generated from neurogenomics/templateR
-
Notifications
You must be signed in to change notification settings - Fork 1
/
NAMESPACE
87 lines (86 loc) · 1.9 KB
/
NAMESPACE
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
# Generated by roxygen2: do not edit by hand
export(add_ancestors)
export(add_db)
export(add_hoverboxes)
export(add_ontology_metadata)
export(cache_clear)
export(cache_dir)
export(cache_files)
export(cache_save)
export(dt_to_matrix)
export(example_dat)
export(filter_dt)
export(filter_graph)
export(filter_kg)
export(filter_ontology)
export(get_alphamissense)
export(get_clinvar)
export(get_data_package)
export(get_definitions)
export(get_gencc)
export(get_gene_lengths)
export(get_genes_disease)
export(get_graph_colnames)
export(get_monarch)
export(get_monarch_files)
export(get_monarch_kg)
export(get_monarch_models)
export(get_mondo_maps)
export(get_ols_options)
export(get_ontology)
export(get_ontology_descendants)
export(get_ontology_dict)
export(get_ontology_levels)
export(get_opentargets)
export(get_pli)
export(get_prevalence)
export(get_ttd)
export(get_upheno)
export(get_version)
export(graph_to_dt)
export(graph_to_ggnetwork)
export(graph_to_plotly)
export(kde_surface)
export(link_monarch)
export(map_colors)
export(map_genes_dt)
export(map_genes_monarch)
export(map_mondo)
export(map_ontology_terms)
export(map_upheno)
export(map_upheno_data)
export(map_variants)
export(ontology_to)
export(plot_clinvar)
export(plot_ggnetwork)
export(plot_graph_3d)
export(plot_graph_visnetwork)
export(plot_ontology)
export(plot_ontology_heatmap)
export(plot_save)
export(plot_upheno)
export(prune_ancestors)
export(query_oard)
export(set_cores)
export(to_graph)
export(unlist_dt)
import(BiocParallel)
import(data.table)
import(orthogene)
import(pals)
import(rols)
import(rvest)
import(simona)
import(tidygraph)
importFrom(Matrix,colSums)
importFrom(methods,show)
importFrom(orthogene,map_genes)
importFrom(parallel,detectCores)
importFrom(simona,LCA_depth)
importFrom(stats,as.dist)
importFrom(stats,cutree)
importFrom(stats,hclust)
importFrom(stats,sd)
importFrom(stringr,str_wrap)
importFrom(utils,data)
importFrom(utils,download.file)