Our project mainly implements algorithms concerning string matching and compression. To gain more information about the usage of our function, please turn to our manual. Thanks!
Usage:
First please call make to generate the executable file and then run ./bin/match_compr.static to start program.
m: Match the DNA sequence with pattern strings.
p l r: Check whether the substring (from location l to r) is palindrome.
c pos ch: Modify the nucleotide at location pos to ch.
h: Print the huffman code.
q: Quit.
Group member:
Jiazheng Pei 519111910231
Gufeng Yu 519111910244
Zhijin Zhang 519111910294
Instructor: Maoying Wu ([email protected]) TA: Xinyi Mou ([email protected])