.gitignore

results/
*.lock
_dev
# Ignore Nextflow-related files and directories
.nextflow*
work
_dev/in_progress*
.dev

# Ignore data directory
tests/data

# anything not ipynb related
tutorials/*
!tutorials/*.ipynb


# Byte-compiled / optimized / DLL files
__pycache__/
*.py[cod]
*$py.class

# C extensions
*.so

# Distribution / packaging
.Python
build/
develop-eggs/
dist/
downloads/
eggs/
.eggs/
lib/
lib64/
parts/
sdist/
var/
wheels/
*.egg-info/
.installed.cfg
*.egg
.conda

# Installer logs
pip-log.txt
pip-delete-this-directory.txt

# Unit test / coverage reports
htmlcov/
.tox/
.coverage
.coverage.*
.cache
nosetests.xml
coverage.xml
*.cover
.hypothesis/
cache*.arrow
cache*.yaml

# Translations
*.mo
*.pot

# Django stuff:
*.log
local_settings.py

# Flask stuff:
instance/
.webassets-cache

# Scrapy stuff:
.scrapy

# Sphinx documentation
docs/_build/

# PyBuilder
target/

# Jupyter Notebook
.ipynb_checkpoints
-checkpoint.ipynb

# IPython
profile_default/
ipython_config.py

# pyenv
.python-version

# pipenv
# According to https://pipenv.pypa.io/en/latest/advanced/#pipfile-vs-pipfilelock
# PIPENV_VENV_IN_PROJECT=1
Pipfile.lock

# Poetry
# https://python-poetry.org/docs/basic-usage/#configuring-poetry
.poetry/

# virtualenv
venv/
env/

# Spyder project settings
.spyderproject
.spyproject

# Rope project settings
.ropeproject

# Idea project settings
.idea/

# PyCharm project settings
.idea/

# Visual Studio Code settings
.vscode/
.vs/

# MyPy
.mypy_cache/

# pycodestyle
.pytest_cache/

#Docker
*Dockerfile
*dockerignore