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{file = "ipython-8.14.0-py3-none-any.whl", hash = "sha256:248aca623f5c99a6635bc3857677b7320b9b8039f99f070ee0d20a5ca5a8e6bf"}, - {file = "ipython-8.14.0.tar.gz", hash = "sha256:1d197b907b6ba441b692c48cf2a3a2de280dc0ac91a3405b39349a50272ca0a1"}, + {file = "ipython-8.15.0-py3-none-any.whl", hash = "sha256:45a2c3a529296870a97b7de34eda4a31bee16bc7bf954e07d39abe49caf8f887"}, + {file = "ipython-8.15.0.tar.gz", hash = "sha256:2baeb5be6949eeebf532150f81746f8333e2ccce02de1c7eedde3f23ed5e9f1e"}, ] [package.dependencies] @@ -372,6 +354,7 @@ appnope = {version = "*", markers = "sys_platform == \"darwin\""} backcall = "*" colorama = {version = "*", markers = "sys_platform == \"win32\""} decorator = "*" +exceptiongroup = {version = "*", markers = "python_version < \"3.11\""} jedi = ">=0.16" matplotlib-inline = "*" pexpect = {version = ">4.3", markers = "sys_platform != \"win32\""} @@ -383,9 +366,9 @@ traitlets = ">=5" typing-extensions = {version = "*", markers = "python_version < \"3.10\""} [package.extras] -all = ["black", "curio", "docrepr", "ipykernel", "ipyparallel", "ipywidgets", "matplotlib", "matplotlib (!=3.2.0)", "nbconvert", "nbformat", "notebook", "numpy (>=1.21)", "pandas", "pytest (<7)", "pytest (<7.1)", "pytest-asyncio", "qtconsole", "setuptools (>=18.5)", "sphinx (>=1.3)", "sphinx-rtd-theme", "stack-data", "testpath", "trio", "typing-extensions"] +all = ["black", "curio", "docrepr", "exceptiongroup", "ipykernel", "ipyparallel", "ipywidgets", "matplotlib", "matplotlib (!=3.2.0)", "nbconvert", "nbformat", "notebook", "numpy (>=1.21)", "pandas", "pytest (<7)", "pytest (<7.1)", "pytest-asyncio", "qtconsole", "setuptools (>=18.5)", "sphinx (>=1.3)", "sphinx-rtd-theme", "stack-data", "testpath", "trio", "typing-extensions"] black = ["black"] -doc = ["docrepr", "ipykernel", "matplotlib", "pytest (<7)", "pytest (<7.1)", "pytest-asyncio", "setuptools (>=18.5)", "sphinx (>=1.3)", "sphinx-rtd-theme", "stack-data", "testpath", "typing-extensions"] +doc = ["docrepr", "exceptiongroup", "ipykernel", "matplotlib", "pytest (<7)", "pytest (<7.1)", "pytest-asyncio", "setuptools (>=18.5)", "sphinx (>=1.3)", "sphinx-rtd-theme", "stack-data", "testpath", "typing-extensions"] kernel = ["ipykernel"] nbconvert = ["nbconvert"] nbformat = ["nbformat"] @@ -399,7 +382,6 @@ test-extra = ["curio", "matplotlib (!=3.2.0)", "nbformat", "numpy (>=1.21)", "pa name = "jedi" version = "0.19.0" description = "An autocompletion tool for Python that can be used for text editors." -category = "dev" optional = false python-versions = ">=3.6" files = [ @@ -419,7 +401,6 @@ testing = ["Django (<3.1)", "attrs", "colorama", "docopt", "pytest (<7.0.0)"] name = "matplotlib-inline" version = "0.1.6" description = "Inline Matplotlib backend for Jupyter" -category = "dev" optional = false python-versions = ">=3.5" files = [ @@ -434,7 +415,6 @@ traitlets = "*" name = "mypy-extensions" version = "1.0.0" description = "Type system extensions for programs checked with the mypy type checker." -category = "dev" optional = false python-versions = ">=3.5" files = [ @@ -446,7 +426,6 @@ files = [ name = "packaging" version = "23.1" description = "Core utilities for Python packages" -category = "main" optional = false python-versions = ">=3.7" files = [ @@ -458,7 +437,6 @@ files = [ name = "parso" version = "0.8.3" description = "A Python Parser" -category = "dev" optional = false python-versions = ">=3.6" files = [ @@ -474,7 +452,6 @@ testing = ["docopt", "pytest (<6.0.0)"] name = "pathspec" version = "0.11.2" description = "Utility library for gitignore style pattern matching of file paths." -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -486,7 +463,6 @@ files = [ name = "pexpect" version = "4.8.0" description = "Pexpect allows easy control of interactive console applications." -category = "dev" optional = false python-versions = "*" files = [ @@ -501,7 +477,6 @@ ptyprocess = ">=0.5" name = "pickleshare" version = "0.7.5" description = "Tiny 'shelve'-like database with concurrency support" -category = "dev" optional = false python-versions = "*" files = [ @@ -513,7 +488,6 @@ files = [ name = "platformdirs" version = "3.10.0" description = "A small Python package for determining appropriate platform-specific dirs, e.g. a \"user data dir\"." -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -527,14 +501,13 @@ test = ["appdirs (==1.4.4)", "covdefaults (>=2.3)", "pytest (>=7.4)", "pytest-co [[package]] name = "pluggy" -version = "1.2.0" +version = "1.3.0" description = "plugin and hook calling mechanisms for python" -category = "main" optional = false -python-versions = ">=3.7" +python-versions = ">=3.8" files = [ - {file = "pluggy-1.2.0-py3-none-any.whl", hash = "sha256:c2fd55a7d7a3863cba1a013e4e2414658b1d07b6bc57b3919e0c63c9abb99849"}, - {file = "pluggy-1.2.0.tar.gz", hash = "sha256:d12f0c4b579b15f5e054301bb226ee85eeeba08ffec228092f8defbaa3a4c4b3"}, + {file = "pluggy-1.3.0-py3-none-any.whl", hash = "sha256:d89c696a773f8bd377d18e5ecda92b7a3793cbe66c87060a6fb58c7b6e1061f7"}, + {file = "pluggy-1.3.0.tar.gz", hash = "sha256:cf61ae8f126ac6f7c451172cf30e3e43d3ca77615509771b3a984a0730651e12"}, ] [package.extras] @@ -545,7 +518,6 @@ testing = ["pytest", "pytest-benchmark"] name = "prompt-toolkit" version = "3.0.39" description = "Library for building powerful interactive command lines in Python" -category = "dev" optional = false python-versions = ">=3.7.0" files = [ @@ -560,7 +532,6 @@ wcwidth = "*" name = "ptyprocess" version = "0.7.0" description = "Run a subprocess in a pseudo terminal" -category = "dev" optional = false python-versions = "*" files = [ @@ -572,7 +543,6 @@ files = [ name = "pure-eval" version = "0.2.2" description = "Safely evaluate AST nodes without side effects" -category = "dev" optional = false python-versions = "*" files = [ @@ -587,7 +557,6 @@ tests = ["pytest"] name = "pydantic" version = "1.10.12" description = "Data validation and settings management using python type hints" -category = "main" optional = false python-versions = ">=3.7" files = [ @@ -640,7 +609,6 @@ email = ["email-validator (>=1.0.3)"] name = "pygments" version = "2.16.1" description = "Pygments is a syntax highlighting package written in Python." -category = "dev" optional = false python-versions = ">=3.7" files = [ @@ -653,14 +621,13 @@ plugins = ["importlib-metadata"] [[package]] name = "pytest" -version = "7.4.0" +version = "7.4.2" description = "pytest: simple powerful testing with Python" -category = "main" optional = false python-versions = ">=3.7" files = [ - {file = "pytest-7.4.0-py3-none-any.whl", hash = "sha256:78bf16451a2eb8c7a2ea98e32dc119fd2aa758f1d5d66dbf0a59d69a3969df32"}, - {file = "pytest-7.4.0.tar.gz", hash = "sha256:b4bf8c45bd59934ed84001ad51e11b4ee40d40a1229d2c79f9c592b0a3f6bd8a"}, + {file = "pytest-7.4.2-py3-none-any.whl", hash = "sha256:1d881c6124e08ff0a1bb75ba3ec0bfd8b5354a01c194ddd5a0a870a48d99b002"}, + {file = "pytest-7.4.2.tar.gz", hash = "sha256:a766259cfab564a2ad52cb1aae1b881a75c3eb7e34ca3779697c23ed47c47069"}, ] [package.dependencies] @@ -678,7 +645,6 @@ testing = ["argcomplete", "attrs (>=19.2.0)", "hypothesis (>=3.56)", "mock", "no name = "requests" version = "2.31.0" description = "Python HTTP for Humans." -category = "main" optional = false python-versions = ">=3.7" files = [ @@ -700,7 +666,6 @@ use-chardet-on-py3 = ["chardet (>=3.0.2,<6)"] name = "six" version = "1.16.0" description = "Python 2 and 3 compatibility utilities" -category = "dev" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*" files = [ @@ -712,7 +677,6 @@ files = [ name = "sniffio" version = "1.3.0" description = "Sniff out which async library your code is running under" -category = "main" optional = false python-versions = ">=3.7" files = [ @@ -724,7 +688,6 @@ files = [ name = "stack-data" version = "0.6.2" description = "Extract data from python stack frames and tracebacks for informative displays" -category = "dev" optional = false python-versions = "*" files = [ @@ -744,7 +707,6 @@ tests = ["cython", "littleutils", "pygments", "pytest", "typeguard"] name = "starlette" version = "0.27.0" description = "The little ASGI library that shines." -category = "main" optional = false python-versions = ">=3.7" files = [ @@ -763,7 +725,6 @@ full = ["httpx (>=0.22.0)", "itsdangerous", "jinja2", "python-multipart", "pyyam name = "tomli" version = "2.0.1" description = "A lil' TOML parser" -category = "main" optional = false python-versions = ">=3.7" files = [ @@ -773,42 +734,39 @@ files = [ [[package]] name = "traitlets" -version = "5.9.0" +version = "5.10.0" description = "Traitlets Python configuration system" -category = "dev" optional = false -python-versions = ">=3.7" +python-versions = ">=3.8" files = [ - {file = "traitlets-5.9.0-py3-none-any.whl", hash = "sha256:9e6ec080259b9a5940c797d58b613b5e31441c2257b87c2e795c5228ae80d2d8"}, - {file = "traitlets-5.9.0.tar.gz", hash = "sha256:f6cde21a9c68cf756af02035f72d5a723bf607e862e7be33ece505abf4a3bad9"}, + {file = "traitlets-5.10.0-py3-none-any.whl", hash = "sha256:417745a96681fbb358e723d5346a547521f36e9bd0d50ba7ab368fff5d67aa54"}, + {file = "traitlets-5.10.0.tar.gz", hash = "sha256:f584ea209240466e66e91f3c81aa7d004ba4cf794990b0c775938a1544217cd1"}, ] [package.extras] docs = ["myst-parser", "pydata-sphinx-theme", "sphinx"] -test = ["argcomplete (>=2.0)", "pre-commit", "pytest", "pytest-mock"] +test = ["argcomplete (>=3.0.3)", "mypy (>=1.5.1)", "pre-commit", "pytest (>=7.0,<7.5)", "pytest-mock", "pytest-mypy-testing"] [[package]] name = "typing-extensions" -version = "4.7.1" -description = "Backported and Experimental Type Hints for Python 3.7+" -category = "main" +version = "4.8.0" +description = "Backported and Experimental Type Hints for Python 3.8+" optional = false -python-versions = ">=3.7" +python-versions = ">=3.8" files = [ - {file = "typing_extensions-4.7.1-py3-none-any.whl", hash = "sha256:440d5dd3af93b060174bf433bccd69b0babc3b15b1a8dca43789fd7f61514b36"}, - {file = "typing_extensions-4.7.1.tar.gz", hash = "sha256:b75ddc264f0ba5615db7ba217daeb99701ad295353c45f9e95963337ceeeffb2"}, + {file = "typing_extensions-4.8.0-py3-none-any.whl", hash = "sha256:8f92fc8806f9a6b641eaa5318da32b44d401efaac0f6678c9bc448ba3605faa0"}, + {file = "typing_extensions-4.8.0.tar.gz", hash = "sha256:df8e4339e9cb77357558cbdbceca33c303714cf861d1eef15e1070055ae8b7ef"}, ] [[package]] name = "urllib3" -version = "2.0.4" +version = "2.0.5" description = "HTTP library with thread-safe connection pooling, file post, and more." -category = "main" optional = false python-versions = ">=3.7" files = [ - {file = "urllib3-2.0.4-py3-none-any.whl", hash = "sha256:de7df1803967d2c2a98e4b11bb7d6bd9210474c46e8a0401514e3a42a75ebde4"}, - {file = "urllib3-2.0.4.tar.gz", hash = "sha256:8d22f86aae8ef5e410d4f539fde9ce6b2113a001bb4d189e0aed70642d602b11"}, + {file = "urllib3-2.0.5-py3-none-any.whl", hash = "sha256:ef16afa8ba34a1f989db38e1dbbe0c302e4289a47856990d0682e374563ce35e"}, + {file = "urllib3-2.0.5.tar.gz", hash = "sha256:13abf37382ea2ce6fb744d4dad67838eec857c9f4f57009891805e0b5e123594"}, ] [package.extras] @@ -821,7 +779,6 @@ zstd = ["zstandard (>=0.18.0)"] name = "uvicorn" version = "0.22.0" description = "The lightning-fast ASGI server." -category = "main" optional = false python-versions = ">=3.7" files = [ @@ -840,7 +797,6 @@ standard = ["colorama (>=0.4)", "httptools (>=0.5.0)", "python-dotenv (>=0.13)", name = "wcwidth" version = "0.2.6" description = "Measures the displayed width of unicode strings in a terminal" -category = "dev" optional = false python-versions = "*" files = [ diff --git a/pyproject.toml b/pyproject.toml index aa8200b..d56332a 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -1,6 +1,6 @@ [tool.poetry] name = "metadata-refiner" -version = "1.2.1" +version = "1.2.2" description = "A service that refines metadata." authors = ["Thomas van Erven"] diff --git a/src/refiners/dataverse_nl_refiner.py b/src/refiners/dataverse_nl_refiner.py index cea63f2..e2b9453 100644 --- a/src/refiners/dataverse_nl_refiner.py +++ b/src/refiners/dataverse_nl_refiner.py @@ -1,5 +1,6 @@ import re +from refiners.cbs_refiner import get_field from utils import add_contact_email @@ -26,6 +27,8 @@ def refine_dataverse_nl_metadata(metadata: dict) -> dict: ) metadata['datasetVersion'] = dataset_version + refine_production_place_field(metadata) + return metadata @@ -55,3 +58,19 @@ def retrieve_license_name(license_string): elif re.search(r'10\.17026/fp39-0x58', license_string): dataset_lic = "DANS Licence" return dataset_lic + + +def refine_production_place_field(metadata): + metadataBlocks = metadata['datasetVersion']['metadataBlocks'] + if 'citation' in metadataBlocks: + citation_fields = metadataBlocks['citation']['fields'] + + prod_place_dict = get_field('productionPlace', citation_fields) + # Check if the 'prod_place_dict' exists and has the required structure. + if prod_place_dict and 'multiple' in prod_place_dict and 'value' in prod_place_dict: + + # Update the 'multiple' field to True. + prod_place_dict['multiple'] = True + + # Wrap the 'value' field in a list. + prod_place_dict['value'] = [prod_place_dict['value']] diff --git a/src/tests/test_dataverse_nl_refiner.py b/src/tests/test_dataverse_nl_refiner.py index 7dbec9a..f2e7691 100644 --- a/src/tests/test_dataverse_nl_refiner.py +++ b/src/tests/test_dataverse_nl_refiner.py @@ -1,5 +1,5 @@ from refiners.dataverse_nl_refiner import refine_dataverse_nl_metadata, \ - retrieve_license_name, format_license + retrieve_license_name, format_license, refine_production_place_field from utils import add_contact_email @@ -88,6 +88,12 @@ def test_refine_dataverse_nl_metadata(): { "typeName": "title", "value": "Example Dataset" + }, + { + 'typeName': 'productionPlace', + 'multiple': False, + 'typeClass': 'primitive', + 'value': 'Netherlands' } ] }, @@ -101,6 +107,10 @@ def test_refine_dataverse_nl_metadata(): assert "termsOfUse" not in refined_metadata["datasetVersion"] assert "termsOfAccess" not in refined_metadata["datasetVersion"] assert "license" not in refined_metadata["datasetVersion"] + assert metadata['datasetVersion']['metadataBlocks']['citation'][ + 'fields'][2]['multiple'], True + assert metadata['datasetVersion']['metadataBlocks']['citation'][ + 'fields'][2]['value'], ['Netherlands'] def test_add_contact_email(): @@ -152,3 +162,29 @@ def test_add_contact_email(): assert updated_metadata["datasetVersion"]["metadataBlocks"][ "citation"]["fields"][0]["value"][0]["datasetContactEmail"][ "value"] == contact_email + +def test_refine_production_place_field(): + # Create a sample metadata dictionary with 'productionPlace' field. + metadata = { + 'datasetVersion': { + 'metadataBlocks': { + 'citation': { + 'fields': [ + { + 'typeName': 'productionPlace', + 'multiple': False, + 'typeClass': 'primitive', + 'value': 'Netherlands' + } + ] + } + } + } + } + + # Call the function to refine the 'productionPlace' field. + refine_production_place_field(metadata) + + # Check if the field has been updated as expected. + assert metadata['datasetVersion']['metadataBlocks']['citation']['fields'][0]['multiple'], True + assert metadata['datasetVersion']['metadataBlocks']['citation']['fields'][0]['value'], ['Netherlands']