forked from igraph/igraph
-
Notifications
You must be signed in to change notification settings - Fork 0
/
.gitignore
511 lines (499 loc) · 15.9 KB
/
.gitignore
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
*~
.*.swp
*.pyc
*.so
*.lo
*.la
.dirstamp
.libs
.deps
/tags
/INSTALL
/VERSION
/aclocal.m4
/autom4te.cache
/build
/compile
/config.guess
/config.h
/config.h.in
/config.log
/config.status
/config.sub
/configure
/depcomp
/igraph.pc
/igraph_Info.plist
/install-sh
/libtool
/ltmain.sh
/missing
/stamp-h1
/ylwrap
/igraph.msvc
/fatbuild
/valgrind-testbed
/Makefile
/src/Makefile
/doc/Makefile
/Makefile.in
/src/Makefile.in
/doc/Makefile.in
/debian/Makefile
/debian/Makefile.in
/doc/Makefile
/doc/Makefile.in
/doc/book/Makefile
/doc/book/Makefile.in
/src/Makefile
/src/Makefile.in
/tests/Makefile
/tests/Makefile.in
/interfaces/Makefile
/interfaces/Makefile.in
/interfaces/R/Makefile
/interfaces/R/Makefile.in
/interfaces/R/object_files
/interfaces/R/version_number
/interfaces/shell/Makefile
/interfaces/shell/Makefile.in
/src/*.o
/src/AMD/Source/*.o
/src/COLAMD/Source/*.o
/src/CHOLMOD/*/*.o
/src/SuiteSparse_config/*.o
/src/cs/*.o
/src/f2c/*.o
/src/lapack/*.o
/src/plfit/*.o
/src/prpack/*.o
/optional/glpk/*.o
/optional/glpk/amd/*.o
/optional/glpk/colamd/*.o
/src/foreign-*-lexer.c
/src/foreign-*-parser.c
/src/foreign-*-parser.h
/include/igraph_version.h
/include/igraph_threading.h
/tests/atconfig
/tests/atlocal
/tests/package.m4
/tests/testsuite
/tests/testsuite.dir
/tests/testsuite.log
/interfaces/python/doc/api/*
/interfaces/python/doc/build/doctrees
/interfaces/python/doc/build/html
/interfaces/python/build
/interfaces/python/dist
/interfaces/python/python_igraph.egg-info
/interfaces/java/build
/interfaces/java/dist
/interfaces/java/history.xml
/interfaces/java/src/c/config.h
/interfaces/java/src/c/net_sf_igraph_Graph.c
/interfaces/java/src/c/net_sf_igraph_Graph.h
/interfaces/java/src/java/Graph.java
/interfaces/java/src/java/Connectedness.java
/interfaces/java/src/java/NeighborMode.java
/interfaces/java/src/java/StarMode.java
/interfaces/java/reports
/interfaces/java/autom4te.cache
/interfaces/java/configure
/interfaces/R/DESCRIPTION
/interfaces/R/igraph/autom4te.cache
/interfaces/R/configure
/interfaces/R/configure.in
/interfaces/R/src/Makevars.win
/interfaces/R/src/config.h.in
/interfaces/R/arpack/stamp
/interfaces/R/igraph_*.tar.gz
/interfaces/R/igraphdata_*.tar.gz
/interfaces/R/igraph/src/
/interfaces/R/igraph/DESCRIPTION
/interfaces/R/igraph/NAMESPACE
/interfaces/R/igraph/config.log
/interfaces/R/igraph/config.status
/interfaces/R/igraph/configure
/interfaces/R/igraph/R/config.R
/interfaces/R/igraph/R/auto.R
/interfaces/R/igraph/src/*.cpp
/interfaces/R/igraph/src/*.c
/interfaces/R/igraph/src/*.cc
/interfaces/R/igraph/src/*.h
/interfaces/R/igraph/src/*.hh
/interfaces/R/igraph/src/*.pmt
/interfaces/R/igraph/src/Makevars
/interfaces/R/igraph/src/Makevars.in
/interfaces/R/igraph/src/Makevars.win
/interfaces/R/igraph/src/config.h.in
/interfaces/R/igraph/src/cs/UFconfig.h
/interfaces/R/igraph/src/cs/cs.h
/interfaces/R/igraph/src/dgetv0.f
/interfaces/R/igraph/src/dlaqrb.f
/interfaces/R/igraph/src/dmout.f
/interfaces/R/igraph/src/dnaitr.f
/interfaces/R/igraph/src/dnapps.f
/interfaces/R/igraph/src/dnaup2.f
/interfaces/R/igraph/src/dnaupd.f
/interfaces/R/igraph/src/dnconv.f
/interfaces/R/igraph/src/dneigh.f
/interfaces/R/igraph/src/dneupd.f
/interfaces/R/igraph/src/dngets.f
/interfaces/R/igraph/src/dsaitr.f
/interfaces/R/igraph/src/dsapps.f
/interfaces/R/igraph/src/dsaup2.f
/interfaces/R/igraph/src/dsaupd.f
/interfaces/R/igraph/src/dsconv.f
/interfaces/R/igraph/src/dseigt.f
/interfaces/R/igraph/src/dsesrt.f
/interfaces/R/igraph/src/dseupd.f
/interfaces/R/igraph/src/dsgets.f
/interfaces/R/igraph/src/dsortc.f
/interfaces/R/igraph/src/dsortr.f
/interfaces/R/igraph/src/dstatn.f
/interfaces/R/igraph/src/dstats.f
/interfaces/R/igraph/src/dstqrb.f
/interfaces/R/igraph/src/dvout.f
/interfaces/R/igraph/src/ivout.f
/interfaces/R/igraph/src/second.f
/interfaces/R/igraph/configure.in
/interfaces/R/igraph/src/glpk/glpapi.h
/interfaces/R/igraph/src/glpk/glpavl.h
/interfaces/R/igraph/src/glpk/glpbfd.h
/interfaces/R/igraph/src/glpk/glpbfx.h
/interfaces/R/igraph/src/glpk/glpdmp.h
/interfaces/R/igraph/src/glpk/glpenv.h
/interfaces/R/igraph/src/glpk/glpfhv.h
/interfaces/R/igraph/src/glpk/glpgmp.h
/interfaces/R/igraph/src/glpk/glphbm.h
/interfaces/R/igraph/src/glpk/glpios.h
/interfaces/R/igraph/src/glpk/glpipm.h
/interfaces/R/igraph/src/glpk/glpk.h
/interfaces/R/igraph/src/glpk/glplib.h
/interfaces/R/igraph/src/glpk/glplpf.h
/interfaces/R/igraph/src/glpk/glpluf.h
/interfaces/R/igraph/src/glpk/glplux.h
/interfaces/R/igraph/src/glpk/glpmat.h
/interfaces/R/igraph/src/glpk/glpmpl.h
/interfaces/R/igraph/src/glpk/glpnet.h
/interfaces/R/igraph/src/glpk/glpnpp.h
/interfaces/R/igraph/src/glpk/glpqmd.h
/interfaces/R/igraph/src/glpk/glprgr.h
/interfaces/R/igraph/src/glpk/glprng.h
/interfaces/R/igraph/src/glpk/glpscf.h
/interfaces/R/igraph/src/glpk/glpspm.h
/interfaces/R/igraph/src/glpk/glpspx.h
/interfaces/R/igraph/src/glpk/glpsql.h
/interfaces/R/igraph/src/glpk/glpssx.h
/interfaces/R/igraph/src/glpk/glpstd.h
/interfaces/R/igraph/src/glpk/glptsp.h
/interfaces/R/igraph/src/glpk/amd/amd.h
/interfaces/R/igraph/src/glpk/amd/amd_internal.h
/interfaces/R/igraph/src/glpk/colamd/colamd.h
/examples/simple/2wheap.c.xml
/examples/simple/adjlist.c.xml
/examples/simple/assortativity.c.xml
/examples/simple/bellman_ford.c.xml
/examples/simple/biguint.c.xml
/examples/simple/biguint_betweenness.c.xml
/examples/simple/blas.c.xml
/examples/simple/cattributes.c.xml
/examples/simple/cattributes2.c.xml
/examples/simple/cattributes3.c.xml
/examples/simple/cattributes4.c.xml
/examples/simple/centralization.c.xml
/examples/simple/cohesive_blocks.c.xml
/examples/simple/d_indheap.c.xml
/examples/simple/dijkstra.c.xml
/examples/simple/dominator_tree.c.xml
/examples/simple/dot.c.xml
/examples/simple/dqueue.c.xml
/examples/simple/eigenvector_centrality.c.xml
/examples/simple/even_tarjan.c.xml
/examples/simple/flow.c.xml
/examples/simple/flow2.c.xml
/examples/simple/foreign.c.xml
/examples/simple/gml.c.xml
/examples/simple/graphml.c.xml
/examples/simple/heap.c.xml
/examples/simple/igraph_add_edges.c.xml
/examples/simple/igraph_add_vertices.c.xml
/examples/simple/igraph_adjacency.c.xml
/examples/simple/igraph_all_st_cuts.c.xml
/examples/simple/igraph_all_st_mincuts.c.xml
/examples/simple/igraph_are_connected.c.xml
/examples/simple/igraph_array.c.xml
/examples/simple/igraph_atlas.c.xml
/examples/simple/igraph_average_path_length.c.xml
/examples/simple/igraph_barabasi_game.c.xml
/examples/simple/igraph_barabasi_game2.c.xml
/examples/simple/igraph_betweenness.c.xml
/examples/simple/igraph_bfs.c.xml
/examples/simple/igraph_bfs2.c.xml
/examples/simple/igraph_biconnected_components.c.xml
/examples/simple/igraph_bipartite_create.c.xml
/examples/simple/igraph_bipartite_projection.c.xml
/examples/simple/igraph_cliques.c.xml
/examples/simple/igraph_cocitation.c.xml
/examples/simple/igraph_community_edge_betweenness.c.xml
/examples/simple/igraph_community_fastgreedy.c.xml
/examples/simple/igraph_community_label_propagation.c.xml
/examples/simple/igraph_community_leading_eigenvector.c.xml
/examples/simple/igraph_community_multilevel.c.xml
/examples/simple/igraph_community_optimal_modularity.c.xml
/examples/simple/igraph_complementer.c.xml
/examples/simple/igraph_complex.c.xml
/examples/simple/igraph_compose.c.xml
/examples/simple/igraph_convergence_degree.c.xml
/examples/simple/igraph_convex_hull.c.xml
/examples/simple/igraph_copy.c.xml
/examples/simple/igraph_create.c.xml
/examples/simple/igraph_decompose.c.xml
/examples/simple/igraph_degree.c.xml
/examples/simple/igraph_degree_sequence_game.c.xml
/examples/simple/igraph_delete_edges.c.xml
/examples/simple/igraph_delete_vertices.c.xml
/examples/simple/igraph_diameter.c.xml
/examples/simple/igraph_difference.c.xml
/examples/simple/igraph_disjoint_union.c.xml
/examples/simple/igraph_eccentricity.c.xml
/examples/simple/igraph_edge_betweenness.c.xml
/examples/simple/igraph_eigen_matrix_symmetric.c.xml
/examples/simple/igraph_empty.c.xml
/examples/simple/igraph_erdos_renyi_game.c.xml
/examples/simple/igraph_es_adj.c.xml
/examples/simple/igraph_es_fromto.c.xml
/examples/simple/igraph_es_pairs.c.xml
/examples/simple/igraph_es_path.c.xml
/examples/simple/igraph_feedback_arc_set.c.xml
/examples/simple/igraph_feedback_arc_set_ip.c.xml
/examples/simple/igraph_fisher_yates_shuffle.c.xml
/examples/simple/igraph_full.c.xml
/examples/simple/igraph_get_all_shortest_paths_dijkstra.c.xml
/examples/simple/igraph_get_eid.c.xml
/examples/simple/igraph_get_eids.c.xml
/examples/simple/igraph_get_shortest_paths.c.xml
/examples/simple/igraph_get_shortest_paths_dijkstra.c.xml
/examples/simple/igraph_girth.c.xml
/examples/simple/igraph_grg_game.c.xml
/examples/simple/igraph_growing_random_game.c.xml
/examples/simple/igraph_has_multiple.c.xml
/examples/simple/igraph_hashtable.c.xml
/examples/simple/igraph_hrg.c.xml
/examples/simple/igraph_hrg2.c.xml
/examples/simple/igraph_hrg3.c.xml
/examples/simple/igraph_i_cutheap.c.xml
/examples/simple/igraph_i_layout_sphere.c.xml
/examples/simple/igraph_independent_sets.c.xml
/examples/simple/igraph_induced_subgraph_map.c.xml
/examples/simple/igraph_intersection.c.xml
/examples/simple/igraph_is_directed.c.xml
/examples/simple/igraph_is_loop.c.xml
/examples/simple/igraph_is_minimal_separator.c.xml
/examples/simple/igraph_is_multiple.c.xml
/examples/simple/igraph_is_separator.c.xml
/examples/simple/igraph_isomorphic_vf2.c.xml
/examples/simple/igraph_knn.c.xml
/examples/simple/igraph_lapack_dgeev.c.xml
/examples/simple/igraph_lapack_dgeevx.c.xml
/examples/simple/igraph_lapack_dgesv.c.xml
/examples/simple/igraph_lapack_dsyevr.c.xml
/examples/simple/igraph_laplacian.c.xml
/examples/simple/igraph_lattice.c.xml
/examples/simple/igraph_layout_grid.c.xml
/examples/simple/igraph_layout_lgl.c.xml
/examples/simple/igraph_layout_mds.c.xml
/examples/simple/igraph_layout_merge.c.xml
/examples/simple/igraph_layout_reingold_tilford.c.xml
/examples/simple/igraph_layout_sugiyama.c.xml
/examples/simple/igraph_lcf.c.xml
/examples/simple/igraph_local_transitivity.c.xml
/examples/simple/igraph_marked_queue.c.xml
/examples/simple/igraph_maximal_cliques.c.xml
/examples/simple/igraph_mincut.c.xml
/examples/simple/igraph_minimal_separators.c.xml
/examples/simple/igraph_minimum_size_separators.c.xml
/examples/simple/igraph_minimum_spanning_tree.c.xml
/examples/simple/igraph_moran_process.c.xml
/examples/simple/igraph_motifs_randesu.c.xml
/examples/simple/igraph_neighbors.c.xml
/examples/simple/igraph_pagerank.c.xml
/examples/simple/igraph_preference_game.c.xml
/examples/simple/igraph_psumtree.c.xml
/examples/simple/igraph_radius.c.xml
/examples/simple/igraph_random_sample.c.xml
/examples/simple/igraph_read_graph_dl.c.xml
/examples/simple/igraph_read_graph_graphdb.c.xml
/examples/simple/igraph_read_graph_lgl.c.xml
/examples/simple/igraph_reciprocity.c.xml
/examples/simple/igraph_rewire.c.xml
/examples/simple/igraph_ring.c.xml
/examples/simple/igraph_roulette_wheel_imitation.c.xml
/examples/simple/igraph_set.c.xml
/examples/simple/igraph_similarity.c.xml
/examples/simple/igraph_simplify.c.xml
/examples/simple/igraph_small.c.xml
/examples/simple/igraph_sparsemat.c.xml
/examples/simple/igraph_sparsemat2.c.xml
/examples/simple/igraph_sparsemat3.c.xml
/examples/simple/igraph_sparsemat4.c.xml
/examples/simple/igraph_sparsemat5.c.xml
/examples/simple/igraph_sparsemat6.c.xml
/examples/simple/igraph_sparsemat7.c.xml
/examples/simple/igraph_sparsemat8.c.xml
/examples/simple/igraph_star.c.xml
/examples/simple/igraph_stochastic_imitation.c.xml
/examples/simple/igraph_strvector.c.xml
/examples/simple/igraph_to_undirected.c.xml
/examples/simple/igraph_topological_sorting.c.xml
/examples/simple/igraph_transitive_closure_dag.c.xml
/examples/simple/igraph_transitivity.c.xml
/examples/simple/igraph_tree.c.xml
/examples/simple/igraph_trie.c.xml
/examples/simple/igraph_union.c.xml
/examples/simple/igraph_version.c.xml
/examples/simple/igraph_vs_nonadj.c.xml
/examples/simple/igraph_vs_seq.c.xml
/examples/simple/igraph_vs_vector.c.xml
/examples/simple/igraph_weighted_adjacency.c.xml
/examples/simple/igraph_write_graph_leda.c.xml
/examples/simple/igraph_write_graph_lgl.c.xml
/examples/simple/igraph_write_graph_pajek.c.xml
/examples/simple/indheap.c.xml
/examples/simple/lineendings.c.xml
/examples/simple/matrix.c.xml
/examples/simple/matrix2.c.xml
/examples/simple/mt.c.xml
/examples/simple/pajek.c.xml
/examples/simple/random_seed.c.xml
/examples/simple/single_target_shortest_path.c.xml
/examples/simple/spinglass.c.xml
/examples/simple/spmatrix.c.xml
/examples/simple/stack.c.xml
/examples/simple/topology.c.xml
/examples/simple/vector.c.xml
/examples/simple/vector2.c.xml
/examples/simple/vector_ptr.c.xml
/examples/simple/walktrap.c.xml
/examples/simple/watts_strogatz_game.c.xml
/examples/simple/igraph_community_infomap.c.xml
/examples/simple/igraph_deterministic_optimal_imitation.c.xml
/examples/simple/VF2-compat.c.xml
/examples/simple/bug-1033045.c.xml
/examples/simple/bug-1149658.c.xml
/examples/simple/igraph_arpack_rnsolve.c.xml
/examples/simple/igraph_community_leading_eigenvector2.c.xml
/examples/simple/igraph_eigen_matrix.c.xml
/examples/simple/igraph_eigen_matrix2.c.xml
/examples/simple/igraph_eigen_matrix3.c.xml
/examples/simple/igraph_eigen_matrix4.c.xml
/examples/simple/igraph_eigen_matrix_symmetric_arpack.c.xml
/examples/simple/igraph_get_shortest_paths2.c.xml
/examples/simple/igraph_is_degree_sequence.c.xml
/examples/simple/igraph_k_regular_game.c.xml
/examples/simple/igraph_lapack_dgehrd.c.xml
/examples/simple/igraph_layout_merge2.c.xml
/examples/simple/igraph_layout_merge3.c.xml
/examples/simple/igraph_maximal_cliques0.c
/examples/simple/igraph_maximal_cliques0.c.xml
/examples/simple/igraph_maximal_cliques2.c.xml
/examples/simple/igraph_maximal_cliques3.c.xml
/examples/simple/igraph_maximum_bipartite_matching.c.xml
/examples/simple/igraph_power_law_fit.c.xml
/examples/simple/igraph_qsort.c.xml
/examples/simple/igraph_qsort_r.c.xml
/examples/simple/igraph_rng_get_exp.c.xml
/examples/simple/igraph_scg_grouping.c.xml
/examples/simple/igraph_scg_grouping2.c.xml
/examples/simple/igraph_scg_grouping3.c.xml
/examples/simple/igraph_scg_grouping4.c.xml
/examples/simple/igraph_scg_semiprojectors.c.xml
/examples/simple/igraph_scg_semiprojectors2.c.xml
/examples/simple/igraph_scg_semiprojectors3.c.xml
/examples/simple/igraph_sparsemat9.c.xml
/examples/simple/igraph_sparsemat_is_symmetric.c.xml
/examples/simple/igraph_subisomorphic_lad.c.xml
/examples/simple/levc-stress.c.xml
/examples/simple/matrix3.c.xml
/examples/simple/pajek2.c.xml
/examples/simple/pajek_bipartite.c.xml
/examples/simple/pajek_bipartite2.c.xml
/examples/simple/pajek_signed.c.xml
/examples/simple/scg.c.xml
/examples/simple/scg2.c.xml
/examples/simple/scg3.c.xml
/examples/simple/tls1.c.xml
/examples/simple/tls2.c.xml
/examples/simple/vector3.c.xml
/examples/simple/igraph_gomory_hu_tree.c.xml
/examples/simple/igraph_intersection2.c.xml
/examples/simple/igraph_maximal_cliques4.c.xml
/doc/html/stamp
/doc/tags
/doc/adjlist.xml
/doc/arpack.xml
/doc/attributes.xml
/doc/basicigraph.xml
/doc/bipartite.xml
/doc/cliques.xml
/doc/community.xml
/doc/dqueue.xml
/doc/error.xml
/doc/flows.xml
/doc/foreign.xml
/doc/generators.xml
/doc/heap.xml
/doc/hrg.xml
/doc/isomorphism.xml
/doc/iterators.xml
/doc/layout.xml
/doc/matrix.xml
/doc/memory.xml
/doc/motifs.xml
/doc/nongraph.xml
/doc/operators.xml
/doc/random.xml
/doc/separators.xml
/doc/sparsemat.xml
/doc/sparsematrix.xml
/doc/stack.xml
/doc/structural.xml
/doc/strvector.xml
/doc/vector.xml
/doc/visitors.xml
/doc/spatialgames.xml
/doc/progress.xml
/doc/scg.xml
/doc/status.xml
/doc/threading.xml
/doc/graphlets.xml
/doc/tutorial-info.xml
/doc/igraph-docs-info.xml
/doc/igraph-docs-info2.xml
/doc/igraph-docs-info3.xml
/doc/igraph-docs-info4.xml
/doc/igraph-docs.fo
/doc/igraph-docs.pdf
/doc/igraph-docs2.xml
/doc/igraph-docs3.xml
/doc/igraph-docs4.xml
/doc/igraph.info
/doc/igraph.info.orig
/doc/igraph.texi
/doc/igraph.txml
/doc/html/*.html
/doc/jekyll
/nexus/cgi-bin/.openid_secret_key
/nexus/sessions/*
/nexus/config/emailpass
/nexus/config/Rscript
/nexus/data/*
/www/_site
/www/_includes/igraph-rversion
/www/_includes/igraph-version
/www/r/doc/
/www/c/doc/
/www/python/doc/
/www/stamp
/interfaces/R/igraph/man/*.Rd