Merge pull request #68 from openworm/development #20

	name: Non OMV tests

	on:
	push:
	branches: [ master, development, experimental ]
	pull_request:
	branches: [ master, development, experimental ]

	jobs:
	build:

	runs-on: ubuntu-latest
	strategy:
	fail-fast: false
	matrix:
	python-version: [ 3.9 ]

	steps:
	- uses: actions/checkout@v4

	- name: Set up Python ${{ matrix.python-version }}
	uses: actions/setup-python@v5
	with:
	python-version: ${{ matrix.python-version }}

	- name: Install dependencies
	run: \|
	pip install pyNeuroML pytest

	- name: Run some examples
	run: \|
	echo "Running non OMV tests..."
	# Test analysis of channels using pynml-channelanalysis from PyNeuroML.
	cd ./NeuroML2/
	pynml-channelanalysis -temperature 34 -minV -55 -maxV 80 -duration 600 -clampBaseVoltage -55 -clampDuration 580 -stepTargetVoltage 10 -erev 50 -nogui ./ca_boyle.channel.nml
	pynml-channelanalysis -temperature 34 -minV -55 -maxV 80 -duration 600 -clampBaseVoltage -55 -clampDuration 580 -stepTargetVoltage 10 -erev -55 -nogui ./k_fast.channel.nml
	pynml-channelanalysis -temperature 34 -minV -55 -maxV 80 -duration 600 -clampBaseVoltage -55 -clampDuration 580 -stepTargetVoltage 10 -erev -55 -nogui ./k_slow.channel.nml

	#Testing individual shell scripts
	py.test shell_script_tester.py

	# Test Python version of Boyle & Cohen model
	cd ../BoyleCohen2008/PythonSupport/Main_Version
	python vclamp.py -nogui
	python vclamp_decimal.py -nogui
	python compareToNeuroML2.py

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