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A couple more possible ideas (though note I've not read the code in this area, so bear that in mind):
run checks in parallel
run all the checks continuously within the pod and report current result via an http server (or equivalently a prom metrics endpoint) - so checking the overall connectivity map becomes a single curl to each pod
run a pod for each check that continuously does the check and report success/failure via its Readiness check? Then checking the overall connectivity map is simply a kubectl get po -A (or equivalent api call)
client-side:
server-side:
ideas:
kubectl exec
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