Make release v1.0.0-RC1

monarch-initiative · Oct 12, 2020 · db9797b · db9797b
1 parent 345cd2a
commit db9797b
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Showing 8 changed files with 14 additions and 19 deletions.
diff --git a/docs/conf.py b/docs/conf.py
@@ -24,9 +24,9 @@
 author = 'Daniel Danis, Peter N Robinson'
 
 # The short X.Y version
-version = ''
+version = '1.0.0-RC1'
 # The full version, including alpha/beta/rc tags
-release = 'v1.0.0'
+release = 'v1.0.0-RC1'
 
 
 # -- General configuration ---------------------------------------------------

diff --git a/docs/index.rst b/docs/index.rst
@@ -1,14 +1,7 @@
-.. Squirls documentation master file, created by
-sphinx-quickstart on Mon Oct 12 10:40:04 2020.
-You can adapt this file completely to your liking, but it should at least
-contain the root `toctree` directive.
-
-Squirls: Super-quick Information Content and Random Forest Learning for Splice Variants
-=======================================================================================
-
-
 Squirls
-~~~~~~~
+=======
+
+Super-quick Information Content and Random Forest Learning for Splice Variants.
 
 This application performs prediction of deleteriousness of genomic variants with respect to mRNA splicing.
 

diff --git a/pom.xml b/pom.xml
@@ -7,7 +7,7 @@
     <groupId>org.monarchinitiative.squirls</groupId>
     <artifactId>Squirls</artifactId>
     <packaging>pom</packaging>
-    <version>1.3.0-RC3</version>
+    <version>1.0.0-RC1</version>
     <modules>
         <module>squirls-core</module>
         <module>squirls-ingest</module>
@@ -20,7 +20,9 @@
         <project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
         <project.reporting.outputEncoding>UTF-8</project.reporting.outputEncoding>
         <java.version>11</java.version>
+
         <hyperutil.version>0.1.3</hyperutil.version>
+        <vmvt.version>0.8.5</vmvt.version>
         <htsjdk.version>2.19.0</htsjdk.version>
         <jannovar.version>0.29</jannovar.version>
         <argparse.version>0.8.1</argparse.version>

diff --git a/squirls-cli/pom.xml b/squirls-cli/pom.xml
@@ -5,7 +5,7 @@
     <parent>
         <artifactId>Squirls</artifactId>
         <groupId>org.monarchinitiative.squirls</groupId>
-        <version>1.3.0-RC3</version>
+        <version>1.0.0-RC1</version>
     </parent>
     <modelVersion>4.0.0</modelVersion>
 
@@ -64,7 +64,7 @@
         <dependency>
             <groupId>org.monarchinitiative.vmvt</groupId>
             <artifactId>vmvt-core</artifactId>
-            <version>0.8.5</version>
+            <version>${vmvt.version}</version>
         </dependency>
 
         <!--  TEST DEPENDENCIES  -->

diff --git a/squirls-core/pom.xml b/squirls-core/pom.xml
@@ -5,7 +5,7 @@
     <parent>
         <artifactId>Squirls</artifactId>
         <groupId>org.monarchinitiative.squirls</groupId>
-        <version>1.3.0-RC3</version>
+        <version>1.0.0-RC1</version>
     </parent>
     <modelVersion>4.0.0</modelVersion>
 

diff --git a/squirls-ingest/pom.xml b/squirls-ingest/pom.xml
@@ -5,7 +5,7 @@
     <parent>
         <artifactId>Squirls</artifactId>
         <groupId>org.monarchinitiative.squirls</groupId>
-        <version>1.3.0-RC3</version>
+        <version>1.0.0-RC1</version>
     </parent>
     <modelVersion>4.0.0</modelVersion>
 

diff --git a/squirls-spring-boot-autoconfigure/pom.xml b/squirls-spring-boot-autoconfigure/pom.xml
@@ -5,7 +5,7 @@
     <parent>
         <artifactId>Squirls</artifactId>
         <groupId>org.monarchinitiative.squirls</groupId>
-        <version>1.3.0-RC3</version>
+        <version>1.0.0-RC1</version>
     </parent>
     <modelVersion>4.0.0</modelVersion>
 

diff --git a/squirls-spring-boot-starter/pom.xml b/squirls-spring-boot-starter/pom.xml
@@ -5,7 +5,7 @@
     <parent>
         <artifactId>Squirls</artifactId>
         <groupId>org.monarchinitiative.squirls</groupId>
-        <version>1.3.0-RC3</version>
+        <version>1.0.0-RC1</version>
     </parent>
     <modelVersion>4.0.0</modelVersion>