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    49 repositories

    • homepage

      Public
      This repository contains the homepage of the KohlbacherLab.
      researchhomepageabitbi
      TeX
      •
      MIT License
      •15•1•0•9•Updated Dec 23, 2024Dec 23, 2024

    • case_management_mvh

      Public
      Fallmanagement Modellvorhaben Genomsequenzierung (MV GenomSeq) nach § 64e SGB V
      MIT License
      •0•1•0•0•Updated Nov 18, 2024Nov 18, 2024

    • nse-mv-genomseq

      Public
      Klinische Dokumentation für das Netzwerk Seltene Erkrankungen (MV GenomSeq)
      MIT License
      •0•2•0•0•Updated Nov 6, 2024Nov 6, 2024

    • CLAUDIO

      Public
      Structural analysis, mapping, validation, visualization, and modeling of protein cross-links on protein and protein-protein interaction.
      Python
      •
      MIT License
      •1•0•3•0•Updated Oct 30, 2024Oct 30, 2024

    • assignment-tool

      Public
      Assignment tool for grading task sheets
      Python
      •
      MIT License
      •2•0•2•1•Updated Jun 14, 2024Jun 14, 2024

    • bwHC-REST-API-Gateway

      Public
      API Gateway component to expose a REST API for all combined bwHC services
      Scala
      •
      MIT License
      •2•0•1•0•Updated Feb 8, 2024Feb 8, 2024

    • bwHC-Data-Validation-Service

      Public
      bwHC Entry Point Service for data upload, to perform validity checks
      Scala
      •
      MIT License
      •1•1•0•0•Updated Feb 8, 2024Feb 8, 2024

    • bwHC-Query-Service

      Public
      bwHC-Service for queries on MTB data
      Scala
      •
      MIT License
      •0•0•0•0•Updated Feb 8, 2024Feb 8, 2024

    • bwHC-View-Objects

      Public
      Display DTOs (Views) for bwHC MTB model
      Scala
      •
      MIT License
      •0•0•0•0•Updated Feb 8, 2024Feb 8, 2024

    • EVcouplings

      Public
      Evolutionary couplings
      Jupyter Notebook
      •
      Other
      •75•0•0•1•Updated Feb 7, 2024Feb 7, 2024

    • epytope

      Public
      Python-based framework for computational immunomics
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •7•14•7•1•Updated Jan 11, 2024Jan 11, 2024

    • bwhc-frontend

      Public
      Portal UI Prototype (Frontend Application) of bwHealthCloud
      uiprototypefrontenduxportalbwhcbwhealthcloud
      MIT License
      •2•1•1•1•Updated Dec 13, 2023Dec 13, 2023

    • bwhc-authentication-api

      Public
      Simple components for authentication in bwhc
      Scala
      •
      MIT License
      •0•0•0•0•Updated Dec 12, 2023Dec 12, 2023

    • bwHC-User-Service

      Public
      User management service for bwHC
      Scala
      •
      MIT License
      •0•0•0•0•Updated Dec 12, 2023Dec 12, 2023

    • bwHC-FHIR-Mappings

      Public
      Mappings between bwHC internal DTO model and FHIR
      Scala
      •
      MIT License
      •0•0•0•0•Updated Dec 12, 2023Dec 12, 2023

    • bwHC-MTB-DTO-Extensions

      Public
      Extension methods for MTB DTOs
      Scala
      •
      MIT License
      •0•0•0•0•Updated Dec 12, 2023Dec 12, 2023

    • bwHC-Data-Transfer-Objects

      Public
      Extracted DTOs from https://github.com/KohlbacherLab/bwHC-Data-Validation-Service
      Scala
      •
      MIT License
      •1•0•0•0•Updated Dec 12, 2023Dec 12, 2023

    • bwHC-Medication-Catalog

      Public
      Scala component for bwHC Medication catalog
      Scala
      •
      MIT License
      •0•0•0•0•Updated Dec 6, 2023Dec 6, 2023

    • bwHC-ICD-Catalogs

      Public
      Scala component for ICD Catalogs (ICD-10-GM and ICD-O-3)
      Scala
      •
      MIT License
      •0•0•0•0•Updated Nov 28, 2023Nov 28, 2023

    • Generators

      Public
      SCALA and JAVA utils for custom data object generators
      Java
      •
      MIT License
      •1•0•0•0•Updated Sep 19, 2023Sep 19, 2023

    • bwHC-CSV-Mappings

      Public
      CSV Mappings for MTB Data Objects
      Scala
      •
      MIT License
      •0•0•0•0•Updated Jul 28, 2023Jul 28, 2023

    • bwhc-backend

      Public
      Overview of repositories for bwHC backend
      Dockerfile
      •
      MIT License
      •2•1•0•0•Updated Jul 17, 2023Jul 17, 2023

    • nextflow-clinvap

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated Jun 1, 2023Jun 1, 2023

    • XLEC

      Public
      R
      •1•1•0•0•Updated May 24, 2023May 24, 2023

    • bwhc-repository-utils

      Public
      Utilities for in-memory or file-system-backed data storage (repositories) in bwHC
      Scala
      •
      MIT License
      •1•0•0•0•Updated May 23, 2023May 23, 2023

    • bwHC-Utilities

      Public
      Utility components for bwHC
      Scala
      •
      MIT License
      •0•0•0•0•Updated May 22, 2023May 22, 2023

    • bwHC-HGNC-Catalog

      Public
      HGNC catalog component for bwHC
      Scala
      •
      MIT License
      •1•0•0•0•Updated May 22, 2023May 22, 2023

    • foodomics-cacao-biomarkeridentification

      Public
      Python
      •0•0•0•0•Updated Apr 13, 2023Apr 13, 2023

    • MetaboAssayLibToMSPConversion

      Public
      Python
      •0•0•0•0•Updated Apr 10, 2023Apr 10, 2023

    • MetaboAssayLibToSkylineTransitionListConversion

      Public
      Python
      •0•0•0•0•Updated Apr 10, 2023Apr 10, 2023