diff --git a/build.gradle b/build.gradle
index ef878c0..31d6e85 100644
--- a/build.gradle
+++ b/build.gradle
@@ -1,7 +1,6 @@
 plugins {
   id 'com.gradleup.shadow' version '8.3.5'
   id 'application'
-  id 'groovy'
   id 'antlr'
 }
 
diff --git a/src/main/groovy/nextflow/config/dsl/ConfigOption.java b/src/main/java/nextflow/config/dsl/ConfigOption.java
similarity index 100%
rename from src/main/groovy/nextflow/config/dsl/ConfigOption.java
rename to src/main/java/nextflow/config/dsl/ConfigOption.java
diff --git a/src/main/groovy/nextflow/config/dsl/ConfigSchema.java b/src/main/java/nextflow/config/dsl/ConfigSchema.java
similarity index 100%
rename from src/main/groovy/nextflow/config/dsl/ConfigSchema.java
rename to src/main/java/nextflow/config/dsl/ConfigSchema.java
diff --git a/src/main/groovy/nextflow/config/dsl/ConfigScope.java b/src/main/java/nextflow/config/dsl/ConfigScope.java
similarity index 100%
rename from src/main/groovy/nextflow/config/dsl/ConfigScope.java
rename to src/main/java/nextflow/config/dsl/ConfigScope.java
diff --git a/src/main/groovy/nextflow/config/scopes/ApptainerConfig.java b/src/main/java/nextflow/config/scopes/ApptainerConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/ApptainerConfig.java
rename to src/main/java/nextflow/config/scopes/ApptainerConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/AwsBatchConfig.java b/src/main/java/nextflow/config/scopes/AwsBatchConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/AwsBatchConfig.java
rename to src/main/java/nextflow/config/scopes/AwsBatchConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/AwsClientConfig.java b/src/main/java/nextflow/config/scopes/AwsClientConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/AwsClientConfig.java
rename to src/main/java/nextflow/config/scopes/AwsClientConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/AwsConfig.java b/src/main/java/nextflow/config/scopes/AwsConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/AwsConfig.java
rename to src/main/java/nextflow/config/scopes/AwsConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/AzureActiveDirectoryConfig.java b/src/main/java/nextflow/config/scopes/AzureActiveDirectoryConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/AzureActiveDirectoryConfig.java
rename to src/main/java/nextflow/config/scopes/AzureActiveDirectoryConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/AzureBatchConfig.java b/src/main/java/nextflow/config/scopes/AzureBatchConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/AzureBatchConfig.java
rename to src/main/java/nextflow/config/scopes/AzureBatchConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/AzureConfig.java b/src/main/java/nextflow/config/scopes/AzureConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/AzureConfig.java
rename to src/main/java/nextflow/config/scopes/AzureConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/AzureManagedIdentityConfig.java b/src/main/java/nextflow/config/scopes/AzureManagedIdentityConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/AzureManagedIdentityConfig.java
rename to src/main/java/nextflow/config/scopes/AzureManagedIdentityConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/AzureRegistryConfig.java b/src/main/java/nextflow/config/scopes/AzureRegistryConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/AzureRegistryConfig.java
rename to src/main/java/nextflow/config/scopes/AzureRegistryConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/AzureRetryConfig.java b/src/main/java/nextflow/config/scopes/AzureRetryConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/AzureRetryConfig.java
rename to src/main/java/nextflow/config/scopes/AzureRetryConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/AzureStorageConfig.java b/src/main/java/nextflow/config/scopes/AzureStorageConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/AzureStorageConfig.java
rename to src/main/java/nextflow/config/scopes/AzureStorageConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/CharliecloudConfig.java b/src/main/java/nextflow/config/scopes/CharliecloudConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/CharliecloudConfig.java
rename to src/main/java/nextflow/config/scopes/CharliecloudConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/CondaConfig.java b/src/main/java/nextflow/config/scopes/CondaConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/CondaConfig.java
rename to src/main/java/nextflow/config/scopes/CondaConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/DagConfig.java b/src/main/java/nextflow/config/scopes/DagConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/DagConfig.java
rename to src/main/java/nextflow/config/scopes/DagConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/DockerConfig.java b/src/main/java/nextflow/config/scopes/DockerConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/DockerConfig.java
rename to src/main/java/nextflow/config/scopes/DockerConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/EnvConfig.java b/src/main/java/nextflow/config/scopes/EnvConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/EnvConfig.java
rename to src/main/java/nextflow/config/scopes/EnvConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/ExecutorConfig.java b/src/main/java/nextflow/config/scopes/ExecutorConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/ExecutorConfig.java
rename to src/main/java/nextflow/config/scopes/ExecutorConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/ExecutorRetryConfig.java b/src/main/java/nextflow/config/scopes/ExecutorRetryConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/ExecutorRetryConfig.java
rename to src/main/java/nextflow/config/scopes/ExecutorRetryConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/FusionConfig.java b/src/main/java/nextflow/config/scopes/FusionConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/FusionConfig.java
rename to src/main/java/nextflow/config/scopes/FusionConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/GoogleBatchConfig.java b/src/main/java/nextflow/config/scopes/GoogleBatchConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/GoogleBatchConfig.java
rename to src/main/java/nextflow/config/scopes/GoogleBatchConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/GoogleConfig.java b/src/main/java/nextflow/config/scopes/GoogleConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/GoogleConfig.java
rename to src/main/java/nextflow/config/scopes/GoogleConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/K8sConfig.java b/src/main/java/nextflow/config/scopes/K8sConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/K8sConfig.java
rename to src/main/java/nextflow/config/scopes/K8sConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/MailConfig.java b/src/main/java/nextflow/config/scopes/MailConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/MailConfig.java
rename to src/main/java/nextflow/config/scopes/MailConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/MailSmtpConfig.java b/src/main/java/nextflow/config/scopes/MailSmtpConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/MailSmtpConfig.java
rename to src/main/java/nextflow/config/scopes/MailSmtpConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/Manifest.java b/src/main/java/nextflow/config/scopes/Manifest.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/Manifest.java
rename to src/main/java/nextflow/config/scopes/Manifest.java
diff --git a/src/main/groovy/nextflow/config/scopes/ParamsConfig.java b/src/main/java/nextflow/config/scopes/ParamsConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/ParamsConfig.java
rename to src/main/java/nextflow/config/scopes/ParamsConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/PluginsConfig.java b/src/main/java/nextflow/config/scopes/PluginsConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/PluginsConfig.java
rename to src/main/java/nextflow/config/scopes/PluginsConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/PodmanConfig.java b/src/main/java/nextflow/config/scopes/PodmanConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/PodmanConfig.java
rename to src/main/java/nextflow/config/scopes/PodmanConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/ProcessConfig.java b/src/main/java/nextflow/config/scopes/ProcessConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/ProcessConfig.java
rename to src/main/java/nextflow/config/scopes/ProcessConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/ProfilesConfig.java b/src/main/java/nextflow/config/scopes/ProfilesConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/ProfilesConfig.java
rename to src/main/java/nextflow/config/scopes/ProfilesConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/ReportConfig.java b/src/main/java/nextflow/config/scopes/ReportConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/ReportConfig.java
rename to src/main/java/nextflow/config/scopes/ReportConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/ShifterConfig.java b/src/main/java/nextflow/config/scopes/ShifterConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/ShifterConfig.java
rename to src/main/java/nextflow/config/scopes/ShifterConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/SingularityConfig.java b/src/main/java/nextflow/config/scopes/SingularityConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/SingularityConfig.java
rename to src/main/java/nextflow/config/scopes/SingularityConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/SpackConfig.java b/src/main/java/nextflow/config/scopes/SpackConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/SpackConfig.java
rename to src/main/java/nextflow/config/scopes/SpackConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/TimelineConfig.java b/src/main/java/nextflow/config/scopes/TimelineConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/TimelineConfig.java
rename to src/main/java/nextflow/config/scopes/TimelineConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/TowerConfig.java b/src/main/java/nextflow/config/scopes/TowerConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/TowerConfig.java
rename to src/main/java/nextflow/config/scopes/TowerConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/TraceConfig.java b/src/main/java/nextflow/config/scopes/TraceConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/TraceConfig.java
rename to src/main/java/nextflow/config/scopes/TraceConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/UnscopedConfig.java b/src/main/java/nextflow/config/scopes/UnscopedConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/UnscopedConfig.java
rename to src/main/java/nextflow/config/scopes/UnscopedConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/WaveBuildConfig.java b/src/main/java/nextflow/config/scopes/WaveBuildConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/WaveBuildConfig.java
rename to src/main/java/nextflow/config/scopes/WaveBuildConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/WaveCondaConfig.java b/src/main/java/nextflow/config/scopes/WaveCondaConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/WaveCondaConfig.java
rename to src/main/java/nextflow/config/scopes/WaveCondaConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/WaveConfig.java b/src/main/java/nextflow/config/scopes/WaveConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/WaveConfig.java
rename to src/main/java/nextflow/config/scopes/WaveConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/WaveHttpConfig.java b/src/main/java/nextflow/config/scopes/WaveHttpConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/WaveHttpConfig.java
rename to src/main/java/nextflow/config/scopes/WaveHttpConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/WaveRetryConfig.java b/src/main/java/nextflow/config/scopes/WaveRetryConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/WaveRetryConfig.java
rename to src/main/java/nextflow/config/scopes/WaveRetryConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/WaveScanConfig.java b/src/main/java/nextflow/config/scopes/WaveScanConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/WaveScanConfig.java
rename to src/main/java/nextflow/config/scopes/WaveScanConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/WaveSpackConfig.java b/src/main/java/nextflow/config/scopes/WaveSpackConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/WaveSpackConfig.java
rename to src/main/java/nextflow/config/scopes/WaveSpackConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/WorkflowConfig.java b/src/main/java/nextflow/config/scopes/WorkflowConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/WorkflowConfig.java
rename to src/main/java/nextflow/config/scopes/WorkflowConfig.java
diff --git a/src/main/groovy/nextflow/config/scopes/WorkflowOutputConfig.java b/src/main/java/nextflow/config/scopes/WorkflowOutputConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/config/scopes/WorkflowOutputConfig.java
rename to src/main/java/nextflow/config/scopes/WorkflowOutputConfig.java
diff --git a/src/main/groovy/nextflow/config/v2/ConfigAppendNode.java b/src/main/java/nextflow/config/v2/ConfigAppendNode.java
similarity index 100%
rename from src/main/groovy/nextflow/config/v2/ConfigAppendNode.java
rename to src/main/java/nextflow/config/v2/ConfigAppendNode.java
diff --git a/src/main/groovy/nextflow/config/v2/ConfigAssignNode.java b/src/main/java/nextflow/config/v2/ConfigAssignNode.java
similarity index 100%
rename from src/main/groovy/nextflow/config/v2/ConfigAssignNode.java
rename to src/main/java/nextflow/config/v2/ConfigAssignNode.java
diff --git a/src/main/groovy/nextflow/config/v2/ConfigAstBuilder.java b/src/main/java/nextflow/config/v2/ConfigAstBuilder.java
similarity index 100%
rename from src/main/groovy/nextflow/config/v2/ConfigAstBuilder.java
rename to src/main/java/nextflow/config/v2/ConfigAstBuilder.java
diff --git a/src/main/groovy/nextflow/config/v2/ConfigBlockNode.java b/src/main/java/nextflow/config/v2/ConfigBlockNode.java
similarity index 100%
rename from src/main/groovy/nextflow/config/v2/ConfigBlockNode.java
rename to src/main/java/nextflow/config/v2/ConfigBlockNode.java
diff --git a/src/main/groovy/nextflow/config/v2/ConfigIncludeNode.java b/src/main/java/nextflow/config/v2/ConfigIncludeNode.java
similarity index 100%
rename from src/main/groovy/nextflow/config/v2/ConfigIncludeNode.java
rename to src/main/java/nextflow/config/v2/ConfigIncludeNode.java
diff --git a/src/main/groovy/nextflow/config/v2/ConfigIncompleteNode.java b/src/main/java/nextflow/config/v2/ConfigIncompleteNode.java
similarity index 100%
rename from src/main/groovy/nextflow/config/v2/ConfigIncompleteNode.java
rename to src/main/java/nextflow/config/v2/ConfigIncompleteNode.java
diff --git a/src/main/groovy/nextflow/config/v2/ConfigNode.java b/src/main/java/nextflow/config/v2/ConfigNode.java
similarity index 100%
rename from src/main/groovy/nextflow/config/v2/ConfigNode.java
rename to src/main/java/nextflow/config/v2/ConfigNode.java
diff --git a/src/main/groovy/nextflow/config/v2/ConfigParserPlugin.java b/src/main/java/nextflow/config/v2/ConfigParserPlugin.java
similarity index 100%
rename from src/main/groovy/nextflow/config/v2/ConfigParserPlugin.java
rename to src/main/java/nextflow/config/v2/ConfigParserPlugin.java
diff --git a/src/main/groovy/nextflow/config/v2/ConfigParserPluginFactory.java b/src/main/java/nextflow/config/v2/ConfigParserPluginFactory.java
similarity index 100%
rename from src/main/groovy/nextflow/config/v2/ConfigParserPluginFactory.java
rename to src/main/java/nextflow/config/v2/ConfigParserPluginFactory.java
diff --git a/src/main/groovy/nextflow/config/v2/ConfigStatement.java b/src/main/java/nextflow/config/v2/ConfigStatement.java
similarity index 100%
rename from src/main/groovy/nextflow/config/v2/ConfigStatement.java
rename to src/main/java/nextflow/config/v2/ConfigStatement.java
diff --git a/src/main/groovy/nextflow/config/v2/ConfigVisitor.java b/src/main/java/nextflow/config/v2/ConfigVisitor.java
similarity index 100%
rename from src/main/groovy/nextflow/config/v2/ConfigVisitor.java
rename to src/main/java/nextflow/config/v2/ConfigVisitor.java
diff --git a/src/main/groovy/nextflow/config/v2/ConfigVisitorSupport.java b/src/main/java/nextflow/config/v2/ConfigVisitorSupport.java
similarity index 100%
rename from src/main/groovy/nextflow/config/v2/ConfigVisitorSupport.java
rename to src/main/java/nextflow/config/v2/ConfigVisitorSupport.java
diff --git a/src/main/groovy/nextflow/lsp/NextflowLanguageServer.java b/src/main/java/nextflow/lsp/NextflowLanguageServer.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/NextflowLanguageServer.java
rename to src/main/java/nextflow/lsp/NextflowLanguageServer.java
diff --git a/src/main/groovy/nextflow/lsp/ast/ASTNodeCache.java b/src/main/java/nextflow/lsp/ast/ASTNodeCache.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/ast/ASTNodeCache.java
rename to src/main/java/nextflow/lsp/ast/ASTNodeCache.java
diff --git a/src/main/groovy/nextflow/lsp/ast/ASTNodeStringUtils.java b/src/main/java/nextflow/lsp/ast/ASTNodeStringUtils.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/ast/ASTNodeStringUtils.java
rename to src/main/java/nextflow/lsp/ast/ASTNodeStringUtils.java
diff --git a/src/main/groovy/nextflow/lsp/ast/ASTParentVisitor.java b/src/main/java/nextflow/lsp/ast/ASTParentVisitor.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/ast/ASTParentVisitor.java
rename to src/main/java/nextflow/lsp/ast/ASTParentVisitor.java
diff --git a/src/main/groovy/nextflow/lsp/ast/ASTUtils.java b/src/main/java/nextflow/lsp/ast/ASTUtils.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/ast/ASTUtils.java
rename to src/main/java/nextflow/lsp/ast/ASTUtils.java
diff --git a/src/main/groovy/nextflow/lsp/compiler/Compiler.java b/src/main/java/nextflow/lsp/compiler/Compiler.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/compiler/Compiler.java
rename to src/main/java/nextflow/lsp/compiler/Compiler.java
diff --git a/src/main/groovy/nextflow/lsp/compiler/FutureWarning.java b/src/main/java/nextflow/lsp/compiler/FutureWarning.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/compiler/FutureWarning.java
rename to src/main/java/nextflow/lsp/compiler/FutureWarning.java
diff --git a/src/main/groovy/nextflow/lsp/compiler/LanguageServerErrorCollector.java b/src/main/java/nextflow/lsp/compiler/LanguageServerErrorCollector.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/compiler/LanguageServerErrorCollector.java
rename to src/main/java/nextflow/lsp/compiler/LanguageServerErrorCollector.java
diff --git a/src/main/groovy/nextflow/lsp/compiler/PhaseAware.java b/src/main/java/nextflow/lsp/compiler/PhaseAware.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/compiler/PhaseAware.java
rename to src/main/java/nextflow/lsp/compiler/PhaseAware.java
diff --git a/src/main/groovy/nextflow/lsp/compiler/Phases.java b/src/main/java/nextflow/lsp/compiler/Phases.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/compiler/Phases.java
rename to src/main/java/nextflow/lsp/compiler/Phases.java
diff --git a/src/main/groovy/nextflow/lsp/compiler/RelatedInformationAware.java b/src/main/java/nextflow/lsp/compiler/RelatedInformationAware.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/compiler/RelatedInformationAware.java
rename to src/main/java/nextflow/lsp/compiler/RelatedInformationAware.java
diff --git a/src/main/groovy/nextflow/lsp/compiler/StringReaderSourceWithURI.java b/src/main/java/nextflow/lsp/compiler/StringReaderSourceWithURI.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/compiler/StringReaderSourceWithURI.java
rename to src/main/java/nextflow/lsp/compiler/StringReaderSourceWithURI.java
diff --git a/src/main/groovy/nextflow/lsp/file/FileCache.java b/src/main/java/nextflow/lsp/file/FileCache.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/file/FileCache.java
rename to src/main/java/nextflow/lsp/file/FileCache.java
diff --git a/src/main/groovy/nextflow/lsp/file/PathUtils.java b/src/main/java/nextflow/lsp/file/PathUtils.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/file/PathUtils.java
rename to src/main/java/nextflow/lsp/file/PathUtils.java
diff --git a/src/main/groovy/nextflow/lsp/services/CallHierarchyProvider.java b/src/main/java/nextflow/lsp/services/CallHierarchyProvider.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/CallHierarchyProvider.java
rename to src/main/java/nextflow/lsp/services/CallHierarchyProvider.java
diff --git a/src/main/groovy/nextflow/lsp/services/CodeLensProvider.java b/src/main/java/nextflow/lsp/services/CodeLensProvider.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/CodeLensProvider.java
rename to src/main/java/nextflow/lsp/services/CodeLensProvider.java
diff --git a/src/main/groovy/nextflow/lsp/services/CompletionProvider.java b/src/main/java/nextflow/lsp/services/CompletionProvider.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/CompletionProvider.java
rename to src/main/java/nextflow/lsp/services/CompletionProvider.java
diff --git a/src/main/groovy/nextflow/lsp/services/DefinitionProvider.java b/src/main/java/nextflow/lsp/services/DefinitionProvider.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/DefinitionProvider.java
rename to src/main/java/nextflow/lsp/services/DefinitionProvider.java
diff --git a/src/main/groovy/nextflow/lsp/services/FormattingProvider.java b/src/main/java/nextflow/lsp/services/FormattingProvider.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/FormattingProvider.java
rename to src/main/java/nextflow/lsp/services/FormattingProvider.java
diff --git a/src/main/groovy/nextflow/lsp/services/HoverProvider.java b/src/main/java/nextflow/lsp/services/HoverProvider.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/HoverProvider.java
rename to src/main/java/nextflow/lsp/services/HoverProvider.java
diff --git a/src/main/groovy/nextflow/lsp/services/LanguageService.java b/src/main/java/nextflow/lsp/services/LanguageService.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/LanguageService.java
rename to src/main/java/nextflow/lsp/services/LanguageService.java
diff --git a/src/main/groovy/nextflow/lsp/services/LinkProvider.java b/src/main/java/nextflow/lsp/services/LinkProvider.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/LinkProvider.java
rename to src/main/java/nextflow/lsp/services/LinkProvider.java
diff --git a/src/main/groovy/nextflow/lsp/services/ReferenceProvider.java b/src/main/java/nextflow/lsp/services/ReferenceProvider.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/ReferenceProvider.java
rename to src/main/java/nextflow/lsp/services/ReferenceProvider.java
diff --git a/src/main/groovy/nextflow/lsp/services/RenameProvider.java b/src/main/java/nextflow/lsp/services/RenameProvider.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/RenameProvider.java
rename to src/main/java/nextflow/lsp/services/RenameProvider.java
diff --git a/src/main/groovy/nextflow/lsp/services/SymbolProvider.java b/src/main/java/nextflow/lsp/services/SymbolProvider.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/SymbolProvider.java
rename to src/main/java/nextflow/lsp/services/SymbolProvider.java
diff --git a/src/main/groovy/nextflow/lsp/services/config/ConfigAstCache.java b/src/main/java/nextflow/lsp/services/config/ConfigAstCache.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/config/ConfigAstCache.java
rename to src/main/java/nextflow/lsp/services/config/ConfigAstCache.java
diff --git a/src/main/groovy/nextflow/lsp/services/config/ConfigCompletionProvider.java b/src/main/java/nextflow/lsp/services/config/ConfigCompletionProvider.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/config/ConfigCompletionProvider.java
rename to src/main/java/nextflow/lsp/services/config/ConfigCompletionProvider.java
diff --git a/src/main/groovy/nextflow/lsp/services/config/ConfigFormattingProvider.java b/src/main/java/nextflow/lsp/services/config/ConfigFormattingProvider.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/config/ConfigFormattingProvider.java
rename to src/main/java/nextflow/lsp/services/config/ConfigFormattingProvider.java
diff --git a/src/main/groovy/nextflow/lsp/services/config/ConfigHoverProvider.java b/src/main/java/nextflow/lsp/services/config/ConfigHoverProvider.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/config/ConfigHoverProvider.java
rename to src/main/java/nextflow/lsp/services/config/ConfigHoverProvider.java
diff --git a/src/main/groovy/nextflow/lsp/services/config/ConfigLinkProvider.java b/src/main/java/nextflow/lsp/services/config/ConfigLinkProvider.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/config/ConfigLinkProvider.java
rename to src/main/java/nextflow/lsp/services/config/ConfigLinkProvider.java
diff --git a/src/main/groovy/nextflow/lsp/services/config/ConfigSchemaVisitor.java b/src/main/java/nextflow/lsp/services/config/ConfigSchemaVisitor.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/config/ConfigSchemaVisitor.java
rename to src/main/java/nextflow/lsp/services/config/ConfigSchemaVisitor.java
diff --git a/src/main/groovy/nextflow/lsp/services/config/ConfigService.java b/src/main/java/nextflow/lsp/services/config/ConfigService.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/config/ConfigService.java
rename to src/main/java/nextflow/lsp/services/config/ConfigService.java
diff --git a/src/main/groovy/nextflow/lsp/services/config/ConfigToGroovyVisitor.java b/src/main/java/nextflow/lsp/services/config/ConfigToGroovyVisitor.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/config/ConfigToGroovyVisitor.java
rename to src/main/java/nextflow/lsp/services/config/ConfigToGroovyVisitor.java
diff --git a/src/main/groovy/nextflow/lsp/services/config/ResolveIncludeVisitor.java b/src/main/java/nextflow/lsp/services/config/ResolveIncludeVisitor.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/config/ResolveIncludeVisitor.java
rename to src/main/java/nextflow/lsp/services/config/ResolveIncludeVisitor.java
diff --git a/src/main/groovy/nextflow/lsp/services/script/MethodCallVisitor.java b/src/main/java/nextflow/lsp/services/script/MethodCallVisitor.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/script/MethodCallVisitor.java
rename to src/main/java/nextflow/lsp/services/script/MethodCallVisitor.java
diff --git a/src/main/groovy/nextflow/lsp/services/script/ResolveIncludeVisitor.java b/src/main/java/nextflow/lsp/services/script/ResolveIncludeVisitor.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/script/ResolveIncludeVisitor.java
rename to src/main/java/nextflow/lsp/services/script/ResolveIncludeVisitor.java
diff --git a/src/main/groovy/nextflow/lsp/services/script/ResolveVisitor.java b/src/main/java/nextflow/lsp/services/script/ResolveVisitor.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/script/ResolveVisitor.java
rename to src/main/java/nextflow/lsp/services/script/ResolveVisitor.java
diff --git a/src/main/groovy/nextflow/lsp/services/script/ScriptAstCache.java b/src/main/java/nextflow/lsp/services/script/ScriptAstCache.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/script/ScriptAstCache.java
rename to src/main/java/nextflow/lsp/services/script/ScriptAstCache.java
diff --git a/src/main/groovy/nextflow/lsp/services/script/ScriptCallHierarchyProvider.java b/src/main/java/nextflow/lsp/services/script/ScriptCallHierarchyProvider.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/script/ScriptCallHierarchyProvider.java
rename to src/main/java/nextflow/lsp/services/script/ScriptCallHierarchyProvider.java
diff --git a/src/main/groovy/nextflow/lsp/services/script/ScriptCodeLensProvider.java b/src/main/java/nextflow/lsp/services/script/ScriptCodeLensProvider.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/script/ScriptCodeLensProvider.java
rename to src/main/java/nextflow/lsp/services/script/ScriptCodeLensProvider.java
diff --git a/src/main/groovy/nextflow/lsp/services/script/ScriptCompletionProvider.java b/src/main/java/nextflow/lsp/services/script/ScriptCompletionProvider.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/script/ScriptCompletionProvider.java
rename to src/main/java/nextflow/lsp/services/script/ScriptCompletionProvider.java
diff --git a/src/main/groovy/nextflow/lsp/services/script/ScriptDefinitionProvider.java b/src/main/java/nextflow/lsp/services/script/ScriptDefinitionProvider.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/script/ScriptDefinitionProvider.java
rename to src/main/java/nextflow/lsp/services/script/ScriptDefinitionProvider.java
diff --git a/src/main/groovy/nextflow/lsp/services/script/ScriptFormattingProvider.java b/src/main/java/nextflow/lsp/services/script/ScriptFormattingProvider.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/script/ScriptFormattingProvider.java
rename to src/main/java/nextflow/lsp/services/script/ScriptFormattingProvider.java
diff --git a/src/main/groovy/nextflow/lsp/services/script/ScriptHoverProvider.java b/src/main/java/nextflow/lsp/services/script/ScriptHoverProvider.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/script/ScriptHoverProvider.java
rename to src/main/java/nextflow/lsp/services/script/ScriptHoverProvider.java
diff --git a/src/main/groovy/nextflow/lsp/services/script/ScriptLinkProvider.java b/src/main/java/nextflow/lsp/services/script/ScriptLinkProvider.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/script/ScriptLinkProvider.java
rename to src/main/java/nextflow/lsp/services/script/ScriptLinkProvider.java
diff --git a/src/main/groovy/nextflow/lsp/services/script/ScriptReferenceProvider.java b/src/main/java/nextflow/lsp/services/script/ScriptReferenceProvider.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/script/ScriptReferenceProvider.java
rename to src/main/java/nextflow/lsp/services/script/ScriptReferenceProvider.java
diff --git a/src/main/groovy/nextflow/lsp/services/script/ScriptService.java b/src/main/java/nextflow/lsp/services/script/ScriptService.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/script/ScriptService.java
rename to src/main/java/nextflow/lsp/services/script/ScriptService.java
diff --git a/src/main/groovy/nextflow/lsp/services/script/ScriptSymbolProvider.java b/src/main/java/nextflow/lsp/services/script/ScriptSymbolProvider.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/script/ScriptSymbolProvider.java
rename to src/main/java/nextflow/lsp/services/script/ScriptSymbolProvider.java
diff --git a/src/main/groovy/nextflow/lsp/services/script/ScriptToGroovyVisitor.java b/src/main/java/nextflow/lsp/services/script/ScriptToGroovyVisitor.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/script/ScriptToGroovyVisitor.java
rename to src/main/java/nextflow/lsp/services/script/ScriptToGroovyVisitor.java
diff --git a/src/main/groovy/nextflow/lsp/services/script/VariableScopeVisitor.java b/src/main/java/nextflow/lsp/services/script/VariableScopeVisitor.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/script/VariableScopeVisitor.java
rename to src/main/java/nextflow/lsp/services/script/VariableScopeVisitor.java
diff --git a/src/main/groovy/nextflow/lsp/services/script/dag/DataflowVisitor.java b/src/main/java/nextflow/lsp/services/script/dag/DataflowVisitor.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/script/dag/DataflowVisitor.java
rename to src/main/java/nextflow/lsp/services/script/dag/DataflowVisitor.java
diff --git a/src/main/groovy/nextflow/lsp/services/script/dag/MermaidRenderer.java b/src/main/java/nextflow/lsp/services/script/dag/MermaidRenderer.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/script/dag/MermaidRenderer.java
rename to src/main/java/nextflow/lsp/services/script/dag/MermaidRenderer.java
diff --git a/src/main/groovy/nextflow/lsp/services/util/Formatter.java b/src/main/java/nextflow/lsp/services/util/Formatter.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/util/Formatter.java
rename to src/main/java/nextflow/lsp/services/util/Formatter.java
diff --git a/src/main/groovy/nextflow/lsp/services/util/FormattingOptions.java b/src/main/java/nextflow/lsp/services/util/FormattingOptions.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/services/util/FormattingOptions.java
rename to src/main/java/nextflow/lsp/services/util/FormattingOptions.java
diff --git a/src/main/groovy/nextflow/lsp/util/DebouncingExecutor.java b/src/main/java/nextflow/lsp/util/DebouncingExecutor.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/util/DebouncingExecutor.java
rename to src/main/java/nextflow/lsp/util/DebouncingExecutor.java
diff --git a/src/main/groovy/nextflow/lsp/util/LanguageServerUtils.java b/src/main/java/nextflow/lsp/util/LanguageServerUtils.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/util/LanguageServerUtils.java
rename to src/main/java/nextflow/lsp/util/LanguageServerUtils.java
diff --git a/src/main/groovy/nextflow/lsp/util/Logger.java b/src/main/java/nextflow/lsp/util/Logger.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/util/Logger.java
rename to src/main/java/nextflow/lsp/util/Logger.java
diff --git a/src/main/groovy/nextflow/lsp/util/Positions.java b/src/main/java/nextflow/lsp/util/Positions.java
similarity index 100%
rename from src/main/groovy/nextflow/lsp/util/Positions.java
rename to src/main/java/nextflow/lsp/util/Positions.java
diff --git a/src/main/groovy/nextflow/script/dsl/Constant.java b/src/main/java/nextflow/script/dsl/Constant.java
similarity index 100%
rename from src/main/groovy/nextflow/script/dsl/Constant.java
rename to src/main/java/nextflow/script/dsl/Constant.java
diff --git a/src/main/groovy/nextflow/script/dsl/Description.java b/src/main/java/nextflow/script/dsl/Description.java
similarity index 100%
rename from src/main/groovy/nextflow/script/dsl/Description.java
rename to src/main/java/nextflow/script/dsl/Description.java
diff --git a/src/main/groovy/nextflow/script/dsl/DslScope.java b/src/main/java/nextflow/script/dsl/DslScope.java
similarity index 100%
rename from src/main/groovy/nextflow/script/dsl/DslScope.java
rename to src/main/java/nextflow/script/dsl/DslScope.java
diff --git a/src/main/groovy/nextflow/script/dsl/EntryWorkflowDsl.java b/src/main/java/nextflow/script/dsl/EntryWorkflowDsl.java
similarity index 100%
rename from src/main/groovy/nextflow/script/dsl/EntryWorkflowDsl.java
rename to src/main/java/nextflow/script/dsl/EntryWorkflowDsl.java
diff --git a/src/main/groovy/nextflow/script/dsl/FeatureFlag.java b/src/main/java/nextflow/script/dsl/FeatureFlag.java
similarity index 100%
rename from src/main/groovy/nextflow/script/dsl/FeatureFlag.java
rename to src/main/java/nextflow/script/dsl/FeatureFlag.java
diff --git a/src/main/groovy/nextflow/script/dsl/FeatureFlagDsl.java b/src/main/java/nextflow/script/dsl/FeatureFlagDsl.java
similarity index 100%
rename from src/main/groovy/nextflow/script/dsl/FeatureFlagDsl.java
rename to src/main/java/nextflow/script/dsl/FeatureFlagDsl.java
diff --git a/src/main/groovy/nextflow/script/dsl/Operator.java b/src/main/java/nextflow/script/dsl/Operator.java
similarity index 100%
rename from src/main/groovy/nextflow/script/dsl/Operator.java
rename to src/main/java/nextflow/script/dsl/Operator.java
diff --git a/src/main/groovy/nextflow/script/dsl/OutputDsl.java b/src/main/java/nextflow/script/dsl/OutputDsl.java
similarity index 100%
rename from src/main/groovy/nextflow/script/dsl/OutputDsl.java
rename to src/main/java/nextflow/script/dsl/OutputDsl.java
diff --git a/src/main/groovy/nextflow/script/dsl/ProcessDsl.java b/src/main/java/nextflow/script/dsl/ProcessDsl.java
similarity index 100%
rename from src/main/groovy/nextflow/script/dsl/ProcessDsl.java
rename to src/main/java/nextflow/script/dsl/ProcessDsl.java
diff --git a/src/main/groovy/nextflow/script/dsl/ScriptDsl.java b/src/main/java/nextflow/script/dsl/ScriptDsl.java
similarity index 100%
rename from src/main/groovy/nextflow/script/dsl/ScriptDsl.java
rename to src/main/java/nextflow/script/dsl/ScriptDsl.java
diff --git a/src/main/groovy/nextflow/script/dsl/WorkflowDsl.java b/src/main/java/nextflow/script/dsl/WorkflowDsl.java
similarity index 100%
rename from src/main/groovy/nextflow/script/dsl/WorkflowDsl.java
rename to src/main/java/nextflow/script/dsl/WorkflowDsl.java
diff --git a/src/main/groovy/nextflow/script/types/Channel.java b/src/main/java/nextflow/script/types/Channel.java
similarity index 100%
rename from src/main/groovy/nextflow/script/types/Channel.java
rename to src/main/java/nextflow/script/types/Channel.java
diff --git a/src/main/groovy/nextflow/script/types/ChannelFactory.java b/src/main/java/nextflow/script/types/ChannelFactory.java
similarity index 100%
rename from src/main/groovy/nextflow/script/types/ChannelFactory.java
rename to src/main/java/nextflow/script/types/ChannelFactory.java
diff --git a/src/main/groovy/nextflow/script/types/Duration.java b/src/main/java/nextflow/script/types/Duration.java
similarity index 100%
rename from src/main/groovy/nextflow/script/types/Duration.java
rename to src/main/java/nextflow/script/types/Duration.java
diff --git a/src/main/groovy/nextflow/script/types/Manifest.java b/src/main/java/nextflow/script/types/Manifest.java
similarity index 100%
rename from src/main/groovy/nextflow/script/types/Manifest.java
rename to src/main/java/nextflow/script/types/Manifest.java
diff --git a/src/main/groovy/nextflow/script/types/MemoryUnit.java b/src/main/java/nextflow/script/types/MemoryUnit.java
similarity index 100%
rename from src/main/groovy/nextflow/script/types/MemoryUnit.java
rename to src/main/java/nextflow/script/types/MemoryUnit.java
diff --git a/src/main/groovy/nextflow/script/types/NextflowMetadata.java b/src/main/java/nextflow/script/types/NextflowMetadata.java
similarity index 100%
rename from src/main/groovy/nextflow/script/types/NextflowMetadata.java
rename to src/main/java/nextflow/script/types/NextflowMetadata.java
diff --git a/src/main/groovy/nextflow/script/types/ParamsMap.java b/src/main/java/nextflow/script/types/ParamsMap.java
similarity index 100%
rename from src/main/groovy/nextflow/script/types/ParamsMap.java
rename to src/main/java/nextflow/script/types/ParamsMap.java
diff --git a/src/main/groovy/nextflow/script/types/TaskConfig.java b/src/main/java/nextflow/script/types/TaskConfig.java
similarity index 100%
rename from src/main/groovy/nextflow/script/types/TaskConfig.java
rename to src/main/java/nextflow/script/types/TaskConfig.java
diff --git a/src/main/groovy/nextflow/script/types/Types.java b/src/main/java/nextflow/script/types/Types.java
similarity index 100%
rename from src/main/groovy/nextflow/script/types/Types.java
rename to src/main/java/nextflow/script/types/Types.java
diff --git a/src/main/groovy/nextflow/script/types/VersionNumber.java b/src/main/java/nextflow/script/types/VersionNumber.java
similarity index 100%
rename from src/main/groovy/nextflow/script/types/VersionNumber.java
rename to src/main/java/nextflow/script/types/VersionNumber.java
diff --git a/src/main/groovy/nextflow/script/types/WorkflowMetadata.java b/src/main/java/nextflow/script/types/WorkflowMetadata.java
similarity index 100%
rename from src/main/groovy/nextflow/script/types/WorkflowMetadata.java
rename to src/main/java/nextflow/script/types/WorkflowMetadata.java
diff --git a/src/main/groovy/nextflow/script/v2/ASTHelpers.java b/src/main/java/nextflow/script/v2/ASTHelpers.java
similarity index 100%
rename from src/main/groovy/nextflow/script/v2/ASTHelpers.java
rename to src/main/java/nextflow/script/v2/ASTHelpers.java
diff --git a/src/main/groovy/nextflow/script/v2/AssignmentExpression.java b/src/main/java/nextflow/script/v2/AssignmentExpression.java
similarity index 100%
rename from src/main/groovy/nextflow/script/v2/AssignmentExpression.java
rename to src/main/java/nextflow/script/v2/AssignmentExpression.java
diff --git a/src/main/groovy/nextflow/script/v2/FeatureFlagNode.java b/src/main/java/nextflow/script/v2/FeatureFlagNode.java
similarity index 100%
rename from src/main/groovy/nextflow/script/v2/FeatureFlagNode.java
rename to src/main/java/nextflow/script/v2/FeatureFlagNode.java
diff --git a/src/main/groovy/nextflow/script/v2/FunctionNode.java b/src/main/java/nextflow/script/v2/FunctionNode.java
similarity index 100%
rename from src/main/groovy/nextflow/script/v2/FunctionNode.java
rename to src/main/java/nextflow/script/v2/FunctionNode.java
diff --git a/src/main/groovy/nextflow/script/v2/GroovydocManager.java b/src/main/java/nextflow/script/v2/GroovydocManager.java
similarity index 100%
rename from src/main/groovy/nextflow/script/v2/GroovydocManager.java
rename to src/main/java/nextflow/script/v2/GroovydocManager.java
diff --git a/src/main/groovy/nextflow/script/v2/IncludeNode.java b/src/main/java/nextflow/script/v2/IncludeNode.java
similarity index 100%
rename from src/main/groovy/nextflow/script/v2/IncludeNode.java
rename to src/main/java/nextflow/script/v2/IncludeNode.java
diff --git a/src/main/groovy/nextflow/script/v2/IncludeVariable.java b/src/main/java/nextflow/script/v2/IncludeVariable.java
similarity index 100%
rename from src/main/groovy/nextflow/script/v2/IncludeVariable.java
rename to src/main/java/nextflow/script/v2/IncludeVariable.java
diff --git a/src/main/groovy/nextflow/script/v2/IncompleteNode.java b/src/main/java/nextflow/script/v2/IncompleteNode.java
similarity index 100%
rename from src/main/groovy/nextflow/script/v2/IncompleteNode.java
rename to src/main/java/nextflow/script/v2/IncompleteNode.java
diff --git a/src/main/groovy/nextflow/script/v2/InvalidDeclaration.java b/src/main/java/nextflow/script/v2/InvalidDeclaration.java
similarity index 100%
rename from src/main/groovy/nextflow/script/v2/InvalidDeclaration.java
rename to src/main/java/nextflow/script/v2/InvalidDeclaration.java
diff --git a/src/main/groovy/nextflow/script/v2/OutputNode.java b/src/main/java/nextflow/script/v2/OutputNode.java
similarity index 100%
rename from src/main/groovy/nextflow/script/v2/OutputNode.java
rename to src/main/java/nextflow/script/v2/OutputNode.java
diff --git a/src/main/groovy/nextflow/script/v2/ParamNode.java b/src/main/java/nextflow/script/v2/ParamNode.java
similarity index 100%
rename from src/main/groovy/nextflow/script/v2/ParamNode.java
rename to src/main/java/nextflow/script/v2/ParamNode.java
diff --git a/src/main/groovy/nextflow/script/v2/ProcessNode.java b/src/main/java/nextflow/script/v2/ProcessNode.java
similarity index 100%
rename from src/main/groovy/nextflow/script/v2/ProcessNode.java
rename to src/main/java/nextflow/script/v2/ProcessNode.java
diff --git a/src/main/groovy/nextflow/script/v2/ScriptAstBuilder.java b/src/main/java/nextflow/script/v2/ScriptAstBuilder.java
similarity index 100%
rename from src/main/groovy/nextflow/script/v2/ScriptAstBuilder.java
rename to src/main/java/nextflow/script/v2/ScriptAstBuilder.java
diff --git a/src/main/groovy/nextflow/script/v2/ScriptExpressionTransformer.java b/src/main/java/nextflow/script/v2/ScriptExpressionTransformer.java
similarity index 100%
rename from src/main/groovy/nextflow/script/v2/ScriptExpressionTransformer.java
rename to src/main/java/nextflow/script/v2/ScriptExpressionTransformer.java
diff --git a/src/main/groovy/nextflow/script/v2/ScriptNode.java b/src/main/java/nextflow/script/v2/ScriptNode.java
similarity index 100%
rename from src/main/groovy/nextflow/script/v2/ScriptNode.java
rename to src/main/java/nextflow/script/v2/ScriptNode.java
diff --git a/src/main/groovy/nextflow/script/v2/ScriptParserPlugin.java b/src/main/java/nextflow/script/v2/ScriptParserPlugin.java
similarity index 100%
rename from src/main/groovy/nextflow/script/v2/ScriptParserPlugin.java
rename to src/main/java/nextflow/script/v2/ScriptParserPlugin.java
diff --git a/src/main/groovy/nextflow/script/v2/ScriptParserPluginFactory.java b/src/main/java/nextflow/script/v2/ScriptParserPluginFactory.java
similarity index 100%
rename from src/main/groovy/nextflow/script/v2/ScriptParserPluginFactory.java
rename to src/main/java/nextflow/script/v2/ScriptParserPluginFactory.java
diff --git a/src/main/groovy/nextflow/script/v2/ScriptVisitor.java b/src/main/java/nextflow/script/v2/ScriptVisitor.java
similarity index 100%
rename from src/main/groovy/nextflow/script/v2/ScriptVisitor.java
rename to src/main/java/nextflow/script/v2/ScriptVisitor.java
diff --git a/src/main/groovy/nextflow/script/v2/ScriptVisitorSupport.java b/src/main/java/nextflow/script/v2/ScriptVisitorSupport.java
similarity index 100%
rename from src/main/groovy/nextflow/script/v2/ScriptVisitorSupport.java
rename to src/main/java/nextflow/script/v2/ScriptVisitorSupport.java
diff --git a/src/main/groovy/nextflow/script/v2/WorkflowNode.java b/src/main/java/nextflow/script/v2/WorkflowNode.java
similarity index 100%
rename from src/main/groovy/nextflow/script/v2/WorkflowNode.java
rename to src/main/java/nextflow/script/v2/WorkflowNode.java