pyproject.toml

[tool.poetry]
name = "camlhmp"
version = "1.1.0"
description = "Classification through yAML Heuristic Mapping Protocol"
authors = [
    "Robert A. Petit III <robbie.petit@gmail.com>",
]
license = "MIT"
readme = "README.md"
homepage = "https://github.com/rpetit3/camlhmp"
repository = "https://github.com/rpetit3/camlhmp"
keywords = ["bioinformatics", "bacteria", "serotype", "genotype"]

[tool.poetry.scripts]
camlhmp = "camlhmp.cli.camlhmp:main"
camlhmp-blast-alleles = "camlhmp.cli.blast.alleles:main"
camlhmp-blast-regions = "camlhmp.cli.blast.regions:main"
camlhmp-blast-targets = "camlhmp.cli.blast.targets:main"
camlhmp-blast-thresholds = "camlhmp.cli.blast.thresholds:main"
camlhmp-extract = "camlhmp.cli.extract:main"

[tool.poetry.dependencies]
python = "^3.11"
pyyaml = "^6.0.1"
executor = "^23.2"
rich = "^13.7.1"
rich-click = "^1.7.4"
biopython = "^1.83"

[tool.poetry.group.dev.dependencies]
executor = "^23.2"
flake8 = "^7.0.0"
isort = "^5.13.2"
black = "^24.4.0"

[build-system]
requires = ["poetry-core"]
build-backend = "poetry.core.masonry.api"