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Replace type definition for abbreviation synonyms #3082

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merged 10 commits into from
Oct 26, 2023
Merged

Replace type definition for abbreviation synonyms #3082

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af87363
Replace type definition for abbreviation synonyms
cthoyt Oct 1, 2023
1d60aba
Update uberon-edit.obo
cthoyt Oct 1, 2023
d4446fa
Merge branch 'master' into update-abbreviations
cthoyt Oct 12, 2023
40ee17d
Merge branch 'master' into update-abbreviations
cthoyt Oct 16, 2023
85b5753
update abbreviation annotation in sparql_test check
anitacaron Oct 16, 2023
c152fda
Merge branch 'master' into pr/cthoyt/3082
anitacaron Oct 26, 2023
01b5435
Merge branch 'master' into update-abbreviations
Oct 26, 2023
981aaca
normalize uberon-edit
anitacaron Oct 26, 2023
79bae49
remove `synonymtypedef: ABBREVIATION` in uberon-edit
anitacaron Oct 26, 2023
b18f33f
lower missing_synonymtype_declaration's severity to WARN
anitacaron Oct 26, 2023
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1 change: 0 additions & 1 deletion src/ontology/uberon-edit.obo
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Original file line number Diff line number Diff line change
Expand Up @@ -39,7 +39,6 @@ synonymtypedef: LATIN "latin term"
synonymtypedef: MISSPELLING "a mis-spelling that is in common use and thus recorded"
synonymtypedef: NON_AMNIOTE "synonym that is inappropriate for amniotes"
synonymtypedef: NON_MAMMAL "synonym that is inappropriate for mammals"
synonymtypedef: OMO:0003000 "abbreviation"
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synonymtypedef: PENDING_REVIEW "expert consultation and attribution required"
synonymtypedef: PLURAL "plural term"
synonymtypedef: SENSU "taxonomic disambiguation"
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