genomic position of cpg sites in .beta file #38
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I resolved the issue by solving the problem of init_genome |
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Hello everyone!
I am trying to work with .beta data available on GSE186458 (related to wgbstools). the data has beta values for 28,217,448 cpg sites according to docs of this wgbs_tools github. I want to know the genomic locations of these sites (preferably in hg19). I tried to use the convert function for wgbstools to do this job but was not able to init_genome hg19. I was wondering if there is a map table available somewhere I can download to know the genomic positions of .beta file cpg sites.
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