Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

add this to the "submit phenotypes HTP" somewhere #2106

Open
ValWood opened this issue Oct 20, 2023 · 2 comments
Open

add this to the "submit phenotypes HTP" somewhere #2106

ValWood opened this issue Oct 20, 2023 · 2 comments

Comments

@ValWood
Copy link
Member

ValWood commented Oct 20, 2023

This is @manulera code to create the phenotype submission spreadsheet for heterogeneous phenotypes

from https://elifesciences.org/articles/88229

To generate genotype-to-phenotype datasets in phaf format that can be directly submitted to PomBase, we used code available on Zenodo
https://zenodo.org/records/8254596

we should link to from
https://www.pombase.org/submit-data/bulk-annotation

@ValWood
Copy link
Member Author

ValWood commented Nov 28, 2023

We won't do anything with this yet, but we can help people if they would like to use it.

This ticket is slightly related
#1859

@ValWood ValWood changed the title add this to the "submit phenotypes" somewhere add this to the "submit phenotypes HTP" somewhere Nov 29, 2023
@ValWood
Copy link
Member Author

ValWood commented Jul 3, 2024

One plan is just to tell people that we can help with preparing HTP phenotype screens into FYPO format

@ValWood ValWood added announce and removed discuss labels Sep 4, 2024
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Projects
None yet
Development

No branches or pull requests

2 participants