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Changelog.md

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For reasons, the versions history starts with 2.0.8

  • added agrs to manually define lastz and nextflow executables location
  • fixing issue hillerlab/make_lastz_chains#35 - the previous implementation limited the number of little chromosomes per batch based solely on the size threshold, which could lead to a system argument list overflow error when there are a vast number of small chromosomes. The updated implementation now also considers a maximum chromosome count per bucket.
  • bulky nextflow classes cooperation is wrapped into execute_nextflow_step (bulky as well, but a bit better)

2.0.9 (in progress)

  • added executor.queueSize parameter to the NF config (default to 1000)