Changing contains to be location_of. See https://github.com/oborel/obo-relations/pull/739

[cmungall]

No description provided.

[anitacaron]

Related to

• Obsoleting contains and contained in 693 oborel/obo-relations#739

[anitacaron]

#gogoeditdiff

[anitacaron]

#gogoeditdiff

[github-actions]

Here's a diff of how these changes impact the classified ontology (on -simple file):

Ontology comparison

Left

• Ontology IRI: http://purl.obolibrary.org/obo/uberon/uberon-simple.owl
• Version IRI: http://purl.obolibrary.org/obo/uberon/releases/2023-09-04/uberon-simple.owl
• Loaded from: file:/work/src/ontology/../../master/src/ontology/uberon-simple.owl

Right

• Ontology IRI: http://purl.obolibrary.org/obo/uberon/uberon-simple.owl
• Version IRI: http://purl.obolibrary.org/obo/uberon/releases/2023-09-04/uberon-simple.owl
• Loaded from: file:/work/src/ontology/uberon-simple.owl

Ontology imports

Ontology annotations

amniotic cavity http://purl.obolibrary.org/obo/UBERON_0000301

Removed

• amniotic cavity SubClassOf contains some amniotic fluid

Added

• amniotic cavity SubClassOf location of some amniotic fluid

blood sinus of vibrissa http://purl.obolibrary.org/obo/UBERON_0034941

Removed

• blood sinus of vibrissa SubClassOf contains some blood

Added

• blood sinus of vibrissa SubClassOf has part some blood

epididymal lumen http://purl.obolibrary.org/obo/UBERON_0035956

Removed

• epididymal lumen SubClassOf contains some seminal fluid
  • source "FMA"

Added

• epididymal lumen SubClassOf location of some seminal fluid
  • source "FMA"

ovarian fossa http://purl.obolibrary.org/obo/UBERON_0016883

Removed

• ovarian fossa SubClassOf contains some ovary

Added

• ovarian fossa SubClassOf location of some ovary

pericardial cavity http://purl.obolibrary.org/obo/UBERON_0001074

Removed

• pericardial cavity SubClassOf contains some pericardial fluid

Added

• pericardial cavity SubClassOf location of some pericardial fluid

perivascular space http://purl.obolibrary.org/obo/UBERON_0014930

Removed

• perivascular space SubClassOf contains some cerebrospinal fluid

Added

• perivascular space SubClassOf location of some cerebrospinal fluid

pituitary fossa http://purl.obolibrary.org/obo/UBERON_0006667

Removed

• pituitary fossa SubClassOf contains some pituitary gland

Added

• pituitary fossa SubClassOf location of some pituitary gland

spermaceti organ http://purl.obolibrary.org/obo/UBERON_0009756

Removed

• spermaceti organ SubClassOf contains some spermaceti

Added

• spermaceti organ SubClassOf location of some spermaceti

subarachnoid space http://purl.obolibrary.org/obo/UBERON_0000315

Removed

• subarachnoid space SubClassOf contains some blood vessel

  • source "ISBN:0471888893"

• subarachnoid space SubClassOf contains some cerebrospinal fluid

Added

• subarachnoid space SubClassOf location of some blood vessel

  • source "ISBN:0471888893"

• subarachnoid space SubClassOf location of some cerebrospinal fluid

[github-actions]

Here's a diff of your edit file (unreasoned)

Ontology comparison

Left

• Ontology IRI: http://purl.obolibrary.org/obo/uberon/core.owl
• Version IRI: None
• Loaded from: file:/work/src/ontology/../../master/src/ontology/uberon-edit.obo

Right

• Ontology IRI: http://purl.obolibrary.org/obo/uberon/core.owl
• Version IRI: None
• Loaded from: file:/work/src/ontology/uberon-edit.obo

Ontology imports

Ontology annotations

amniotic cavity http://purl.obolibrary.org/obo/UBERON_0000301

Removed

• amniotic cavity SubClassOf contains some amniotic fluid

Added

• amniotic cavity SubClassOf location of some amniotic fluid

blood sinus of vibrissa http://purl.obolibrary.org/obo/UBERON_0034941

Removed

• blood sinus of vibrissa SubClassOf contains some blood

Added

• blood sinus of vibrissa SubClassOf has part some blood

epididymal lumen http://purl.obolibrary.org/obo/UBERON_0035956

Removed

• epididymal lumen SubClassOf contains some seminal fluid
  • source "FMA"^^string

Added

• epididymal lumen SubClassOf location of some seminal fluid
  • source "FMA"^^string

ovarian fossa http://purl.obolibrary.org/obo/UBERON_0016883

Removed

• ovarian fossa SubClassOf contains some ovary

Added

• ovarian fossa SubClassOf location of some ovary

pericardial cavity http://purl.obolibrary.org/obo/UBERON_0001074

Removed

• pericardial cavity SubClassOf contains some pericardial fluid

Added

• pericardial cavity SubClassOf location of some pericardial fluid

perivascular space http://purl.obolibrary.org/obo/UBERON_0014930

Removed

• perivascular space SubClassOf contains some cerebrospinal fluid

Added

• perivascular space SubClassOf location of some cerebrospinal fluid

pituitary fossa http://purl.obolibrary.org/obo/UBERON_0006667

Removed

• pituitary fossa SubClassOf contains some pituitary gland

Added

• pituitary fossa SubClassOf location of some pituitary gland

spermaceti organ http://purl.obolibrary.org/obo/UBERON_0009756

Removed

• spermaceti organ EquivalentTo organ and (contains some spermaceti)

Added

• spermaceti organ EquivalentTo organ and (location of some spermaceti)

subarachnoid space http://purl.obolibrary.org/obo/UBERON_0000315

Removed

• subarachnoid space SubClassOf contains some blood vessel

  • source "ISBN:0471888893"^^string

• subarachnoid space SubClassOf contains some cerebrospinal fluid

Added

• subarachnoid space SubClassOf location of some blood vessel

  • source "ISBN:0471888893"^^string

• subarachnoid space SubClassOf location of some cerebrospinal fluid