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@bioinfo-hcpa Bioinformatics Core @ HCPA

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    16 repositories

    • codes_and_scripts

      Public
      Repository of scripts of the analysis made in the Bioinformatics Core
      R
      •
      GNU General Public License v3.0
      •0•4•0•0•Updated Oct 11, 2024Oct 11, 2024

    • biovars

      Public
      Tool for joining all the bioinfo-hcpa's variant information retrieval APIs.
      Python
      •
      GNU General Public License v3.0
      •0•4•3•0•Updated Aug 4, 2024Aug 4, 2024

    • pynoma

      Public
      A Python API to communicate with gnomAD database.
      Python
      •
      MIT License
      •0•7•1•0•Updated Jul 15, 2024Jul 15, 2024

    • pyABraOM

      Public
      A Python API to comunicate with ABraOM database.
      Python
      •
      MIT License
      •0•3•1•0•Updated May 17, 2024May 17, 2024

    • GEO_scraper

      Public
      Scrapes information about studies from an input GEO search html page for accelerating meta-analysis.
      Python
      •1•0•0•0•Updated Apr 15, 2024Apr 15, 2024

    • bioselector

      Public
      BioSelector is an application powered by machine learning for biomarker discovery.
      JavaScript
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Nov 3, 2022Nov 3, 2022

    • efs-assembler

      Public
      A Python package for building and testing ensemble feature selection structures with scientific validated methods and an extensible architecture, allowing user-defined feature selection and aggregation algorithms both in Pyhton and R.
      Python
      •
      GNU General Public License v3.0
      •3•1•0•0•Updated Nov 3, 2022Nov 3, 2022

    • Bioinformatica

      Public
      Pipelines e scripts para análises em Bioinformática
      GNU General Public License v3.0
      •25•0•0•0•Updated Jun 9, 2022Jun 9, 2022

    • training-material

      Public
      A collection of Galaxy-related training material
      HTML
      •
      MIT License
      •909•0•0•0•Updated Jan 20, 2022Jan 20, 2022

    • bioinfo-hcpa

      Public
      2•0•0•0•Updated Dec 22, 2021Dec 22, 2021

    • publications

      Public
      Archives of publications (articles, posters) about the Bioinformatics Core
      GNU General Public License v3.0
      •0•0•0•0•Updated Dec 20, 2021Dec 20, 2021

    • github-paper

      Public
      Plos in Computational Biology paper related with github for researchers, code, source and document
      Jupyter Notebook
      •
      Other
      •20•0•0•0•Updated May 31, 2021May 31, 2021

    • research-group-web

      Public
      a template for research group sites
      HTML
      •
      Other
      •407•0•0•0•Updated Apr 4, 2021Apr 4, 2021

    • bioinfo-hcpa.github.io

      Public
      0•1•0•0•Updated Mar 31, 2021Mar 31, 2021

    • pythonnobrasil

      Public
      🐍🇧🇷📅 Eventos Python no Brasil
      Python
      •
      MIT License
      •37•1•0•0•Updated Jul 15, 2020Jul 15, 2020

    • BestPractices

      Public
      A Brief Summary Of Best Practices For Bioinformatics
      2•0•0•0•Updated Feb 2, 2017Feb 2, 2017