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@ielis ielis released this 27 Apr 20:29
· 100 commits to master since this release
v1.0.0
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Learn about vigilant mode.

The manuscript version

  • squirls-cli
    • allow to block-compress (bgzip) the annotated VCF on the fly by using -f vcfgz option
    • do not fail due to an exception being thrown by Jannovar when annotating a VCF file
    • do not sort variants in the VCF output if the required header lines are missing
    • allow precalculating scores for regions of interest with precalculate command
    • use vmvt v0.9.4
  • squirls-ingest
    • prevent ingesting transcripts with duplicate ENST id
Assets 3
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