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notebooks.yml
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# This workflow is used to test, if the code is compatible with jupyter notebooks providing usage examples
name: Notebooks
on:
push:
branches: [ main ]
pull_request:
jobs:
build:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- name: Merge Notebook environment
run: |
cp binder/environment.yml environment.yml
tail --lines=+4 .ci_support/environment-notebooks.yml >> environment.yml
echo -e "channels:\n - conda-forge\n" > .condarc
- name: Setup Mambaforge
uses: conda-incubator/setup-miniconda@v3
with:
python-version: "3.12"
miniforge-version: latest
condarc-file: .condarc
environment-file: environment.yml
- name: Install
shell: bash -l {0}
run: |
pip install versioneer[toml]==0.29
pip install . --no-deps --no-build-isolation
mkdir config
cp -r tests/config/flux config
- name: Notebooks with config
shell: bash -l {0}
run: >
flux start
papermill notebooks/example_config.ipynb example-config-out.ipynb -k "python3"
- name: Notebooks dynamic
shell: bash -l {0}
run: >
flux start
papermill notebooks/example_queue_type.ipynb example-queue-type-out.ipynb -k "python3"