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    • Generic Agent Base Modeling-Simulation
      Java
      0000Updated Dec 12, 2024Dec 12, 2024
    • Jupyter Notebook
      0000Updated Dec 10, 2024Dec 10, 2024
    • Covid Geomodeller
      Jupyter Notebook
      MIT License
      2400Updated Nov 21, 2024Nov 21, 2024
    • TypeScript
      MIT License
      0000Updated Sep 9, 2024Sep 9, 2024
    • This a proof of concept of the standardised data for the State of NY
      Jupyter Notebook
      MIT License
      0000Updated May 6, 2024May 6, 2024
    • Python
      0100Updated Sep 13, 2023Sep 13, 2023
    • HTML
      MIT License
      0100Updated Jun 16, 2023Jun 16, 2023
    • Jupyter Notebook
      0000Updated May 16, 2023May 16, 2023
    • 0000Updated May 8, 2023May 8, 2023
    • Jupyter Notebook
      MIT License
      0000Updated Dec 14, 2022Dec 14, 2022
    • KaXim

      Public
      Kappa for Expanded Simulations
      C++
      0110Updated Dec 8, 2022Dec 8, 2022
    • Python
      0000Updated Aug 18, 2022Aug 18, 2022
    • 0000Updated Apr 8, 2022Apr 8, 2022
    • Python
      0000Updated Sep 7, 2021Sep 7, 2021
    • alphafold

      Public
      Open source code for AlphaFold.
      Python
      Apache License 2.0
      2.3k000Updated Jul 31, 2021Jul 31, 2021
    • Jupyter Notebook
      GNU General Public License v3.0
      0000Updated Jun 3, 2021Jun 3, 2021
    • En formato estándar
      Jupyter Notebook
      Other
      972000Updated Mar 28, 2021Mar 28, 2021
    • Nengo

      Public
      Jupyter Notebook
      GNU General Public License v3.0
      0000Updated Nov 2, 2020Nov 2, 2020
    • Python
      0010Updated Sep 16, 2020Sep 16, 2020
    • Public repository of developed scripts to read, process and create models.
      Python
      MIT License
      0000Updated Nov 13, 2019Nov 13, 2019
    • BBRC

      Public
      Models for Biochemical and Biophysical Research Communications manuscript
      GNU General Public License v3.0
      1000Updated Aug 21, 2018Aug 21, 2018
    • PISKaS

      Public
      Parallel Implementation of a Spatial Kappa Simulator
      OCaml
      GNU Lesser General Public License v3.0
      0000Updated Jul 17, 2018Jul 17, 2018
    • RIP-MD

      Public
      HTML
      51320Updated Jun 26, 2018Jun 26, 2018
    • Jupyter Notebook
      0000Updated Apr 26, 2018Apr 26, 2018
    • models

      Public
      Rule-Based Models
      GNU General Public License v3.0
      0000Updated Sep 9, 2017Sep 9, 2017
    • pleiades

      Public
      Developed software and relative work Ph.D. project "Rule-Based Models written in Kappa Language for Biological Processes"
      Python
      GNU General Public License v3.0
      0000Updated Aug 21, 2017Aug 21, 2017
    • Scripts of the Computational Biology Lab (DLab)
      Tcl
      2000Updated Mar 20, 2013Mar 20, 2013
    • expander

      Public
      expands prekappa syntax and creates a kappa file
      Python
      1210Updated Jan 6, 2012Jan 6, 2012