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I tried out 4 EI-MS simulations of the same substance (LSD) with different parameters:
I think the last 2 simulations crashed because the simulation time is shorter than the time scale of the internal dynamics, but I'm not sure. The first run of |
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fyi, as soon as you have sampled the groundstate MD, you do not need to re-run the GS again for each run. i.e. you can use the |
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tmax
is the time for the sampling of the MDs. So it depends a bit when you reduced the value - directly at the beginning or after the groundstate sampling?Reducing the
tmax
to a too small value for a large or flexible molecule will try to access structures for which no snapshot is available.That means increasing the
tmax
by some value will fix this. Maybe try50
, and increase if it still crashes, or reduce if you want to reduce the total timing, until you see crashing again.fyi, as soon as you have sampled the groundstate MD, you do not need to re-run the GS again for each run. i.e. you can use the
.gs
file as starting point for a production run at e.g.eimp 80
andtmax 10
, but do not …