Releases: ropensci/targets
Releases · ropensci/targets
Error handling tweaks
targets 0.14.2
- Forward user-level custom error conditions to the top of the pipeline (#997, @alexverse).
- Link to the help page of the manual.
Bug fixes
targets 0.14.1
- Fix the command inserted for debug mode (#975).
- Set empty chunk options to ensure Target Markdown compatibility with the special "setup" chunk (#973, @KaiAragaki).
- Only store the first 50 warnings in the metadata, and cap the text of the warning messages at 2048 characters (#983, @thejokenott).
- Enhance the
tar_destroy()
help file (#988, @Sage0614). - Implement
destroy = "user"
intar_destroy()
.
Extend RNG seed functionality
targets 0.14.0
- Move
#!/bin/sh
line to the top of SLURMclustermq
template file (#944, #955, @GiuseppeTT). - Add new function
tar_path_script()
. - Rename
tar_store()
totar_path_store()
with deprecation. - Rename
tar_path()
totar_path_target()
with deprecation. - Add new function
tar_path_script_support()
. - Make Target Markdown target scripts dynamically locate their support scripts so the appropriate scripts can be found even when they are generated from one directory and sourced from another (#953, #957, @TylerGrantSmith).
- Allow user-side control of the seeds at the pipeline level.
tar_option_set()
now supports aseed
argument, and target-specific seeds are determined bytar_option_get("seed")
and the target name.tar_option_set(seed = NA)
disables seed-setting behavior but forcibly invalidates all the affected targets except whenseed
isFALSE
in the target'star_cue()
(#882, @sworland-thyme, @joelnitta). - Implement a
seed
argument intar_cue()
to control whether targets update in response to changing orNA
seeds (#882, @sworland-thyme, @joelnitta). - Reduce the number of per-target AWS/GCP storage API calls. Previously there were 3 API calls per target, including 2 HEAD requests. Now there is just 1 for a typical target (unless dependencies have to be downloaded). Relies on S3 strong read-after-write consistency (#958).
- Update the
tar_github_actions()
workflow file to use@v2
(#960, @kulinar). - Print helpful hints while debugging a target interactively (#961).
- Only attempt to debug a target when
callr_function
isNULL
(#961). - Make formats
"feather"
,"parquet"
,"file"
, and"url"
work witherror = "null"
(#969). - Declare formats
"keras"
and"torch"
superseded bytar_format()
. Documented in thetar_target()
help file. - Declare formats
"keras"
and"torch"
incompatible witherror = "null"
. Documented in thetar_target()
help file and in a warning thrown bytar_target()
viatar_target_raw()
. - Add a
convert
argument totar_format()
to allow customstore_convert_object()
methods (#970).
tidyselect compat
targets 0.13.5
- Use
any_of()
instead ofall_of()
in tests to ensure compatibility withtidyselect
1.1.2.9000 (#928, @hadley). - Make the
run.R
fromuse_targets()
executable (#929, @petrbouchal). - Add
#!/usr/bin/env Rscript
to the top ofrun.R
fromuse_targets()
(#929, @petrbouchal).
Reduce CRAN check time
targets 0.13.4
- Implement custom alternative to
skip_on_cran()
to avoid r-lib/testthat#1470 (comment). - Skip more tests on CRAN.
Package data and error messages
targets 0.13.3
Enhancements
- Print "no targets found" when there are no targets in the pipeline to check or build, or if the
name\ s
argument oftar_make()
does not identify any such targets in the pipeline (#923, @llrs). - Ignore
.packageName
,.__NAMESPACE__.
, and.__S3MethodsTable__.
when importing objects from pack
ages with theimports
option oftar_option_set()
. - Import datasets from packages in the
imports
option oftar_option_set()
(#926, @joelnitta). - Print target-specific elapsed runtimes in the verbose and timestamp reporters.
- Improve error messages in functions like
tar_read()
andtar_load()
when the data store is missing.
Nicer error handling
targets 0.13.2
Bug fixes
- Do not incorrectly reference feather resources for parquet storage.
Enhancements
- Simplify and improve error handling.
- In the
command
column oftar_manifest()
output, separate lines with "\n" instead of "\n" so the text output is straightforward to work with. - Add a
drop_missing
argument totar_manifest()
to hide/show columns with allNA
values. - Do not set Parquet version.
Fix reverse dependency checks
targets 0.13.1
- Fix reverse dependency checks.
{paws} options and tar_source()
targets 0.13.0
Bug fixes
- Do not bootstrap the junction of a stem unless the target is branched over (#858, @dipterix).
- For non-"file" AWS targets, immediately delete the scratch file after the target is uploaded (#889, @stuvet).
New features
- Allow extra arguments to
paws
functions via...
intar_resources_aws()
(#855, @michkam89). - Add
tar_source()
to conveniently source R scripts (e.g. in_targets.R
).
Enhancements
- Color ordinary
targets
messages the default theme color, and color warnings and errors red (#856, @gorkang). - Automatically supply job names in the scripts generated by
use_targets()
. - Inherit resources one-by-one in nested fashion from
tar_option_get("resources")
(#892). See the revised"Resources"
section of thetar_resources()
help file for details.
Improvements to use_targets(), tar_mermaid(), and error printing
targets 0.12.1
New features
- Add arguments
legend
andcolor
to further configuretar_mermaid()
(#848, @noamross). - For HPC schedulers like SLURM and SGE,
use_targets()
now creates ajob.sh
script to run the pipeline as a cluster job (#839).
Enhancements
- Use lapply() to source scripts in
use_targets()
. Avoids defining a global variable for the file. - Recursively find scripts to source in the
use_targets()
_targets.R
file. - Refactor error printing.