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toRDF() without providing a base IRI doesn't produce phylorefs and phylogenies #113

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gaurav opened this issue Jan 25, 2022 · 0 comments
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gaurav commented Jan 25, 2022

In phyx.js v1.0.1, using new PhyxWrapper({...}).toRDF() without providing a baseIRI on the Brochu 2003 example in Klados (https://github.com/phyloref/klados/blob/5ff43402afdf5a1f53fce3447537e4f92a4f8932/public/examples/brochu_2003.json) doesn't emit phylogenies and phyloreferences for some reason. We appear to have missed this during testing since -- for replicability reasons -- all the tests in this repo use a base IRI.

  • Add a test that calls .toRDF() without including a base IRI.
  • Figure out why it doesn't emit phylorefs and phylogenies.
  • Fix the bug
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