From 6495fde10bdb03b823f0cd5a18e57cfce1b3182a Mon Sep 17 00:00:00 2001 From: aineniamh Date: Tue, 14 Nov 2023 13:11:19 +0000 Subject: [PATCH] changing to snake case --- piranha/analysis/haplo_functions.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/piranha/analysis/haplo_functions.py b/piranha/analysis/haplo_functions.py index 9b9af1a..36a68d7 100644 --- a/piranha/analysis/haplo_functions.py +++ b/piranha/analysis/haplo_functions.py @@ -71,7 +71,7 @@ def collapse_close(flopp_file,distance_cutoff,vcf_file): new_h[pos]['assigned allele'] = max(new_h[pos]['base support counts'],key=lambda x:new_h[pos]['base support counts'][x]) collapsed.append(haplo_pos2) - collapseIntoCurrent.append(haplo_pos2) + collapse_into_current.append(haplo_pos2) haplo_pos2 += 1