From 905e79046a733250b088e8a410bd73d98e9960b8 Mon Sep 17 00:00:00 2001 From: Damien Goutte-Gattat Date: Sun, 10 Sep 2023 10:42:44 +0100 Subject: [PATCH] Use the latest version of the SSSOM plugin. There are some cases in Uberon where a same foreign term is referenced in two xref annotations: one on a valid Uberon term, and one on a deprecated Uberon term (the latter should probably have been removed when the term was deprecated, but his has not always been done). In this situation, it is clear that the xref on the deprecated term should be ignored and that only the one on the valid term should be taken into account. This is what version 0.4.3 of the SSSOM plugin does. --- src/ontology/uberon.Makefile | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/src/ontology/uberon.Makefile b/src/ontology/uberon.Makefile index 1a47eb6354..f996d1cc2f 100644 --- a/src/ontology/uberon.Makefile +++ b/src/ontology/uberon.Makefile @@ -119,7 +119,7 @@ export ROBOT_PLUGINS_DIRECTORY # Make sure the SSSOM plugin for ROBOT is available. $(TMPDIR)/plugins/sssom.jar: mkdir -p $(TMPDIR)/plugins - curl -L -o $@ https://github.com/gouttegd/sssom-java/releases/download/sssom-java-0.4.2/sssom-robot-plugin-0.4.2.jar + curl -L -o $@ https://github.com/gouttegd/sssom-java/releases/download/sssom-java-0.4.3/sssom-robot-plugin-0.4.3.jar # ----------------------------------------