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@EcoGRAPH EcoGRAPH: Ecological and Geospatial Research and Applications in Planetary Health

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    12 repositories

    • ecograph.github.io

      Public
      Website for the EcoGRAPH research group
      HTML
      •
      MIT License
      •16k•1•0•0•Updated Dec 19, 2024Dec 19, 2024

    • disclim

      Public
      Functions for ecological modeling of DISease and CLIMate relationships
      R
      •0•0•0•0•Updated Oct 18, 2024Oct 18, 2024

    • ArboMAP

      Public
      Arbovirus Modeling and Prediction to Forecast Mosquito-Borne Disease Outbreaks
      HTML
      •
      GNU General Public License v3.0
      •8•6•0•0•Updated Jun 2, 2023Jun 2, 2023

    • epidemia_reach

      Public
      Retrieving Environmental Analytics for Climate and Health (REACH)
      JavaScript
      •1•4•0•0•Updated Nov 15, 2022Nov 15, 2022

    • gaffer

      Public
      Genetic algorithm package
      R
      •1•0•0•0•Updated Jul 9, 2021Jul 9, 2021

    • epidemia_gee

      Public
      A python package which can be used in R to get the required environmental data for EPIDEMIA forecasting. Demo script EPIDEMIA_GEE_python.R in https://github.com/EcoGRAPH/epidemiar-demo/ under the GEE folder
      epidemia
      Python
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Jun 16, 2021Jun 16, 2021

    • twst_event_detection_demo

      Public
      Project with code accompaniment to article in BMC Public Health: "Comparing Malaria Early Detection Methods in a Declining Transmission Setting in Northwestern Ethiopia." Uses synthetic data for demonstration purposes ONLY.
      R
      •
      MIT License
      •0•0•0•0•Updated Apr 30, 2021Apr 30, 2021

    • clusterapply

      Public
      Apply a function in parallel on data sets that are split by some factor variable
      epidemia
      R
      •
      MIT License
      •0•0•0•0•Updated Mar 5, 2021Mar 5, 2021

    • epidemiar

      Public
      R package with modeling, forecasting, and early detection & early warning alerts code for EPIDEMIA forecasting reports. The Epidemic Prognosis Incorporating Disease and Environmental Monitoring for Integrated Assessment (EPIDEMIA) Forecasting System is a set of tools coded in free, open-access software, that integrate surveillance and environmen…
      epidemia
      R
      •
      MIT License
      •5•11•0•0•Updated Jan 20, 2021Jan 20, 2021

    • epidemiar-demo

      Public
      Demo R project to be used with package epidemiar for environmentally mediated disease modeling and forecasting, integrating data from epidemiological surveillance & environmental drivers. Demo is for malaria in Amhara region, Ethiopia. Epidemiological data are artificial and should not be used for research or public health. Find epidemiar here: h…
      epidemia
      R
      •
      MIT License
      •3•6•0•0•Updated Jun 26, 2020Jun 26, 2020

    • bambyfactor

      Public
      streamlined example of distributed lags in bam and various methods of solution
      R
      •0•0•0•0•Updated Feb 24, 2020Feb 24, 2020

    • r_workshop_epidemia

      Public
      Tutorials for an introduction to R and using the EPIDEMIA forecasting system.
      epidemia
      R
      •
      GNU General Public License v3.0
      •1•1•0•0•Updated Apr 18, 2019Apr 18, 2019