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milaboratory / mixcr Public

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--lenient-bam-validation added to analyze #3417

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--lenient-bam-validation added to analyze

--lenient-bam-validation added to analyze #3417

Summary
Jobs
- init
- Init
  
  :build
  
  :setup tests matrix
  
  :test (unit)
  
  archive
  
  docker
  
  library
  
  :test (int) (case-IR)
  
  :test (int) (case-bam)
  
  :test (int) (case-base_build_trees)
  
  :test (int) (case-base_single_cell)
  
  :test (int) (case-build_trees_reproducible_hash)
  
  :test (int) (case-buld_trees_on_data_with_a_hole)
  
  :test (int) (case-export_preset)
  
  :test (int) (case-gf_intersection)
  
  :test (int) (case-parse-header)
  
  :test (int) (case-qc)
  
  :test (int) (case-regression_clna_0)
  
  :test (int) (case-regression_clna_1)
  
  :test (int) (case-regression_clna_2)
  
  :test (int) (case-regression_clna_3)
  
  :test (int) (case-regression_clna_4)
  
  :test (int) (case-regression_clns_0)
  
  :test (int) (case-regression_clns_1)
  
  :test (int) (case-regression_clns_2)
  
  :test (int) (case-regression_clns_3)
  
  :test (int) (case-regression_clns_4)
  
  :test (int) (case-regression_shmt_0)
  
  :test (int) (case-regression_shmt_1)
  
  :test (int) (case-regression_shmt_2)
  
  :test (int) (case-regression_shmt_3)
  
  :test (int) (case-regression_shmt_4)
  
  :test (int) (case-regression_vdjca_0)
  
  :test (int) (case-regression_vdjca_1)
  
  :test (int) (case-regression_vdjca_2)
  
  :test (int) (case-regression_vdjca_3)
  
  :test (int) (case-regression_vdjca_4)
  
  :test (int) (case-reset_preset)
  
  :test (int) (case-reset_whitelist)
  
  :test (int) (case-search_for_alleles_on_broken_library)
  
  :test (int) (case-single_cell_reproducible_hash)
  
  :test (int) (case-single_cell_vdjcacontigs_reproducible_hash)
  
  :test (int) (case-slice)
  
  :test (int) (case-tag_validation)
  
  :test (int) (case-usage_of_template)
  
  :test (int) (case-use_arguments_from_file_on_export)
  
  :test (int) (case-use_old_version_preset)
  
  :test (int) (case001)
  
  :test (int) (case002)
  
  :test (int) (case003)
  
  :test (int) (case004)
  
  :test (int) (case005)
  
  :test (int) (case006)
  
  :test (int) (case007)
  
  :test (int) (case008)
  
  :test (int) (case009)
  
  :test (int) (case011)
  
  :test (int) (case012)
  
  :test (int) (case013)
  
  :test (int) (case017)
  
  :test (int) (case019_multiple_cell_barcodes)
  
  :test (int) (case020-umi-consensus)
  
  :test (int) (case022-sample-barcode)
  
  :test (int) (case023-exom-seq)
  
  :test (int) (case024-sample-table-mixin)
  
  :test (int) (case025-sample-from-file-name)
  
  :test (int) (case026-sample-sheet-as-input)
  
  :test (int) (case027-buildLibrary-chimeric)
  
  :test (int) (case028-buildLibrary-custom)
  
  :test (int) (case029-two-level-split)
  
  :test (int) (case_localPreset)
  
  :test (reg) (baseBuldTrees)
  
  :test (reg) (baseSingleCell)
  
  :test (reg) (export-meta)
  
  notify unit test
  
  notify archive build
  
  sign-archive
  
  update the latest build link on the CDN
  
  notify docker build
  
  notify library build
  
  can release
  
  notify integration test
  
  :test (reg) create pr
  
  notify regression test
  
  notify sign archive build
  
  confirm release
  
  notify regression tests changes
  
  fail workflow on regression tests changes
  
  notify review required
  
  github release
  
  s3 archive release
  
  library release
  
  notify release
Run details
- Usage
- Workflow file

Usage Workflow file

Annotations

1 warning and 1 notice

Post Run milaboratory/github-ci/blocks/java/build@v4

This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.

Run milaboratory/github-ci/blocks/java/publish/docker@v4

Pushed Docker tags: ghcr.io/milaboratory/mixcr/mixcr:4.7.0-135-develop ghcr.io/milaboratory/mixcr/mixcr:latest-develop

run / docker

succeeded Nov 22, 2024 in 4m 58s

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