256:566db86717cf8080b99b58b083b773a908ae40f06681e87e589a976faf8246bf"},
-]
-
-[package.dependencies]
-idna = ">=2.0"
-multidict = ">=4.0"
-
-[[package]]
-name = "zarr"
-version = "2.16.1"
-description = "An implementation of chunked, compressed, N-dimensional arrays for Python"
-optional = true
-python-versions = ">=3.8"
-files = [
-    {file = "zarr-2.16.1-py3-none-any.whl", hash = "sha256:de4882433ccb5b42cc1ec9872b95e64ca3a13581424666b28ed265ad76c7056f"},
-    {file = "zarr-2.16.1.tar.gz", hash = "sha256:4276cf4b4a653431042cd53ff2282bc4d292a6842411e88529964504fb073286"},
-]
-
-[package.dependencies]
-asciitree = "*"
-fasteners = "*"
-numcodecs = ">=0.10.0"
-numpy = ">=1.20,<1.21.0 || >1.21.0"
-
-[package.extras]
-docs = ["numcodecs[msgpack]", "numpydoc", "pydata-sphinx-theme", "sphinx", "sphinx-copybutton", "sphinx-design", "sphinx-issues", "sphinx-rtd-theme"]
-jupyter = ["ipytree (>=0.2.2)", "ipywidgets (>=8.0.0)", "notebook"]
-
 [[package]]
 name = "zipp"
-version = "3.18.2"
+version = "3.19.2"
 description = "Backport of pathlib-compatible object wrapper for zip files"
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "zipp-3.18.2-py3-none-any.whl", hash = "sha256:dce197b859eb796242b0622af1b8beb0a722d52aa2f57133ead08edd5bf5374e"},
-    {file = "zipp-3.18.2.tar.gz", hash = "sha256:6278d9ddbcfb1f1089a88fde84481528b07b0e10474e09dcfe53dad4069fa059"},
+    {file = "zipp-3.19.2-py3-none-any.whl", hash = "sha256:f091755f667055f2d02b32c53771a7a6c8b47e1fdbc4b72a8b9072b3eef8015c"},
+    {file = "zipp-3.19.2.tar.gz", hash = "sha256:bf1dcf6450f873a13e952a29504887c89e6de7506209e5b1bcc3460135d4de19"},
 ]
 
 [package.extras]
-docs = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"]
-testing = ["big-O", "jaraco.functools", "jaraco.itertools", "jaraco.test", "more-itertools", "pytest (>=6,!=8.1.*)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-ignore-flaky", "pytest-mypy", "pytest-ruff (>=0.2.1)"]
+doc = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"]
+test = ["big-O", "importlib-resources", "jaraco.functools", "jaraco.itertools", "jaraco.test", "more-itertools", "pytest (>=6,!=8.1.*)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-ignore-flaky", "pytest-mypy", "pytest-ruff (>=0.2.1)"]
 
 [extras]
 common = ["decoupler", "omnipath", "requests"]
-full = ["cell2cell", "corneto", "cvxpy", "cylp", "decoupler", "mofapy2", "mofax", "muon", "omnipath", "pydeseq2", "requests", "squidpy"]
+full = ["cell2cell", "corneto", "cvxpy", "cylp", "decoupler", "mofapy2", "mofax", "muon", "omnipath", "pydeseq2", "requests"]
 
 [metadata]
 lock-version = "2.0"
 python-versions = ">=3.8 <3.12"
-content-hash = "aab890483e997aef796e1703b7c9f9fe8278121370a26704c855f2dc0c4bbb2d"
+content-hash = "be04b619cec2eff2361fb0caf5edaa252a65b2f17db8f173f13d1dd5fd0e7fd1"
diff --git a/pyproject.toml b/pyproject.toml
index 37e3d3b..32209b8 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -30,7 +30,6 @@ tqdm = "^4.0"
 omnipath = {version = ">=1.0.6", optional = true}
 decoupler = {version = ">=1.4.0", optional = true}
 pydeseq2 = {version = ">=0.3.5", optional = true}
-squidpy = {version = "*", optional = true}
 cell2cell = {version = "*", optional = true}
 muon = {version = "*", optional = true}
 mofax = {version = "*", optional = true}
@@ -57,7 +56,7 @@ bumpversion = "^0.6.0"
 
 [tool.poetry.extras]
 common = ["decoupler", "omnipath", "requests"]
-full = ["decoupler", "omnipath", "pydeseq2", "squidpy", "cell2cell", "muon", "mofax", "mofapy2", "corneto", "cvxpy", "cylp", "requests"]
+full = ["decoupler", "omnipath", "pydeseq2", "cell2cell", "muon", "mofax", "mofapy2", "corneto", "cvxpy", "cylp", "requests"]
 
 [build-system]
 requires = ["poetry-core>=1.0.0"]