.pre-commit-config.yaml

# See https://pre-commit.com for more information
# See https://pre-commit.com/hooks.html for more hooks
repos:
  - repo: https://github.com/kynan/nbstripout
    rev: 0.8.1
    hooks:
     - id: nbstripout
       args: [--drop-empty-cells]
  - repo: https://github.com/pre-commit/pre-commit-hooks
    rev: v5.0.0
    hooks:
      - id: trailing-whitespace
      - id: end-of-file-fixer
      - id: check-toml
      - id: check-xml
      - id: check-yaml
      - id: check-added-large-files
      - id: no-commit-to-branch
      - id: pretty-format-json
        args: [--autofix]
        exclude: '\.ipynb$'
      - id: mixed-line-ending
        args: [--fix=lf]
  - repo: https://github.com/PyCQA/bandit
    rev: 1.8.0
    hooks:
        - id: bandit
          args: [ "-c", "pyproject.toml" ]
          additional_dependencies: [ "bandit[toml]" ]
  - repo: https://github.com/igorshubovych/markdownlint-cli
    rev: v0.43.0
    hooks:
      - id: markdownlint
        args: [--fix]
  - repo: https://github.com/pre-commit/mirrors-mypy
    rev: v1.14.0
    hooks:
      - id: mypy
        additional_dependencies:
          - pydantic
  - repo: https://github.com/charliermarsh/ruff-pre-commit
    rev: v0.8.4
    hooks:
      - id: ruff-format
        types_or: [python, pyi, jupyter]
      - id: ruff
        args: [--fix, --exit-non-zero-on-fix]
        types_or: [python, pyi, jupyter]
  - repo: https://github.com/crate-ci/typos
    rev: v1.28.4
    hooks:
      - id: typos
        args: [
          --force-exclude,
          # --write-changes (Don't use this to stop typos making auto-corrections)
        ]
  - repo: https://github.com/owenlamont/uv-secure
    rev: 0.2.0
    hooks:
      - id: uv-secure
  - repo: https://github.com/adrienverge/yamllint.git
    rev: v1.35.1
    hooks:
      - id: yamllint