Feedback for Leslie's project

[fmichonneau]

Hi @Kollarlm,

I think a lot of people will be interested by the tutorial you will develop!

To get started, I suggest you bring a dataset that could be used to do some HWE tests. I think a few packages can do it, do you know which one you want to use to start?

Running R on the cluster isn't too difficult. Depending on the interest in the class, I may do a quick lecture about it, otherwise, I can just show you. Do you have an account for the HPC?

Comment on this thread if you have any questions.

Cheers,
-- François

[cmulligan]

I'm also interested in knowing how to run analyses on the cluster.

Connie

---

From: Francois Michonneau [[email protected]]
Sent: Wednesday, January 28, 2015 10:16 PM
To: r-bio/logistics
Subject: [logistics] Feedback for Leslie's project (#8)

Hi @Kollarlmhttps://github.com/Kollarlm,

I think a lot of people will be interested by the tutorial you will develop!

To get started, I suggest you bring a dataset that could be used to do some HWE tests. I think a few packages can do it, do you know which one you want to use to start?

Running R on the cluster isn't too difficult. Depending on the interest in the class, I may do a quick lecture about it, otherwise, I can just show you. Do you have an account for the HPC?

Comment on this thread if you have any questions.

Cheers,
-- François

—
Reply to this email directly or view it on GitHubhttps://github.com//issues/8.

[JUngvari]

I am also interested in the cluster, and in pop.gen packages as well. I also have a relatively simple dataset of microsatellite data from 3 loci to play around with, if you are interested Leslie.
~Judit

[Kollarlm]

Hi Judit,

I may take you up on that data set! I have a data set that Stuart is letting me use but I would not mind looking at microsatellite data as well. I have mainly been looking at a package called "genetics" at least that is what the reference manual called it.