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Patch cuda dev tools (#736) #743

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merged 11 commits into from
Jan 23, 2024
Merged

Patch cuda dev tools (#736) #743

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f15c188
patch/cuda
cboettig Dec 23, 2023
54a4a09
install_R_deps as seperate method
cboettig Jan 5, 2024
c06a086
try 2
cboettig Jan 16, 2024
c1c7b0e
simpler mechanism
cboettig Jan 16, 2024
768598c
need /opt/venv on PATH
cboettig Jan 16, 2024
dd05a7c
recursive group permissions
cboettig Jan 16, 2024
a19206c
fix typos (thanks @noamross)
cboettig Jan 17, 2024
02951ef
use lowercase
cboettig Jan 19, 2024
0382082
run build/make-stacks.R
cboettig Jan 20, 2024
bba4a6e
4 spaces
cboettig Jan 23, 2024
18d9daf
update dockerfiles, run remaining build scripts
cboettig Jan 23, 2024
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2 changes: 1 addition & 1 deletion stacks/4.3.2.json
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Original file line number Diff line number Diff line change
Expand Up @@ -258,7 +258,7 @@
"PYTHON_CONFIGURE_OPTS": "--enable-shared",
"RETICULATE_AUTOCONFIGURE": "0",
"PURGE_BUILDDEPS": "FALSE",
"VIRUTAL_ENV": "/opt/venv",
"VIRTUAL_ENV": "/opt/venv",
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Hah!

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indeed! will be nice to have /opt/venv work on these images.

"PATH": "${PATH}:${VIRTUAL_ENV}/bin:${CUDA_HOME}/bin"
},
"COPY_a_script": "scripts/install_R_source.sh /rocker_scripts/install_R_source.sh",
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2 changes: 1 addition & 1 deletion stacks/devel.json
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Expand Up @@ -157,7 +157,7 @@
"PYTHON_CONFIGURE_OPTS": "--enable-shared",
"RETICULATE_AUTOCONFIGURE": "0",
"PURGE_BUILDDEPS": "FALSE",
"VIRUTAL_ENV": "/opt/venv",
"VIRTUAL_ENV": "/opt/venv",
"PATH": "${PATH}:${VIRTUAL_ENV}/bin:${CUDA_HOME}/bin"
},
"COPY_a_script": "scripts/install_R_source.sh /rocker_scripts/install_R_source.sh",
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