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I have a quick question regarding the system files. I was reviewing the system 8q5i__1__1.GA__1.ZB, but I noticed that the DNA complex seems to be missing from both the system.cif and receptor.cif files. Could you confirm if this is expected?
Thank you for your help, I've attached a photo below:
The text was updated successfully, but these errors were encountered:
@danielzeng-gt , thanks a lot for bringing this to our attention!
Although there is a direct interaction between the ligand and the protein lysine sidechain - it is missing the critical context of DNA that makes interactions with both. We will fix this bug in the future release.
In the meantime, you could consider using annotations of system_num_interactions - to filter our entries that have less than a satisfactory number of interactions (the above case has 1).
Dear Plinder Authors,
I have a quick question regarding the system files. I was reviewing the system
8q5i__1__1.GA__1.ZB
, but I noticed that the DNA complex seems to be missing from both thesystem.cif
andreceptor.cif
files. Could you confirm if this is expected?Thank you for your help, I've attached a photo below:
The text was updated successfully, but these errors were encountered: