Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

What pheatmap values represent ? #89

Open
TSolDour opened this issue Jun 24, 2022 · 0 comments
Open

What pheatmap values represent ? #89

TSolDour opened this issue Jun 24, 2022 · 0 comments

Comments

@TSolDour
Copy link

Hi,

I'm a plotting a RNAseq normalized counts matrix using pheatmap function with a clustering based on euclidean distance. Counts values range from 5000 to 3 approximately and the heatmap legend ranges from 3 to -3. So, I don't understand what is the correspondance between the matrix values and the values presented in the heatmap.

Do you have any clue about that ?

Thanks a lot !

Thomas.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant