diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index 71e90d1..36c3008 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -39,7 +39,7 @@ jobs: # c.f. https://github.com/astral-sh/uv/issues/4333 for why snakemake lower bound run: | python -m pip install uv - uv pip install --system --upgrade pip setuptools wheel + uv pip install --system --upgrade pip wheel uv pip install --system '.[develop,local,reana]' 'snakemake>6.8.0' - name: List installed dependencies diff --git a/.github/workflows/head-of-dependencies.yml b/.github/workflows/head-of-dependencies.yml index 4b33831..9a3e97d 100644 --- a/.github/workflows/head-of-dependencies.yml +++ b/.github/workflows/head-of-dependencies.yml @@ -31,7 +31,7 @@ jobs: - name: Install dependencies run: | python -m pip install uv - uv pip install --system --upgrade pip setuptools wheel + uv pip install --system --upgrade pip wheel uv pip install --system --upgrade '.[develop,local,reana]' uv pip install --system --upgrade --pre '.[local]' @@ -66,7 +66,7 @@ jobs: - name: Install dependencies run: | python -m pip install uv - uv pip install --system --upgrade pip setuptools wheel + uv pip install --system --upgrade pip wheel uv pip install --system --upgrade '.[develop,local,reana]' uv pip uninstall --system adage uv pip install --system --upgrade git+https://github.com/yadage/adage.git @@ -102,7 +102,7 @@ jobs: - name: Install dependencies run: | python -m pip install uv - uv pip install --system --upgrade pip setuptools wheel + uv pip install --system --upgrade pip wheel uv pip install --system --upgrade '.[develop,local,reana]' uv pip uninstall --system packtivity uv pip install --system --upgrade git+https://github.com/yadage/packtivity.git @@ -138,7 +138,7 @@ jobs: - name: Install dependencies run: | python -m pip install uv - uv pip install --system --upgrade pip setuptools wheel + uv pip install --system --upgrade pip wheel uv pip install --system --upgrade '.[develop,local,reana]' uv pip uninstall --system yadage uv pip install --system --upgrade git+https://github.com/yadage/yadage.git diff --git a/.github/workflows/publish-package.yml b/.github/workflows/publish-package.yml index b4c5fd0..0b9686b 100644 --- a/.github/workflows/publish-package.yml +++ b/.github/workflows/publish-package.yml @@ -34,7 +34,7 @@ jobs: - name: Install build and twine run: | python -m pip install uv - uv pip install --system --upgrade pip setuptools wheel + uv pip install --system --upgrade pip wheel uv pip install --system build twine uv pip list --system