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    22 repositories

    • hom-2

      Public
      HASTE-o-matic: Interactive, Stream-based Analysis of Large Datasets with Information Hierarchies
      Java
      •2•1•19•2•Updated May 25, 2023May 25, 2023

    • CP-Chem-MoA

      Public
      Jupyter Notebook
      •2•0•0•0•Updated Feb 21, 2023Feb 21, 2023

    • k8s-deployments

      Public
      Deployment and configuration scripts for the image processing pipeline application at https://github.com/HASTE-project/cellprofiler-pipeline.
      Shell
      •
      BSD 3-Clause "New" or "Revised" License
      •2•1•2•0•Updated Apr 11, 2021Apr 11, 2021

    • spark-hdfs-deployment

      Public
      Ansible playbooks and roles for the HASTE pipeline
      0•0•1•0•Updated Mar 8, 2021Mar 8, 2021

    • haste-agent

      Public
      Desktop application which streams new/modified files to the HASTE Cloud - intended for microscopes
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •1•2•0•0•Updated Feb 15, 2021Feb 15, 2021

    • haste-gateway

      Public
      Web gateway for the HASTE Cloud
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Feb 7, 2021Feb 7, 2021

    • cellprofiler-pipeline

      Public
      Kubernetes-based pipeline for CellProfiler
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •1•0•3•0•Updated Jan 25, 2021Jan 25, 2021

    • HasteStorageClient

      Public
      Client for HASTE Storage Engine
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •2•0•0•0•Updated Jan 25, 2021Jan 25, 2021

    • haste-report-generator

      Public
      Tool to generate report of stream processing
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Aug 4, 2020Aug 4, 2020

    • bin-packing-paper

      Public
      Repo for bin packing paper
      Scala
      •0•0•0•0•Updated Jul 2, 2020Jul 2, 2020

    • HarmonicIO

      Public
      Lightweight stream processing engine for scientific data
      Python
      •6•2•9•2•Updated Jul 2, 2020Jul 2, 2020

    • HarmonicPE

      Public
      Processing Daemon for HarmonicIO
      Python
      •2•1•0•1•Updated Jan 6, 2020Jan 6, 2020

    • haste-image-analysis-container2

      Public
      HASTE Image Analysis Container - intended for direct K8 deployment (without HIO)
      Python
      •1•0•0•0•Updated Mar 2, 2019Mar 2, 2019

    • haste-image-analysis-container

      Public
      HASTE example processing node, using Harmonic IO streaming connector and Haste Storage Client
      Python
      •2•0•0•2•Updated Jan 30, 2019Jan 30, 2019

    • HarmonicIOSetup

      Public
      Ansible playbooks for installing and starting Harmonic IO on a virtual environment
      Shell
      •3•1•0•0•Updated Jan 30, 2019Jan 30, 2019

    • windowed-conformal-model

      Public
      Conformal Model for Predicting Interestingness of Microscopy Images based on Windowed Analysis of Image Features
      Python
      •2•0•0•1•Updated Jan 30, 2019Jan 30, 2019

    • haste-ansible

      Public
      Ansible scripts for deployment of core HASTE Servers
      Shell
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated Jan 29, 2019Jan 29, 2019

    • HarmonicIO-supervisord-DEPRECATED

      Public archive
      WIP supervisord for HIO
      Python
      •0•0•0•0•Updated Aug 21, 2018Aug 21, 2018

    • benchmarking-tools

      Public
      Tools for benchmarking the HASTE pipeline and associated software
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated May 2, 2018May 2, 2018

    • microscope-simulator

      Public
      Simulate a high-content imaging experiment
      Python
      •1•0•6•1•Updated Mar 18, 2018Mar 18, 2018

    • HarmonicSC-deprecated

      Public
      Python
      •2•0•0•0•Updated Dec 18, 2017Dec 18, 2017

    • dockercloud-rockmongo

      Public
      Run rockmongo
      PHP
      •
      Apache License 2.0
      •2•0•0•0•Updated Dec 8, 2017Dec 8, 2017