diff --git a/CHANGELOG.md b/CHANGELOG.md index 714cf14..e6c3e70 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -3,6 +3,10 @@ The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/) and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html). +## v1.1.0 - September 24th, 2024 (Mus caroli) + +Expanded the pattern matching chromosome contigs to `^(CM|CP|FR|L[R-T]|O[U-Z])`. + ## v1.0.0 - September 20th, 2024 (Orang Outan) Initial release of oist/LuscombeU_stlpreprocess, created with the [nf-core](https://nf-co.re/) template. diff --git a/README.md b/README.md index 9f541bf..d004edc 100644 --- a/README.md +++ b/README.md @@ -12,9 +12,11 @@ ## TODO - Some assemblies only contain fragmented condigs of the mitochondrial genome. - Filter them out. In `GCA_000146795` they match `Contig` and `>AD` while - complete Primate mitogenomes do not (`>CM`, `>CP`, `>J0`, `>KT`, `>LN`). - + Filter them out. + - In `GCA_000146795` they match `Contig` and `>AD` while + complete Primate mitogenomes do not (`>CM`, `>CP`, `>J0`, `>KT`, `>LN`). + - In `GCA_015711505` they match `HiC_scaffold` and `>JA` while + complete Glire mitogenomes do not (`>AA`, `>AY`, `>CM`, `>JA`, `>LR`, `>OR`, `>OW`, `>OX`, `>OY`, `>OZ`). - Take TSV as input instead of CSV. With or without header? ## Usage