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Merge pull request #1829 from milaboratory/fixes #3370

Merge pull request #1829 from milaboratory/fixes

Merge pull request #1829 from milaboratory/fixes #3370

Triggered via push October 24, 2024 12:07
Status Success
Total duration 13m 18s
Artifacts 3

build.yaml

on: push
run  /  notify archive build
11s
run / notify archive build
run  /  update the latest build link on the CDN
6s
run / update the latest build link on the CDN
Matrix: run / :test (reg)
Matrix: run / :test (int)
run  /  notify docker build
14s
run / notify docker build
run  /  can release
0s
run / can release
run  /  notify library build
10s
run / notify library build
run  /  notify unit test
35s
run / notify unit test
run  /  notify sign archive build
11s
run / notify sign archive build
run  /  :test (reg) create pr
16s
run / :test (reg) create pr
run  /  notify regression test
11s
run / notify regression test
run  /  notify integration test
11s
run / notify integration test
run  /  confirm release
0s
run / confirm release
run  /  notify regression tests changes
0s
run / notify regression tests changes
run  /  fail workflow on regression tests changes
0s
run / fail workflow on regression tests changes
run  /  notify review required
0s
run / notify review required
run  /  github release
0s
run / github release
run  /  s3 archive release
0s
run / s3 archive release
run  /  library release
0s
run / library release
run  /  notify release
0s
run / notify release
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Annotations

75 warnings and 2 notices
run / :build
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / library
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case002)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case017)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-usage_of_template)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case011)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-use_arguments_from_file_on_export)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-use_old_version_preset)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case006)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case020-umi-consensus)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case012)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-qc)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-regression_shmt_3)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case027-buildLibrary-chimeric)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case013)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (reg) (export-meta)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case003)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-regression_shmt_2)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-gf_intersection)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-parse-header)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case001)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-export_preset)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case029-two-level-split)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case028-buildLibrary-custom)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case022-sample-barcode)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-reset_preset)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-IR)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case025-sample-from-file-name)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-tag_validation)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case023-exom-seq)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / archive
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case026-sample-sheet-as-input)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-regression_shmt_4)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case_localPreset)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case007)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case019_multiple_cell_barcodes)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case024-sample-table-mixin)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (reg) (baseSingleCell)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-base_single_cell)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-regression_shmt_0)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-reset_whitelist)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-regression_shmt_1)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-bam)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-regression_clns_3)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-regression_clns_4)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-single_cell_reproducible_hash)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-slice)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-single_cell_vdjcacontigs_reproducible_hash)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-regression_clns_2)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-regression_vdjca_4)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-regression_clns_0)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-regression_clns_1)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case009)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-regression_clna_1)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case008)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-regression_vdjca_3)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-regression_vdjca_0)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / sign-archive
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
run / sign-archive
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
run / :test (int) (case-regression_vdjca_1)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-buld_trees_on_data_with_a_hole)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-regression_clna_3)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-regression_clna_2)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / docker
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-regression_vdjca_2)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (reg) (baseBuldTrees)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-regression_clna_4)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-search_for_alleles_on_broken_library)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-regression_clna_0)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-build_trees_reproducible_hash)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case005)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (unit)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (unit)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case-base_build_trees)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
run / :test (int) (case004)
This job uses deprecated functionality from the 'gradle/actions/setup-gradle' action. Consult the Job Summary for more details.
init
Current commit seems to have no tag. Version number will be generated. command "git 'describe' '--tags' '--abbrev=0' '--exact-match' 'HEAD'" failed with code '128': fatal: no tag exactly matches 'cc74062915872147d746b2ce9311f5f38d7cc08b'
run / docker
Pushed Docker tags: ghcr.io/milaboratory/mixcr/mixcr:4.7.0-129-develop ghcr.io/milaboratory/mixcr/mixcr:latest-develop

Artifacts

Produced during runtime
Name Size
context
352 Bytes
mixcr Expired
102 MB
test-regression
132 Bytes