run.hoc

{load_file("defvar.hoc")}
strdef parameters
parameters="./parameters/Control.hoc"

default_var("coredat", "coredat")
default_var("outdir", ".")
default_var("mytstop", 150)
default_var("coreneuron", 0)
default_var("gpu", 0)
default_var("mytstop", 150)
default_var("dumpmodel", 0)
// this is a clumsy way of reducing the size of the model for testing purposes
// if you set it to a value other than -1 you should assume the model has no
// scientific value.
default_var("max_cells_per_type", -1)

use_coreneuron = coreneuron
use_gpu = gpu
dump_coreneuron_model = dumpmodel
max_cells_per_type_to_load = max_cells_per_type

// create directory for writing dataset
{
    outdir = getcwd()
    sprint(coredat, "%s/%s", outdir, coredat)
    nrnpython("from commonutils import mkdir_p")
    strdef cmd
    sprint(cmd, "mkdir_p('%s')", coredat)
    nrnpython(cmd)
    sprint(cmd, "mkdir_p('%s/results')", outdir)
    nrnpython(cmd)
}

load_file("main.hoc")