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    88 repositories

    • ImSwitch

      Public
      ImSwitch is a software solution in Python that aims at generalizing microscope control by providing a solution for flexible control of multiple microscope modalities.
      Python
      •
      GNU General Public License v3.0
      •53•11•33•0•Updated Nov 29, 2024Nov 29, 2024

    • UC2-REST

      Public
      UC2 code for using the REST API with electronic modules (LED, motors, etc.)
      Python
      •
      Other
      •3•8•4•0•Updated Nov 27, 2024Nov 27, 2024

    • ImSwitch-ReactAPP

      Public
      This is an attempt to have a React frontend for the webrtc-based control of imswitch
      JavaScript
      •1•0•1•0•Updated Nov 21, 2024Nov 21, 2024

    • openUC2.github.io

      Public
      Wiki pages for the openUC2 system based on Docusaurus
      HTML
      •
      MIT License
      •5•0•0•0•Updated Nov 20, 2024Nov 20, 2024

    • ImStitch

      Public
      An Arkitekt app to stitch images
      Python
      •1•0•0•0•Updated Nov 19, 2024Nov 19, 2024

    • ImSwitchDockerInstall

      Public
      This is the repository to install and launch ImSwitch in Docker
      Python
      •0•0•0•0•Updated Nov 19, 2024Nov 19, 2024

    • ashlarUC2

      Public
      ASHLAR: Alignment by Simultaneous Harmonization of Layer/Adjacency Registration
      Python
      •
      MIT License
      •42•0•0•0•Updated Nov 18, 2024Nov 18, 2024

    • imswitch-arkitekt-next

      Public
      Plugin to implement Arkitekt-Next as a standalone Client
      Python
      •
      MIT License
      •0•0•1•0•Updated Nov 14, 2024Nov 14, 2024

    • openUC2-OT2-PlateGripper

      Public
      Gripper for th eopentrons
      0•3•0•0•Updated Nov 14, 2024Nov 14, 2024

    • UC2-GIT

      Public
      Respository for Open-Science modular microscope system.
      pythonraspberry-pidiyprinting-3dincubatormicroscope
      Jupyter Notebook
      •
      Other
      •69•464•42•1•Updated Nov 10, 2024Nov 10, 2024

    • UC2Serial

      Public
      This is an Android APP that can control the UC2 Boards via USB Serial
      Java
      •0•0•0•0•Updated Nov 4, 2024Nov 4, 2024

    • cubelab

      Public
      Our 3D parts repository for modular optics and beyond.
      Ruby
      •
      MIT License
      •49•1•0•0•Updated Nov 2, 2024Nov 2, 2024

    • openUc2MicroManagerDeviceAdapter

      Public
      This is an attempt to use the openUC2 board inside micromanager
      C++
      •0•0•0•0•Updated Oct 28, 2024Oct 28, 2024

    • micro-manager

      Public
      Microscope control and image acquisition integrated with ImageJ
      Java
      •230•0•0•0•Updated Oct 24, 2024Oct 24, 2024

    • imswitch-pi-gen

      Public
      Shell
      •0•0•2•0•Updated Oct 24, 2024Oct 24, 2024

    • openUC2_SOOP

      Public
      Other
      •0•0•15•0•Updated Sep 24, 2024Sep 24, 2024

    • ImSwitchConfig

      Public
      Jupyter Notebook
      •2•3•5•0•Updated Aug 29, 2024Aug 29, 2024

    • openUC2-Lightsheet

      Public
      This is the openUC2 light-sheet system.
      0•1•0•0•Updated Aug 16, 2024Aug 16, 2024

    • openUC2-ESP32InfoScreen

      Public
      C
      •1•0•0•0•Updated Jul 11, 2024Jul 11, 2024

    • ImTools

      Public
      A random selection of tools useful for ImSwitch, Testing and Debugging
      Python
      •0•0•0•0•Updated Jul 3, 2024Jul 3, 2024

    • imswitchclient

      Public
      This is a REST Client for the ImSwitch Fastapi
      Python
      •
      MIT License
      •0•1•0•0•Updated Jun 21, 2024Jun 21, 2024

    • imswitch-arkitekt

      Public
      This imswitch plugin will add arkitekt support to imswitch
      Python
      •
      MIT License
      •0•0•0•0•Updated Jun 19, 2024Jun 19, 2024

    • ut2_module

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated Jun 16, 2024Jun 16, 2024

    • openUC2_MicROScopy

      Public
      This is a collection of files that will be used to integrate openUC2 into ROS2
      Python
      •0•0•0•0•Updated May 9, 2024May 9, 2024

    • ImSwitchInstaller

      Public
      An electron-based installer for ImSwitch
      Python
      •
      MIT License
      •2•0•9•0•Updated May 6, 2024May 6, 2024

    • ImSwitchNode-Planktoscope

      Public
      This is a copy of the Planktoscope Node Red GUI/Dashboard that works with ImSwitch (fastapi)
      GNU General Public License v3.0
      •0•0•0•0•Updated May 1, 2024May 1, 2024

    • imswitch-sim

      Public
      This is a plugin that acquires and reconstructs SIM Images in ImSwitch
      Python
      •
      MIT License
      •0•0•1•0•Updated May 1, 2024May 1, 2024

    • cookiecutter-imswitch

      Public
      Cookiecutter for imswitch plugins
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •41•0•0•0•Updated Apr 6, 2024Apr 6, 2024

    • Hackathon-UC2-LLM

      Public
      These are some information on how we want to connect the LLM world to smart microscopy
      0•1•0•0•Updated Mar 13, 2024Mar 13, 2024

    • imswitch-flimlabs

      Public
      This is the ImSwitch Plugin for the FLIMLabs SPAD array
      Python
      •
      MIT License
      •0•0•0•0•Updated Feb 25, 2024Feb 25, 2024