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Rename the euarchontologlires and amniote subsets.
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There is no reason to have two different naming conventions for the
taxon-specific subsets (-view and -basic). Let's settle for -view.

This may require updating the PURL configuration for Uberon, if there
are people out there that are using the euarchontoglires-basic.owl
and/or amniote-basic.owl artifacts (though GitHub download stats suggest
nobody ever downloaded them).
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gouttegd committed Sep 17, 2024
1 parent da833f9 commit 62df0d4
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Showing 2 changed files with 4 additions and 4 deletions.
4 changes: 2 additions & 2 deletions src/ontology/Makefile
Original file line number Diff line number Diff line change
Expand Up @@ -10,7 +10,7 @@
# More information: https://github.com/INCATools/ontology-development-kit/

# Fingerprint of the configuration file when this Makefile was last generated
CONFIG_HASH= df7a0ce93b9cd6fe7e773a7a41a0b597562118f01ad45e6a2563fbedddaf9fe9
CONFIG_HASH= 943829f9eb8e1b8d46bf5f3f878364bb18f10e0d9eee11d7c28bfb3dfba894c7


# ----------------------------------------
Expand Down Expand Up @@ -189,7 +189,7 @@ all_imports: $(IMPORT_FILES)
# ----------------------------------------


SUBSETS = appendicular-minimal circulatory-minimal cranial-minimal cumbo digestive-minimal excretory-minimal human-view immune-minimal life-stages-composite life-stages-core life-stages-minimal merged-partonomy mouse-view musculoskeletal-minimal nephron-minimal nervous-minimal pulmonary-minimal renal-minimal reproductive-minimal sensory-minimal xenopus-view amniote-basic euarchontoglires-basic
SUBSETS = appendicular-minimal circulatory-minimal cranial-minimal cumbo digestive-minimal excretory-minimal human-view immune-minimal life-stages-composite life-stages-core life-stages-minimal merged-partonomy mouse-view musculoskeletal-minimal nephron-minimal nervous-minimal pulmonary-minimal renal-minimal reproductive-minimal sensory-minimal xenopus-view amniote-view euarchontoglires-view

SUBSET_ROOTS = $(patsubst %, $(SUBSETDIR)/%, $(SUBSETS))
SUBSET_FILES = $(foreach n,$(SUBSET_ROOTS), $(foreach f,$(FORMATS_INCL_TSV), $(n).$(f)))
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4 changes: 2 additions & 2 deletions src/ontology/uberon-odk.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -103,8 +103,8 @@ subset_group:
- id: reproductive-minimal
- id: sensory-minimal
- id: xenopus-view
- id: amniote-basic
- id: euarchontoglires-basic
- id: amniote-view
- id: euarchontoglires-view
sssom_mappingset_group:
products:
- id: fbbt
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