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Retroactively fix clinical data columns for cBioPortal #271

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ckandoth opened this issue Jul 22, 2019 · 0 comments

Open

2 of 3 tasks

Retroactively fix clinical data columns for cBioPortal #271

ckandoth opened this issue Jul 22, 2019 · 0 comments

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ckandoth commented Jul 22, 2019 •

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Use http://oncotree.mskcc.org/cdd/api/ to update column header descriptions and metadata.
Swap SAMPLE_TYPE and SAMPLE_CLASS if appropriate. Refer to https://github.com/mskcc/roslin-internal-services/issues/6 for description of the problem.
Add PROJECT_CODE column listing IGO request ID.

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ckandoth assigned timosong

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