From 0571f05a88c7158e424cce42e357082c242dffff Mon Sep 17 00:00:00 2001 From: dorien-er Date: Wed, 11 Dec 2024 13:35:28 +0100 Subject: [PATCH 1/4] update memory label --- src/dataflow/split_h5mu/config.vsh.yaml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/src/dataflow/split_h5mu/config.vsh.yaml b/src/dataflow/split_h5mu/config.vsh.yaml index c085dc71281..405156eb92c 100644 --- a/src/dataflow/split_h5mu/config.vsh.yaml +++ b/src/dataflow/split_h5mu/config.vsh.yaml @@ -71,4 +71,4 @@ runners: - type: executable - type: nextflow directives: - label: [singlecpu, lowmem] + label: [singlecpu, highmem] From bab4ce5f84b9b926494f5bf36cac8b8b5c912278 Mon Sep 17 00:00:00 2001 From: dorien-er Date: Wed, 11 Dec 2024 13:36:53 +0100 Subject: [PATCH 2/4] update CHANGELOG --- CHANGELOG.md | 2 ++ 1 file changed, 2 insertions(+) diff --git a/CHANGELOG.md b/CHANGELOG.md index 9c7811a1f5d..39a6869923a 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -28,6 +28,8 @@ * `resources_test_scripts/scGPT.sh`: Update scGPT test resources to avoid subsetting of datasets (PR #926). +* `dataflow/split_h5mu`: Update memory label from `lowmem` to `highmem` (PR #930). + # openpipelines 2.0.0-rc.2 ## BUG FIXES From bfd0df38088a55d03a68d848814cdcf64fbd7129 Mon Sep 17 00:00:00 2001 From: Dorien <41797896+dorien-er@users.noreply.github.com> Date: Tue, 17 Dec 2024 17:27:28 +0100 Subject: [PATCH 3/4] Update src/dataflow/split_h5mu/config.vsh.yaml Co-authored-by: Dries Schaumont <5946712+DriesSchaumont@users.noreply.github.com> --- src/dataflow/split_h5mu/config.vsh.yaml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/src/dataflow/split_h5mu/config.vsh.yaml b/src/dataflow/split_h5mu/config.vsh.yaml index 405156eb92c..4da4eda4a9e 100644 --- a/src/dataflow/split_h5mu/config.vsh.yaml +++ b/src/dataflow/split_h5mu/config.vsh.yaml @@ -71,4 +71,4 @@ runners: - type: executable - type: nextflow directives: - label: [singlecpu, highmem] + label: [lowcpu, highmem] From 1acd71f34c30f8ea96e9dfa4d2238c50d48208a4 Mon Sep 17 00:00:00 2001 From: Dries Schaumont <5946712+DriesSchaumont@users.noreply.github.com> Date: Tue, 24 Dec 2024 13:43:16 +0100 Subject: [PATCH 4/4] Update CHANGELOG.md --- CHANGELOG.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index 39a6869923a..1c6f711018a 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -28,7 +28,7 @@ * `resources_test_scripts/scGPT.sh`: Update scGPT test resources to avoid subsetting of datasets (PR #926). -* `dataflow/split_h5mu`: Update memory label from `lowmem` to `highmem` (PR #930). +* `dataflow/split_h5mu`: Update memory label from `lowmem` to `highmem` and cpu label from `singlecpu` to `lowcpu` (PR #930). # openpipelines 2.0.0-rc.2